Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00688 and MPMX19_00689 are separated by 69 nucleotides MPMX19_00689 and MPMX19_00690 are separated by 73 nucleotides
MPMX19_00688: MPMX19_00688 - Methyl-accepting chemotaxis protein, at 709,323 to 711,011
_00688
MPMX19_00689: MPMX19_00689 - Glyceraldehyde-3-phosphate dehydrogenase 1, at 711,081 to 712,103
_00689
MPMX19_00690: MPMX19_00690 - Transketolase 1, at 712,177 to 714,171
_00690
Position (kb)
711
712
713 Strain fitness (log2 ratio)
-2
-1
0
1 at 711.082 kb on + strand at 711.082 kb on + strand at 711.082 kb on + strand at 711.082 kb on + strand at 711.082 kb on + strand at 711.082 kb on + strand at 711.082 kb on + strand at 711.082 kb on + strand at 711.082 kb on + strand at 711.082 kb on + strand at 711.082 kb on + strand at 711.082 kb on + strand at 711.082 kb on + strand at 711.082 kb on + strand at 711.083 kb on - strand at 711.083 kb on - strand at 711.083 kb on - strand at 711.083 kb on - strand at 711.083 kb on - strand at 711.083 kb on - strand at 711.083 kb on - strand at 711.083 kb on - strand at 711.083 kb on - strand at 711.148 kb on + strand at 711.148 kb on + strand at 711.149 kb on - strand at 711.149 kb on - strand at 711.259 kb on + strand, within MPMX19_00689 at 711.259 kb on + strand, within MPMX19_00689 at 711.259 kb on + strand, within MPMX19_00689 at 711.259 kb on + strand, within MPMX19_00689 at 711.260 kb on - strand, within MPMX19_00689 at 711.260 kb on - strand, within MPMX19_00689 at 711.260 kb on - strand, within MPMX19_00689 at 711.260 kb on - strand, within MPMX19_00689 at 712.039 kb on + strand at 712.039 kb on + strand at 712.096 kb on - strand at 712.179 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 711,082 + -1.1 711,082 + -1.1 711,082 + -0.9 711,082 + +0.1 711,082 + +1.4 711,082 + +0.2 711,082 + +0.2 711,082 + -0.9 711,082 + -0.4 711,082 + -0.5 711,082 + -0.8 711,082 + +0.2 711,082 + +0.9 711,082 + -0.5 711,083 - -0.5 711,083 - -1.2 711,083 - -0.9 711,083 - -0.9 711,083 - -0.8 711,083 - +0.8 711,083 - -0.0 711,083 - -2.3 711,083 - -0.6 711,148 + -0.4 711,148 + -1.3 711,149 - +0.2 711,149 - +0.8 711,259 + MPMX19_00689 0.17 +0.4 711,259 + MPMX19_00689 0.17 -0.9 711,259 + MPMX19_00689 0.17 -0.6 711,259 + MPMX19_00689 0.17 -1.2 711,260 - MPMX19_00689 0.17 -1.1 711,260 - MPMX19_00689 0.17 -1.3 711,260 - MPMX19_00689 0.17 -0.6 711,260 - MPMX19_00689 0.17 +0.1 712,039 + -1.7 712,039 + -0.2 712,096 - +0.2 712,179 - -1.6
Or see this region's nucleotide sequence