Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00993 and MPMX19_00994 overlap by 59 nucleotides MPMX19_00994 and MPMX19_00995 overlap by 10 nucleotides MPMX19_00995 and MPMX19_00996 are separated by 36 nucleotides
MPMX19_00993: MPMX19_00993 - Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific), at 1,033,792 to 1,034,532
_00993
MPMX19_00994: MPMX19_00994 - hypothetical protein, at 1,034,474 to 1,035,367
_00994
MPMX19_00995: MPMX19_00995 - 1-deoxy-D-xylulose 5-phosphate reductoisomerase, at 1,035,358 to 1,036,554
_00995
MPMX19_00996: MPMX19_00996 - Metalloprotease MmpA, at 1,036,591 to 1,037,724
_00996
Position (kb)
1035
1036
1037 Strain fitness (log2 ratio)
-2
-1
0
1 at 1036.678 kb on + strand at 1036.678 kb on + strand at 1036.678 kb on + strand at 1036.678 kb on + strand at 1036.678 kb on + strand at 1036.678 kb on + strand at 1036.678 kb on + strand at 1036.678 kb on + strand at 1036.678 kb on + strand at 1036.679 kb on - strand at 1036.679 kb on - strand at 1036.679 kb on - strand at 1036.679 kb on - strand at 1036.753 kb on - strand, within MPMX19_00996 at 1036.753 kb on - strand, within MPMX19_00996 at 1036.753 kb on - strand, within MPMX19_00996 at 1036.782 kb on + strand, within MPMX19_00996 at 1036.804 kb on + strand, within MPMX19_00996 at 1036.804 kb on + strand, within MPMX19_00996 at 1036.804 kb on + strand, within MPMX19_00996 at 1036.804 kb on + strand, within MPMX19_00996 at 1036.805 kb on - strand, within MPMX19_00996
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 1,036,678 + -0.4 1,036,678 + -1.5 1,036,678 + -0.9 1,036,678 + -1.0 1,036,678 + -1.8 1,036,678 + -0.5 1,036,678 + -2.2 1,036,678 + -1.7 1,036,678 + +0.5 1,036,679 - +0.5 1,036,679 - -0.6 1,036,679 - -2.0 1,036,679 - -2.2 1,036,753 - MPMX19_00996 0.14 +1.1 1,036,753 - MPMX19_00996 0.14 +1.3 1,036,753 - MPMX19_00996 0.14 +0.8 1,036,782 + MPMX19_00996 0.17 -1.9 1,036,804 + MPMX19_00996 0.19 -0.9 1,036,804 + MPMX19_00996 0.19 -0.7 1,036,804 + MPMX19_00996 0.19 -1.0 1,036,804 + MPMX19_00996 0.19 -0.7 1,036,805 - MPMX19_00996 0.19 +0.1
Or see this region's nucleotide sequence