Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00924 and MPMX19_00925 are separated by 174 nucleotides MPMX19_00925 and MPMX19_00926 are separated by 100 nucleotides MPMX19_00926 and MPMX19_00927 are separated by 3 nucleotides
MPMX19_00924: MPMX19_00924 - hypothetical protein, at 963,564 to 964,364
_00924
MPMX19_00925: MPMX19_00925 - hypothetical protein, at 964,539 to 964,907
_00925
MPMX19_00926: MPMX19_00926 - Inner membrane protein YbbJ, at 965,008 to 965,451
_00926
MPMX19_00927: MPMX19_00927 - Protein QmcA, at 965,455 to 966,411
_00927
Position (kb) 965
966 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 964.152 kb on + strand, within MPMX19_00924 at 964.369 kb on - strand at 964.380 kb on + strand at 964.380 kb on + strand at 964.380 kb on + strand at 964.380 kb on + strand at 964.380 kb on + strand at 964.380 kb on + strand at 964.380 kb on + strand at 964.381 kb on - strand at 964.381 kb on - strand at 964.381 kb on - strand at 964.921 kb on + strand at 964.921 kb on + strand at 964.921 kb on + strand at 964.921 kb on + strand at 964.921 kb on + strand at 964.921 kb on + strand at 964.921 kb on + strand at 964.922 kb on - strand at 964.922 kb on - strand at 964.922 kb on - strand at 964.922 kb on - strand at 965.009 kb on + strand at 965.009 kb on + strand at 965.009 kb on + strand at 965.009 kb on + strand at 965.009 kb on + strand at 965.052 kb on + strand at 965.053 kb on - strand, within MPMX19_00926 at 965.053 kb on - strand, within MPMX19_00926 at 965.663 kb on + strand, within MPMX19_00927 at 965.663 kb on + strand, within MPMX19_00927 at 965.663 kb on + strand, within MPMX19_00927 at 965.663 kb on + strand, within MPMX19_00927 at 965.663 kb on + strand, within MPMX19_00927 at 965.663 kb on + strand, within MPMX19_00927 at 965.663 kb on + strand, within MPMX19_00927 at 965.663 kb on + strand, within MPMX19_00927 at 965.663 kb on + strand, within MPMX19_00927 at 965.663 kb on + strand, within MPMX19_00927 at 965.663 kb on + strand, within MPMX19_00927 at 965.663 kb on + strand, within MPMX19_00927 at 965.663 kb on + strand, within MPMX19_00927 at 965.663 kb on + strand, within MPMX19_00927 at 965.664 kb on - strand, within MPMX19_00927 at 965.664 kb on - strand, within MPMX19_00927 at 965.664 kb on - strand, within MPMX19_00927 at 965.664 kb on - strand, within MPMX19_00927 at 965.664 kb on - strand, within MPMX19_00927 at 965.664 kb on - strand, within MPMX19_00927 at 965.664 kb on - strand, within MPMX19_00927 at 965.664 kb on - strand, within MPMX19_00927 at 965.664 kb on - strand, within MPMX19_00927 at 965.664 kb on - strand, within MPMX19_00927 at 965.664 kb on - strand, within MPMX19_00927 at 965.664 kb on - strand, within MPMX19_00927 at 965.664 kb on - strand, within MPMX19_00927 at 965.664 kb on - strand, within MPMX19_00927 at 965.664 kb on - strand, within MPMX19_00927 at 965.664 kb on - strand, within MPMX19_00927 at 965.664 kb on - strand, within MPMX19_00927 at 965.664 kb on - strand, within MPMX19_00927 at 965.681 kb on + strand, within MPMX19_00927 at 965.681 kb on + strand, within MPMX19_00927 at 965.681 