Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_01023 and MPMX19_01024 overlap by 4 nucleotides MPMX19_01024 and MPMX19_01025 are separated by 4 nucleotides MPMX19_01025 and MPMX19_01026 are separated by 31 nucleotides
MPMX19_01023: MPMX19_01023 - Bifunctional adenosylcobalamin biosynthesis protein CobP, at 1,061,237 to 1,061,776
_01023
MPMX19_01024: MPMX19_01024 - Corrinoid adenosyltransferase, at 1,061,773 to 1,062,396
_01024
MPMX19_01025: MPMX19_01025 - Cobyric acid synthase, at 1,062,401 to 1,063,879
_01025
MPMX19_01026: MPMX19_01026 - 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, at 1,063,911 to 1,064,888
_01026
Position (kb)
1062
1063
1064 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1061.772 kb on + strand at 1061.772 kb on + strand at 1061.772 kb on + strand at 1061.772 kb on + strand at 1061.772 kb on + strand at 1061.772 kb on + strand at 1061.772 kb on + strand at 1061.772 kb on + strand at 1061.772 kb on + strand at 1061.772 kb on + strand at 1061.772 kb on + strand at 1061.772 kb on + strand at 1061.772 kb on + strand at 1061.772 kb on + strand at 1062.417 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 1,061,772 + +2.1 1,061,772 + +0.7 1,061,772 + -0.6 1,061,772 + -1.5 1,061,772 + -0.2 1,061,772 + +2.1 1,061,772 + -1.7 1,061,772 + +0.0 1,061,772 + -1.2 1,061,772 + +0.2 1,061,772 + +0.6 1,061,772 + -0.8 1,061,772 + -0.5 1,061,772 + -2.4 1,062,417 + -0.4
Or see this region's nucleotide sequence