Strain Fitness in Azospirillum sp. SherDot2

Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_00193

Experiment: MGL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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Per-strain Table

Position	Strand	LocusTag	Fraction	MGL
				remove
199,311	+			-0.5
199,311	+			-0.1
199,311	+			+0.5
199,312	-			-0.8
199,312	-			-1.6
199,312	-			-1.0
199,335	+			+0.2
199,335	+			-0.6
199,335	+			+0.8
199,335	+			+0.9
199,335	+			-0.3
199,335	+			-1.3
199,335	+			-0.1
199,335	+			+0.5
199,335	+			-1.6
199,335	+			-0.9
199,335	+			-1.0
199,336	-			+1.2
199,336	-			-0.5
199,336	-			-0.8
199,336	-			+0.5
199,336	-			-0.3
199,336	-			-0.8
199,336	-			+0.9
199,336	-			-0.7
199,336	-			+0.9
199,336	-			-0.2
199,336	-			+0.5
199,336	-			-0.1
199,336	-			+0.2
199,336	-			+0.3
199,336	-			+0.0
199,336	-			-2.2
199,336	-			+0.2
199,336	-			-0.5
199,373	+			-0.3
199,373	+			-0.8
199,373	+			-2.2
199,373	+			-0.4
199,373	+			-0.6
199,373	+			-1.8
199,373	+			-0.7
199,373	+			-1.7
199,373	+			+0.5
199,374	-			-1.0
199,374	-			+0.5
199,374	-			+1.3
199,374	-			-0.3
199,374	-			+0.2
199,374	-			-1.1
199,374	-			+0.3
199,374	-			-0.5
199,374	-			+0.3
199,374	-			-0.2
199,374	-			+0.2
199,378	+			-0.7
199,378	+			-0.3
199,378	+			+0.3
199,378	+			-1.5
199,379	-			+1.3
199,379	-			+0.5
199,379	-			+0.3
199,379	-			-0.4
199,379	-			+0.4
199,379	-			-0.2
199,379	-			-0.7
199,379	-			+0.9
199,379	-			+0.5
199,379	-			+0.2
199,560	+	MPMX19_00190	0.56	+0.9
199,561	-	MPMX19_00190	0.57	+0.2
199,561	-	MPMX19_00190	0.57	-0.7
199,561	-	MPMX19_00190	0.57	+0.9
199,587	+	MPMX19_00190	0.67	+0.5
199,587	+	MPMX19_00190	0.67	-1.1
199,587	+	MPMX19_00190	0.67	+1.5
199,587	+	MPMX19_00190	0.67	-0.1
199,587	+	MPMX19_00190	0.67	-0.5
199,587	+	MPMX19_00190	0.67	-1.1
199,587	+	MPMX19_00190	0.67	-0.2
199,588	-	MPMX19_00190	0.67	-0.4
199,588	-	MPMX19_00190	0.67	-0.3
199,588	-	MPMX19_00190	0.67	+1.7
199,588	-	MPMX19_00190	0.67	-1.0
199,588	-	MPMX19_00190	0.67	+0.5
199,679	+			-1.7
199,679	+			-0.5
199,679	+			+0.9
199,679	+			-1.3
199,680	-			-1.0
199,680	-			-0.9
199,680	-			+0.2
199,680	-			+0.5
199,680	-			+0.2
199,742	+	MPMX19_00191	0.16	-1.1
199,742	+	MPMX19_00191	0.16	-0.7
199,742	+	MPMX19_00191	0.16	-1.3
199,742	+	MPMX19_00191	0.16	+0.7
199,742	+	MPMX19_00191	0.16	-0.5
199,742	+	MPMX19_00191	0.16	+0.5
199,742	+	MPMX19_00191	0.16	-0.4