kb on + strand, within MPMX19_00927 at 965.681 kb on + strand, within MPMX19_00927 at 965.682 kb on - strand, within MPMX19_00927 at 965.682 kb on - strand, within MPMX19_00927 at 965.682 kb on - strand, within MPMX19_00927 at 965.682 kb on - strand, within MPMX19_00927 at 966.110 kb on + strand, within MPMX19_00927 at 966.110 kb on + strand, within MPMX19_00927 at 966.110 kb on + strand, within MPMX19_00927 at 966.110 kb on + strand, within MPMX19_00927 at 966.110 kb on + strand, within MPMX19_00927 at 966.110 kb on + strand, within MPMX19_00927 at 966.110 kb on + strand, within MPMX19_00927 at 966.110 kb on + strand, within MPMX19_00927 at 966.110 kb on + strand, within MPMX19_00927 at 966.110 kb on + strand, within MPMX19_00927 at 966.110 kb on + strand, within MPMX19_00927 at 966.110 kb on + strand, within MPMX19_00927 at 966.111 kb on - strand, within MPMX19_00927 at 966.111 kb on - strand, within MPMX19_00927 at 966.111 kb on - strand, within MPMX19_00927 at 966.111 kb on - strand, within MPMX19_00927 at 966.111 kb on - strand, within MPMX19_00927 at 966.111 kb on - strand, within MPMX19_00927 at 966.111 kb on - strand, within MPMX19_00927 at 966.111 kb on - strand, within MPMX19_00927 at 966.111 kb on - strand, within MPMX19_00927 at 966.111 kb on - strand, within MPMX19_00927 at 966.143 kb on + strand, within MPMX19_00927 at 966.143 kb on + strand, within MPMX19_00927 at 966.143 kb on + strand, within MPMX19_00927 at 966.143 kb on + strand, within MPMX19_00927 at 966.143 kb on + strand, within MPMX19_00927 at 966.143 kb on + strand, within MPMX19_00927 at 966.143 kb on + strand, within MPMX19_00927 at 966.143 kb on + strand, within MPMX19_00927 at 966.143 kb on + strand, within MPMX19_00927 at 966.143 kb on + strand, within MPMX19_00927 at 966.143 kb on + strand, within MPMX19_00927 at 966.143 kb on + strand, within MPMX19_00927 at 966.143 kb on + strand, within MPMX19_00927 at 966.143 kb on + strand, within MPMX19_00927 at 966.143 kb on + strand, within MPMX19_00927 at 966.143 kb on + strand, within MPMX19_00927 at 966.144 kb on - strand, within MPMX19_00927 at 966.144 kb on - strand, within MPMX19_00927 at 966.144 kb on - strand, within MPMX19_00927 at 966.144 kb on - strand, within MPMX19_00927 at 966.144 kb on - strand, within MPMX19_00927 at 966.144 kb on - strand, within MPMX19_00927 at 966.144 kb on - strand, within MPMX19_00927 at 966.144 kb on - strand, within MPMX19_00927 at 966.144 kb on - strand, within MPMX19_00927 at 966.144 kb on - strand, within MPMX19_00927 at 966.144 kb on - strand, within MPMX19_00927 at 966.297 kb on - strand, within MPMX19_00927
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 964,152 + MPMX19_00924 0.73 +0.8 964,369 - -0.5 964,380 + -0.5 964,380 + +0.0 964,380 + -1.7 964,380 + -0.7 964,380 + -1.2 964,380 + -1.0 964,380 + -1.0 964,381 - -0.2 964,381 - +0.3 964,381 - -0.5 964,921 + -0.1 964,921 + -1.6 964,921 + -1.2 964,921 + -0.1 964,921 + +0.3 964,921 + -0.2 964,921 + -0.7 964,922 - +1.3 964,922 - +0.0 964,922 - +0.8 964,922 - +0.3 965,009 + +0.8 965,009 + -1.2 965,009 + -0.8 965,009 + +0.3 