Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_01080 and MPMX19_01081 are separated by 49 nucleotides MPMX19_01081 and MPMX19_01082 are separated by 4 nucleotides MPMX19_01082 and MPMX19_01083 are separated by 13 nucleotides MPMX19_01083 and MPMX19_01084 overlap by 4 nucleotides
MPMX19_01080: MPMX19_01080 - Peroxiredoxin, at 1,117,576 to 1,118,058
_01080
MPMX19_01081: MPMX19_01081 - Ribonuclease HI, at 1,118,108 to 1,118,584
_01081
MPMX19_01082: MPMX19_01082 - Homoserine kinase, at 1,118,589 to 1,119,572
_01082
MPMX19_01083: MPMX19_01083 - hypothetical protein, at 1,119,586 to 1,120,419
_01083
MPMX19_01084: MPMX19_01084 - 3'(2'),5'-bisphosphate nucleotidase CysQ, at 1,120,416 to 1,121,192
_01084
Position (kb)
1118
1119
1120 Strain fitness (log2 ratio)
-1
0
1
2
3 at 1117.596 kb on + strand at 1117.805 kb on + strand, within MPMX19_01080 at 1117.805 kb on + strand, within MPMX19_01080 at 1118.337 kb on + strand, within MPMX19_01081 at 1118.337 kb on + strand, within MPMX19_01081 at 1118.448 kb on + strand, within MPMX19_01081 at 1118.623 kb on + strand at 1118.623 kb on + strand at 1118.624 kb on - strand at 1118.624 kb on - strand at 1118.624 kb on - strand at 1119.632 kb on + strand at 1119.632 kb on + strand at 1119.632 kb on + strand at 1119.633 kb on - strand at 1119.633 kb on - strand at 1119.633 kb on - strand at 1119.633 kb on - strand at 1119.633 kb on - strand at 1119.633 kb on - strand at 1119.633 kb on - strand at 1119.633 kb on - strand at 1119.635 kb on + strand at 1119.635 kb on + strand at 1119.635 kb on + strand at 1119.635 kb on + strand at 1119.636 kb on - strand at 1119.636 kb on - strand at 1119.998 kb on + strand, within MPMX19_01083 at 1119.998 kb on + strand, within MPMX19_01083 at 1119.998 kb on + strand, within MPMX19_01083 at 1119.998 kb on + strand, within MPMX19_01083 at 1119.999 kb on - strand, within MPMX19_01083 at 1119.999 kb on - strand, within MPMX19_01083 at 1120.328 kb on + strand, within MPMX19_01083 at 1120.328 kb on + strand, within MPMX19_01083 at 1120.328 kb on + strand, within MPMX19_01083 at 1120.328 kb on + strand, within MPMX19_01083 at 1120.329 kb on - strand, within MPMX19_01083 at 1120.329 kb on - strand, within MPMX19_01083 at 1120.329 kb on - strand, within MPMX19_01083 at 1120.329 kb on - strand, within MPMX19_01083 at 1120.430 kb on - strand at 1120.469 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 1,117,596 + +0.1 1,117,805 + MPMX19_01080 0.47 -1.1 1,117,805 + MPMX19_01080 0.47 -0.4 1,118,337 + MPMX19_01081 0.48 -0.7 1,118,337 + MPMX19_01081 0.48 +0.5 1,118,448 + MPMX19_01081 0.71 +0.3 1,118,623 + +1.5 1,118,623 + -0.7 1,118,624 - -1.5 1,118,624 - +0.9 1,118,624 - -0.7 1,119,632 + -0.7 1,119,632 + -0.0 1,119,632 + -0.0 1,119,633 - -0.7 1,119,633 - -1.0 1,119,633 - -0.3 1,119,633 - -0.7 1,119,633 - -0.9 1,119,633 - -0.6 1,119,633 - +1.3 1,119,633 - -1.1 1,119,635 + -0.3 1,119,635 + -0.0 1,119,635 + +0.5 1,119,635 + -0.7 1,119,636 - -0.5 1,119,636 - -0.5 1,119,998 + MPMX19_01083 0.49 +0.9 1,119,998 + MPMX19_01083 0.49 -0.5 1,119,998 + MPMX19_01083 0.49 -1.1 1,119,998 + MPMX19_01083 0.49 +3.3 1,119,999 - MPMX19_01083 0.50 -0.9 1,119,999 - MPMX19_01083 0.50 -0.3 1,120,328 + MPMX19_01083 0.89 -0.9 1,120,328 + MPMX19_01083 0.89 -0.4 1,120,328 + MPMX19_01083 0.89 -0.0 1,120,328 + MPMX19_01083 0.89 +0.5 1,120,329 - MPMX19_01083 0.89 -0.3 1,120,329 - MPMX19_01083 0.89 -1.1 1,120,329 - MPMX19_01083 0.89 -1.2 1,120,329 - MPMX19_01083 0.89 +0.7 1,120,430 - -0.4 1,120,469 - -0.1
Or see this region's nucleotide sequence