Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_00697

Experiment: MGL

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX19_00696 and MPMX19_00697 are separated by 3 nucleotidesMPMX19_00697 and MPMX19_00698 overlap by 4 nucleotides MPMX19_00696: MPMX19_00696 - Crossover junction endodeoxyribonuclease RuvC, at 717,852 to 718,940 _00696 MPMX19_00697: MPMX19_00697 - Holliday junction ATP-dependent DNA helicase RuvA, at 718,944 to 719,570 _00697 MPMX19_00698: MPMX19_00698 - Holliday junction ATP-dependent DNA helicase RuvB, at 719,567 to 720,640 _00698 Position (kb) 718 719 720Strain fitness (log2 ratio) -2 -1 0 1at 718.388 kb on + strand, within MPMX19_00696at 718.388 kb on + strand, within MPMX19_00696at 718.388 kb on + strand, within MPMX19_00696at 718.388 kb on + strand, within MPMX19_00696at 718.388 kb on + strand, within MPMX19_00696at 718.388 kb on + strand, within MPMX19_00696at 718.388 kb on + strand, within MPMX19_00696at 718.388 kb on + strand, within MPMX19_00696at 718.388 kb on + strand, within MPMX19_00696at 718.388 kb on + strand, within MPMX19_00696at 718.388 kb on + strand, within MPMX19_00696at 718.389 kb on - strand, within MPMX19_00696at 718.389 kb on - strand, within MPMX19_00696at 718.389 kb on - strand, within MPMX19_00696at 718.389 kb on - strand, within MPMX19_00696at 718.389 kb on - strand, within MPMX19_00696at 718.389 kb on - strand, within MPMX19_00696at 718.389 kb on - strand, within MPMX19_00696at 718.631 kb on + strand, within MPMX19_00696at 718.631 kb on + strand, within MPMX19_00696at 718.631 kb on + strand, within MPMX19_00696at 718.631 kb on + strand, within MPMX19_00696at 718.631 kb on + strand, within MPMX19_00696at 718.631 kb on + strand, within MPMX19_00696at 718.631 kb on + strand, within MPMX19_00696at 718.631 kb on + strand, within MPMX19_00696at 718.631 kb on + strand, within MPMX19_00696at 718.633 kb on + strand, within MPMX19_00696at 718.633 kb on + strand, within MPMX19_00696at 718.633 kb on + strand, within MPMX19_00696at 719.019 kb on + strand, within MPMX19_00697at 719.460 kb on + strand, within MPMX19_00697at 719.923 kb on + strand, within MPMX19_00698at 720.119 kb on + strand, within MPMX19_00698at 720.396 kb on - strand, within MPMX19_00698at 720.479 kb on + strand, within MPMX19_00698

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Per-strain Table

Position Strand Gene LocusTag Fraction MGL
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718,388 + MPMX19_00696 0.49 +0.1
718,388 + MPMX19_00696 0.49 +0.4
718,388 + MPMX19_00696 0.49 -0.7
718,388 + MPMX19_00696 0.49 +0.5
718,388 + MPMX19_00696 0.49 -0.5
718,388 + MPMX19_00696 0.49 -0.8
718,388 + MPMX19_00696 0.49 -0.9
718,388 + MPMX19_00696 0.49 -2.1
718,388 + MPMX19_00696 0.49 +0.1
718,388 + MPMX19_00696 0.49 -1.6
718,388 + MPMX19_00696 0.49 -0.1
718,389 - MPMX19_00696 0.49 +0.4
718,389 - MPMX19_00696 0.49 -0.2
718,389 - MPMX19_00696 0.49 +0.1
718,389 - MPMX19_00696 0.49 +0.4
718,389 - MPMX19_00696 0.49 -0.6
718,389 - MPMX19_00696 0.49 -0.4
718,389 - MPMX19_00696 0.49 +0.8
718,631 + MPMX19_00696 0.72 -0.2
718,631 + MPMX19_00696 0.72 -0.2
718,631 + MPMX19_00696 0.72 -0.8
718,631 + MPMX19_00696 0.72 -0.9
718,631 + MPMX19_00696 0.72 +0.8
718,631 + MPMX19_00696 0.72 +0.8
718,631 + MPMX19_00696 0.72 -0.2
718,631 + MPMX19_00696 0.72 -0.2
718,631 + MPMX19_00696 0.72 -0.2
718,633 + MPMX19_00696 0.72 -0.2
718,633 + MPMX19_00696 0.72 -0.3
718,633 + MPMX19_00696 0.72 +1.0
719,019 + MPMX19_00697 0.12 -0.2
719,460 + MPMX19_00697 0.82 +0.8
719,923 + MPMX19_00698 0.33 +1.1
720,119 + MPMX19_00698 0.51 -0.4
720,396 - MPMX19_00698 0.77 +1.4
720,479 + MPMX19_00698 0.85 +0.4

Or see this region's nucleotide sequence