Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_00805

Experiment: MGL

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX19_00804 and MPMX19_00805 overlap by 1 nucleotidesMPMX19_00805 and MPMX19_00806 are separated by 82 nucleotides MPMX19_00804: MPMX19_00804 - Glutamate-pyruvate aminotransferase AlaC, at 826,261 to 827,535 _00804 MPMX19_00805: MPMX19_00805 - Homoserine dehydrogenase, at 827,535 to 828,839 _00805 MPMX19_00806: MPMX19_00806 - Fructose-1,6-bisphosphatase class 2, at 828,922 to 829,923 _00806 Position (kb) 827 828 829Strain fitness (log2 ratio) -2 -1 0 1at 828.881 kb on + strandat 828.881 kb on + strandat 828.881 kb on + strandat 828.881 kb on + strandat 828.881 kb on + strandat 828.881 kb on + strandat 828.881 kb on + strandat 828.881 kb on + strandat 828.881 kb on + strandat 828.893 kb on + strandat 828.893 kb on + strandat 828.893 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction MGL
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828,881 + -0.4
828,881 + -0.4
828,881 + -0.2
828,881 + +0.5
828,881 + +0.6
828,881 + -0.4
828,881 + -2.3
828,881 + +0.2
828,881 + -0.6
828,893 + -1.5
828,893 + +0.6
828,893 + +0.4

Or see this region's nucleotide sequence