Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01097

Experiment: MGL

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX19_01095 and MPMX19_01096 are separated by 57 nucleotidesMPMX19_01096 and MPMX19_01097 are separated by 356 nucleotidesMPMX19_01097 and MPMX19_01098 are separated by 194 nucleotides MPMX19_01095: MPMX19_01095 - Sulfate/thiosulfate import ATP-binding protein CysA, at 1,130,584 to 1,131,705 _01095 MPMX19_01096: MPMX19_01096 - hypothetical protein, at 1,131,763 to 1,132,083 _01096 MPMX19_01097: MPMX19_01097 - hypothetical protein, at 1,132,440 to 1,132,811 _01097 MPMX19_01098: MPMX19_01098 - Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha, at 1,133,006 to 1,134,019 _01098 Position (kb) 1132 1133Strain fitness (log2 ratio) -4 -3 -2 -1 0 1at 1131.672 kb on - strandat 1131.701 kb on + strandat 1131.701 kb on + strandat 1131.701 kb on + strandat 1131.701 kb on + strandat 1131.701 kb on + strandat 1131.701 kb on + strandat 1131.701 kb on + strandat 1131.701 kb on + strandat 1131.701 kb on + strandat 1131.701 kb on + strandat 1131.701 kb on + strandat 1131.701 kb on + strandat 1131.701 kb on + strandat 1131.701 kb on + strandat 1131.701 kb on + strandat 1131.701 kb on + strandat 1131.701 kb on + strandat 1131.701 kb on + strandat 1131.701 kb on + strandat 1131.701 kb on + strandat 1131.701 kb on + strandat 1131.701 kb on + strandat 1131.701 kb on + strandat 1131.702 kb on - strandat 1131.702 kb on - strandat 1131.702 kb on - strandat 1131.702 kb on - strandat 1131.702 kb on - strandat 1131.702 kb on - strandat 1131.702 kb on - strandat 1131.702 kb on - strandat 1131.702 kb on - strandat 1131.702 kb on - strandat 1131.702 kb on - strandat 1131.702 kb on - strandat 1131.702 kb on - strandat 1131.702 kb on - strandat 1131.702 kb on - strandat 1131.702 kb on - strandat 1131.702 kb on - strandat 1131.702 kb on - strandat 1131.702 kb on - strandat 1131.702 kb on - strandat 1131.702 kb on - strandat 1131.702 kb on - strandat 1131.702 kb on - strandat 1131.702 kb on - strandat 1131.702 kb on - strandat 1131.702 kb on - strandat 1131.702 kb on - strandat 1131.703 kb on + strandat 1131.703 kb on + strandat 1131.703 kb on + strandat 1131.703 kb on + strandat 1131.704 kb on - strandat 1131.704 kb on - strandat 1131.704 kb on - strandat 1131.704 kb on - strandat 1131.704 kb on - strandat 1131.704 kb on - strandat 1131.758 kb on + strandat 1131.764 kb on + strandat 1131.765 kb on - strandat 1131.765 kb on - strandat 1132.138 kb on + strandat 1132.139 kb on - strandat 1132.139 kb on - strandat 1132.173 kb on + strandat 1132.173 kb on + strandat 1132.173 kb on + strandat 1132.173 kb on + strandat 1132.173 kb on + strandat 1132.173 kb on + strandat 1132.173 kb on + strandat 1132.174 kb on - strandat 1132.174 kb on - strandat 1132.174 kb on - strandat 1132.174 kb on - strandat 1132.174 kb on - strandat 1132.174 kb on - strandat 1132.174 kb on - strandat 1132.174 kb on - strandat 1132.174 kb on - strandat 1132.174 kb on - strandat 1132.174 kb on - strandat 1132.174 kb on - strandat 1132.222 kb on + strandat 1132.222 kb on + strandat 1132.222 kb on + strandat 1132.223 kb on - strandat 1132.223 kb on - strandat 1132.223 kb on - strandat 1132.223 kb on - strandat 1132.223 kb on - strandat 1132.223 kb on - strandat 1132.223 kb on - strandat 1132.223 kb on - strandat 1132.223 kb on - strandat 1132.336 kb on + strandat 1132.336 kb on + strandat 1132.336 kb on + strandat 1132.337 kb on - strandat 1132.762 kb on + strand, within MPMX19_01097at 1132.809 kb on + strandat 1132.810 kb on - strandat 1132.810 kb on - strandat 1132.810 kb on - strandat 1132.854 kb on - strandat 1132.897 kb on + strandat 1132.897 kb on + strandat 1132.897 kb on + strandat 1132.911 kb on + strandat 1132.911 kb on + strandat 1133.180 kb on + strand, within MPMX19_01098

