Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00523 and MPMX19_00524 are separated by 106 nucleotides MPMX19_00524 and MPMX19_00525 are separated by 196 nucleotides MPMX19_00525 and MPMX19_00526 are separated by 376 nucleotides
MPMX19_00523: MPMX19_00523 - hypothetical protein, at 531,429 to 532,019
_00523
MPMX19_00524: MPMX19_00524 - Lipoprotein signal peptidase, at 532,126 to 532,641
_00524
MPMX19_00525: MPMX19_00525 - Isoleucine--tRNA ligase, at 532,838 to 535,681
_00525
MPMX19_00526: MPMX19_00526 - hypothetical protein, at 536,058 to 537,035
_00526
Position (kb) 532
533
534
535
536 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 532.051 kb on - strand at 532.051 kb on - strand at 532.051 kb on - strand at 532.101 kb on + strand at 532.102 kb on - strand at 532.102 kb on - strand at 532.102 kb on - strand at 532.102 kb on - strand at 532.102 kb on - strand at 532.102 kb on - strand at 532.104 kb on - strand at 532.104 kb on - strand at 532.104 kb on - strand at 532.104 kb on - strand at 532.104 kb on - strand at 532.104 kb on - strand at 532.104 kb on - strand at 532.128 kb on - strand at 532.128 kb on - strand at 532.128 kb on - strand at 532.128 kb on - strand at 532.128 kb on - strand at 532.128 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.638 kb on - strand at 532.725 kb on - strand at 532.813 kb on - strand at 535.706 kb on - strand at 535.706 kb on - strand at 535.706 kb on - strand at 535.781 kb on - strand at 535.781 kb on - strand at 535.854 kb on - strand at 535.854 kb on - strand at 535.854 kb on - strand at 535.984 kb on + strand at 535.984 kb on + strand at 535.985 kb on - strand at 535.985 kb on - strand at 535.985 kb on - strand at 535.985 kb on - strand at 535.985 kb on - strand at 535.985 kb on - strand at 535.985 kb on - strand at 535.985 kb on - strand at 535.985 kb on - strand at 535.986 kb on - strand at 536.454 kb on + strand, within MPMX19_00526 at 536.454 kb on + strand, within MPMX19_00526 at 536.454 kb on + strand, within MPMX19_00526 at 536.454 kb on + strand, within MPMX19_00526 at 536.454 kb on + strand, within MPMX19_00526 at 536.454 kb on + strand, within MPMX19_00526 at 536.454 kb on + strand, within MPMX19_00526 at 536.455 kb on - strand, within MPMX19_00526 at 536.455 kb on - strand, within MPMX19_00526 at 536.455 kb on - strand, within MPMX19_00526 at 536.455 kb on - strand, within MPMX19_00526 at 536.455 kb on - strand, within MPMX19_00526 at 536.455 kb on - strand, within MPMX19_00526 at 536.455 kb on - strand, within MPMX19_00526 at 536.455 kb on - strand, within MPMX19_00526 at 536.455 kb on - strand, within MPMX19_00526 at 536.469 kb on + strand, within MPMX19_00526 at 536.469 kb on + strand, within MPMX19_00526 at 536.469 kb on + strand, within MPMX19_00526 at 536.469 kb on + strand, within MPMX19_00526 at 536.469 kb on + strand, within MPMX19_00526 at 536.469 kb on + strand, within MPMX19_00526 at 536.469 kb on + strand, within MPMX19_00526 at 536.469 kb on + strand, within MPMX19_00526 at 536.469 kb on + strand, within MPMX19_00526 at 536.469 kb on + strand, within MPMX19_00526 at 536.469 kb on + strand, within MPMX19_00526 at 536.469 kb on + strand, within MPMX19_00526 at 536.469 kb on + strand, within MPMX19_00526 at 536.469 kb on + strand, within MPMX19_00526 at 536.469 kb on + strand, within MPMX19_00526 at 536.470 kb on - strand, within MPMX19_00526 at 536.470 kb on - strand, within MPMX19_00526 at 536.470 kb on - strand, within MPMX19_00526 at 536.470 kb on - strand, within MPMX19_00526 at 536.470 kb on - strand, within MPMX19_00526 at 536.470 kb on - strand, within MPMX19_00526 at 536.470 kb on - strand, within MPMX19_00526 at 536.470 kb on - strand, within MPMX19_00526 at 536.470 kb on - strand, within MPMX19_00526 at 536.470 kb on - strand, within MPMX19_00526 at 536.470 kb on - strand, within MPMX19_00526 at 536.470 kb on - strand, within MPMX19_00526 at 536.470 kb on - strand, within MPMX19_00526 at 536.499 kb on + strand, within MPMX19_00526 at 536.499 kb on + strand, within MPMX19_00526 at 536.500 kb on - strand, within MPMX19_00526 at 536.500 kb on - strand, within