965,009 + -0.9 965,052 + +0.2 965,053 - MPMX19_00926 0.10 -1.0 965,053 - MPMX19_00926 0.10 -1.1 965,663 + MPMX19_00927 0.22 -1.1 965,663 + MPMX19_00927 0.22 -1.9 965,663 + MPMX19_00927 0.22 -0.4 965,663 + MPMX19_00927 0.22 -0.3 965,663 + MPMX19_00927 0.22 -0.2 965,663 + MPMX19_00927 0.22 -0.9 965,663 + MPMX19_00927 0.22 -0.4 965,663 + MPMX19_00927 0.22 +0.0 965,663 + MPMX19_00927 0.22 -0.2 965,663 + MPMX19_00927 0.22 -0.9 965,663 + MPMX19_00927 0.22 +1.8 965,663 + MPMX19_00927 0.22 -1.0 965,663 + MPMX19_00927 0.22 -1.2 965,663 + MPMX19_00927 0.22 -0.2 965,664 - MPMX19_00927 0.22 +0.0 965,664 - MPMX19_00927 0.22 -1.1 965,664 - MPMX19_00927 0.22 -1.5 965,664 - MPMX19_00927 0.22 -2.2 965,664 - MPMX19_00927 0.22 -1.3 965,664 - MPMX19_00927 0.22 -2.9 965,664 - MPMX19_00927 0.22 -1.7 965,664 - MPMX19_00927 0.22 -0.5 965,664 - MPMX19_00927 0.22 +0.8 965,664 - MPMX19_00927 0.22 -1.2 965,664 - MPMX19_00927 0.22 -1.0 965,664 - MPMX19_00927 0.22 -1.2 965,664 - MPMX19_00927 0.22 -1.2 965,664 - MPMX19_00927 0.22 -0.7 965,664 - MPMX19_00927 0.22 -1.6 965,664 - MPMX19_00927 0.22 -0.8 965,664 - MPMX19_00927 0.22 -0.8 965,664 - MPMX19_00927 0.22 +0.6 965,681 + MPMX19_00927 0.24 +1.9 965,681 + MPMX19_00927 0.24 -1.2 965,681 + MPMX19_00927 0.24 -0.1 965,681 + MPMX19_00927 0.24 -1.9 965,682 - MPMX19_00927 0.24 -2.6 965,682 - MPMX19_00927 0.24 -0.6 965,682 - MPMX19_00927 0.24 -0.5 965,682 - MPMX19_00927 0.24 -0.2 966,110 + MPMX19_00927 0.68 -2.4 966,110 + MPMX19_00927 0.68 -2.2 966,110 + MPMX19_00927 0.68 +0.5 966,110 + MPMX19_00927 0.68 -0.7 966,110 + MPMX19_00927 0.68 -0.1 966,110 + MPMX19_00927 0.68 -2.0 966,110 + MPMX19_00927 0.68 +1.5 966,110 + MPMX19_00927 0.68 -0.6 966,110 + MPMX19_00927 0.68 +0.6 966,110 + MPMX19_00927 0.68 -2.3 966,110 + MPMX19_00927 0.68 -1.2 966,110 + MPMX19_00927 0.68 -1.1 966,111 - MPMX19_00927 0.69 -1.7 966,111 - MPMX19_00927 0.69 -2.0 966,111 - MPMX19_00927 0.69 -4.4 966,111 - MPMX19_00927 0.69 -1.7 966,111 - MPMX19_00927 0.69 -1.0 966,111 - MPMX19_00927 0.69 -0.5 966,111 - MPMX19_00927 0.69 +0.0 966,111 - MPMX19_00927 0.69 -2.6 966,111 - MPMX19_00927 0.69 +0.2 966,111 - MPMX19_00927 0.69 -1.7 966,143 + MPMX19_00927 0.72 -1.0 966,143 + MPMX19_00927 0.72 -0.3 966,143 + MPMX19_00927 0.72 -0.3 966,143 + MPMX19_00927 0.72 -1.0 966,143 + MPMX19_00927 0.72 -1.1 966,143 + MPMX19_00927 0.72 +0.5 966,143 + MPMX19_00927 0.72 -1.0 966,143 + MPMX19_00927 0.72 +0.8 966,143 + MPMX19_00927 0.72 +0.6 966,143 + MPMX19_00927 0.72 +0.0 966,143 + MPMX19_00927 0.72 -0.4 966,143 + MPMX19_00927 0.72 -1.4 966,143 + MPMX19_00927 0.72 -1.6 966,143 + MPMX19_00927 0.72 -1.6 966,143 + MPMX19_00927 0.72 +0.0 966,143 + MPMX19_00927 0.72 +0.5 966,144 - MPMX19_00927 0.72 -1.0 966,144 - MPMX19_00927 0.72 -1.6 966,144 - MPMX19_00927 0.72 -1.4 966,144 - MPMX19_00927 0.72 -0.8 966,144 - MPMX19_00927 0.72 -1.5 966,144 - MPMX19_00927 0.72 -0.9 966,144 - MPMX19_00927 0.72 -0.6 966,144 - MPMX19_00927 0.72 +0.2 966,144 - MPMX19_00927 0.72 +0.5 966,144 - MPMX19_00927 0.72 -0.8 966,144 - MPMX19_00927 0.72 +0.0 966,297 - MPMX19_00927 0.88 -1.0
Or see this region's nucleotide sequence