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Per-strain Table

Position Strand Gene LocusTag Fraction MGL
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1,131,672 - -0.7
1,131,701 + -1.7
1,131,701 + -0.5
1,131,701 + -1.4
1,131,701 + -1.1
1,131,701 + -0.4
1,131,701 + -1.4
1,131,701 + -0.0
1,131,701 + -1.8
1,131,701 + -0.9
1,131,701 + -0.3
1,131,701 + -2.3
1,131,701 + -1.1
1,131,701 + -0.3
1,131,701 + -1.0
1,131,701 + +0.1
1,131,701 + +1.0
1,131,701 + -1.4
1,131,701 + -0.7
1,131,701 + -0.1
1,131,701 + -1.9
1,131,701 + -2.2
1,131,701 + -3.9
1,131,701 + -2.2
1,131,702 - -2.1
1,131,702 - +0.7
1,131,702 - -0.9
1,131,702 - -0.5
1,131,702 - -0.7
1,131,702 - -1.0
1,131,702 - -0.2
1,131,702 - +0.3
1,131,702 - -1.1
1,131,702 - -1.5
1,131,702 - -0.4
1,131,702 - -1.0
1,131,702 - -1.4
1,131,702 - +0.3
1,131,702 - -2.1
1,131,702 - -1.2
1,131,702 - -0.3
1,131,702 - -0.2
1,131,702 - -0.5
1,131,702 - -2.8
1,131,702 - -0.5
1,131,702 - -1.0
1,131,702 - +0.1
1,131,702 - -0.2
1,131,702 - -2.2
1,131,702 - -0.6
1,131,702 - -0.9
1,131,703 + -0.6
1,131,703 + +0.9
1,131,703 + -0.4
1,131,703 + -1.3
1,131,704 - +0.7
1,131,704 - -1.7
1,131,704 - -1.1
1,131,704 - -0.5
1,131,704 - -0.3
1,131,704 - +1.6
1,131,758 + +0.5
1,131,764 + -1.7
1,131,765 - -0.5
1,131,765 - -2.1
1,132,138 + -0.5
1,132,139 - -0.7
1,132,139 - +0.7
1,132,173 + -0.0
1,132,173 + -1.9
1,132,173 + -0.7
1,132,173 + -0.8
1,132,173 + -0.7
1,132,173 + -0.5
1,132,173 + -1.1
1,132,174 - -0.2
1,132,174 - -1.3
1,132,174 - -1.1
1,132,174 - -1.4
1,132,174 - -0.7
1,132,174 - +1.1
1,132,174 - -0.5
1,132,174 - -1.8
1,132,174 - -1.0
1,132,174 - -0.1
1,132,174 - -1.0
1,132,174 - -1.8
1,132,222 + -1.5
1,132,222 + +0.3
1,132,222 + +0.7
1,132,223 - -0.3
1,132,223 - -0.1
1,132,223 - +1.0
1,132,223 - +0.1
1,132,223 - -1.1
1,132,223 - +0.3
1,132,223 - -1.6
1,132,223 - -0.0
1,132,223 - -0.4
1,132,336 + -1.1
1,132,336 + +0.4
1,132,336 + -0.4
1,132,337 - -1.7
1,132,762 + MPMX19_01097 0.87 +0.5
1,132,809 + +1.7
1,132,810 - -2.3
1,132,810 - -1.0
1,132,810 - +1.1
1,132,854 - -0.3
1,132,897 + +0.3
1,132,897 + -0.7
1,132,897 + -0.0
1,132,911 + -0.7
1,132,911 + -1.3
1,133,180 + MPMX19_01098 0.17 -1.5

Or see this region's nucleotide sequence