MPMX19_00526 at 536.500 kb on - strand, within MPMX19_00526 at 536.500 kb on - strand, within MPMX19_00526 at 536.500 kb on - strand, within MPMX19_00526 at 536.500 kb on - strand, within MPMX19_00526 at 536.577 kb on + strand, within MPMX19_00526 at 536.577 kb on + strand, within MPMX19_00526 at 536.577 kb on + strand, within MPMX19_00526 at 536.578 kb on - strand, within MPMX19_00526 at 536.578 kb on - strand, within MPMX19_00526 at 536.578 kb on - strand, within MPMX19_00526 at 536.578 kb on - strand, within MPMX19_00526 at 536.578 kb on - strand, within MPMX19_00526 at 536.578 kb on - strand, within MPMX19_00526 at 536.578 kb on - strand, within MPMX19_00526 at 536.578 kb on - strand, within MPMX19_00526
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 532,051 - -0.5 532,051 - -1.0 532,051 - +2.4 532,101 + +0.9 532,102 - -1.7 532,102 - -1.0 532,102 - -1.6 532,102 - +0.4 532,102 - -1.2 532,102 - -1.0 532,104 - +0.6 532,104 - +0.6 532,104 - -0.5 532,104 - -0.4 532,104 - -0.3 532,104 - +0.5 532,104 - -2.6 532,128 - -0.7 532,128 - -1.1 532,128 - -1.4 532,128 - -0.5 532,128 - +0.1 532,128 - -1.6 532,638 - -0.5 532,638 - -1.0 532,638 - -0.2 532,638 - -1.4 532,638 - +0.0 532,638 - -1.4 532,638 - +0.0 532,638 - -0.6 532,638 - +0.2 532,638 - +0.0 532,638 - +0.0 532,638 - -1.3 532,638 - -1.7 532,638 - -1.8 532,638 - -1.0 532,638 - +1.4 532,638 - -1.0 532,638 - +0.5 532,638 - +1.7 532,638 - -0.2 532,638 - -0.5 532,638 - +0.0 532,638 - +0.2 532,638 - +0.8 532,638 - -1.6 532,638 - -0.1 532,638 - -0.8 532,638 - -2.2 532,638 - -0.3 532,638 - -0.8 532,638 - -0.6 532,638 - -0.8 532,638 - +0.4 532,638 - -0.2 532,638 - +0.9 532,638 - -0.7 532,725 - -1.8 532,813 - -1.2 535,706 - -0.0 535,706 - -0.1 535,706 - +2.9 535,781 - -1.7 535,781 - -0.7 535,854 - -0.1 535,854 - -0.4 535,854 - +0.4 535,984 + -0.4 535,984 + -0.4 535,985 - -0.5 535,985 - -0.4 535,985 - -1.9 535,985 - +1.4 535,985 - -2.0 535,985 - +0.2 535,985 - -0.6 535,985 - -1.4 535,985 - -0.4 535,986 - +0.5 536,454 + MPMX19_00526 0.40 -1.0 536,454 + MPMX19_00526 0.40 -0.5 536,454 + MPMX19_00526 0.40 +0.8 536,454 + MPMX19_00526 0.40 -0.4 536,454 + MPMX19_00526 0.40 -0.2 536,454 + MPMX19_00526 0.40 -1.0 536,454 + MPMX19_00526 0.40 -0.2 536,455 - MPMX19_00526 0.41 -0.4 536,455 - MPMX19_00526 0.41 +1.7 536,455 - MPMX19_00526 0.41 -2.0 536,455 - MPMX19_00526 0.41 -1.7 536,455 - MPMX19_00526 0.41 -0.2 536,455 - MPMX19_00526 0.41 -0.3 536,455 - MPMX19_00526 0.41 -0.3 536,455 - MPMX19_00526 0.41 -0.1 536,455 - MPMX19_00526 0.41 -0.8 536,469 + MPMX19_00526 0.42 -0.4 536,469 + MPMX19_00526 0.42 -0.4 536,469 + MPMX19_00526 0.42 +0.0 536,469 + MPMX19_00526 0.42 +0.1 536,469 + MPMX19_00526 0.42 -0.8 536,469 + MPMX19_00526 0.42 -0.4 536,469 + MPMX19_00526 0.42 -0.4 536,469 + MPMX19_00526 0.42 -0.9 536,469 + MPMX19_00526 0.42 -1.2 536,469 + MPMX19_00526 0.42 +0.0 536,469 + MPMX19_00526 0.42 -0.5 536,469 + MPMX19_00526 0.42 +0.0 536,469 + MPMX19_00526 0.42 +0.7 536,469 + MPMX19_00526 0.42 -0.2 536,469 + MPMX19_00526 0.42 +0.0 536,470 - MPMX19_00526 0.42 +0.5 536,470 - MPMX19_00526 0.42 -0.3 536,470 - MPMX19_00526 0.42 -0.8 536,470 - MPMX19_00526 0.42 -0.8 536,470 - MPMX19_00526 0.42 -0.4 536,470 - MPMX19_00526 0.42 -0.2 536,470 - MPMX19_00526 0.42 +0.2 536,470 - MPMX19_00526 0.42 -0.8 536,470 - MPMX19_00526 0.42 -0.1 536,470 - MPMX19_00526 0.42 +1.0 536,470 - MPMX19_00526 0.42 +0.8 536,470 - MPMX19_00526 0.42 -2.0 536,470 - MPMX19_00526 0.42 +0.4 536,499 + MPMX19_00526 0.45 -0.7 536,499 + MPMX19_00526 0.45 -0.4 536,500 - MPMX19_00526 0.45 -2.8 536,500 - MPMX19_00526 0.45 +1.4 536,500 - MPMX19_00526 0.45 -0.4 536,500 - MPMX19_00526 0.45 -1.4 536,500 - MPMX19_00526 0.45 +0.2 536,500 - MPMX19_00526 0.45 -0.3 536,577 + MPMX19_00526 0.53 -0.6 536,577 + MPMX19_00526 0.53 -0.9 536,577 + MPMX19_00526 0.53 -1.4 536,578 - MPMX19_00526 0.53 +0.8 536,578 - MPMX19_00526 0.53 +1.4 536,578 - MPMX19_00526 0.53 +0.2 536,578 - MPMX19_00526 0.53 +0.0 536,578 - MPMX19_00526 0.53 -0.2 536,578 - MPMX19_00526 0.53 -1.8 536,578 - MPMX19_00526 0.53 -0.2 536,578 - MPMX19_00526 0.53 +1.6
Or see this region's nucleotide sequence