199,743	-	MPMX19_00191	0.17	+2.5
199,743	-	MPMX19_00191	0.17	+0.2
199,843	+	MPMX19_00191	0.74	-1.3
199,843	+	MPMX19_00191	0.74	-1.0
199,843	+	MPMX19_00191	0.74	-0.3
199,844	-	MPMX19_00191	0.75	+0.3
199,844	-	MPMX19_00191	0.75	+0.9
200,002	+			-1.4
200,002	+			-0.5
200,002	+			+0.5
200,002	+			+1.1
200,002	+			-1.1
200,032	+			-0.3
200,037	+			-0.3
200,040	+			-1.4
200,040	+			+0.3
200,040	+			-1.8
200,227	+			-0.9
200,227	+			-0.0
200,227	+			+0.2
200,228	-			-1.3
200,228	-			-0.7
200,399	+	MPMX19_00193	0.49	-0.1
200,400	-	MPMX19_00193	0.49	-0.7
200,400	-	MPMX19_00193	0.49	-1.4
200,479	+			+0.6
200,479	+			-0.6
200,479	+			+1.2
200,479	+			-1.4
200,479	+			-0.5
200,479	+			-0.3
200,479	+			-0.7
200,479	+			+0.7
200,479	+			-0.6
200,479	+			+0.9
200,479	+			-1.5
200,479	+			-0.1
200,479	+			+1.9
200,479	+			-1.3
200,479	+			-0.6
200,479	+			-0.3
200,479	+			-1.9
200,479	+			+0.5
200,479	+			-0.1
200,479	+			-1.1
200,479	+			-0.1
200,479	+			-1.8
200,480	-			+0.6
200,480	-			+1.5
200,480	-			-1.9
200,480	-			+0.1
200,480	-			+0.3
200,480	-			+0.1
200,480	-			+0.5
200,480	-			-0.5
200,480	-			-0.5
200,480	-			+0.5
200,480	-			-0.1
200,480	-			-0.6
200,480	-			-0.1
200,480	-			-0.5
200,480	-			-1.2
200,480	-			-2.0
200,480	-			-1.4
200,480	-			+0.7
200,480	-			-1.1
200,480	-			-0.3
200,480	-			-0.8
200,480	-			+0.2
200,480	-			+1.3
200,480	-			-0.2
200,480	-			-0.7
200,480	-			-1.2
200,480	-			-0.1
200,480	-			+1.2
200,593	+	MPMX19_00194	0.50	+0.7
200,593	+	MPMX19_00194	0.50	+0.2
200,593	+	MPMX19_00194	0.50	-0.6
200,593	+	MPMX19_00194	0.50	-0.2
200,593	+	MPMX19_00194	0.50	-0.9
200,593	+	MPMX19_00194	0.50	-0.3
200,593	+	MPMX19_00194	0.50	-1.3
200,593	+	MPMX19_00194	0.50	-1.4
200,593	+	MPMX19_00194	0.50	+0.4
200,593	+	MPMX19_00194	0.50	-2.0
200,594	-	MPMX19_00194	0.51	-0.3
200,594	-	MPMX19_00194	0.51	+1.1
200,594	-	MPMX19_00194	0.51	-2.1
200,594	-	MPMX19_00194	0.51	-0.6
200,594	-	MPMX19_00194	0.51	+1.6
200,594	-	MPMX19_00194	0.51	+0.3
200,594	-	MPMX19_00194	0.51	-1.1
200,594	-	MPMX19_00194	0.51	-1.1
200,709	+			-1.1
200,709	+			-1.2
200,709	+			-0.3
200,709	+			-1.2
200,709	+			-0.7
200,709	+			-1.1
200,709	+			-0.3
200,709	+			+0.9
200,709	+			-1.4
200,709	+			-0.1
200,709	+			-0.5
200,709	+			-0.8
200,709	+			+0.2
200,709	+			-0.7
200,709	+			-0.1
200,709	+			-0.7
200,709	+			-1.0
200,709	+			-0.5
200,709	+			-0.1
200,709	+			-1.2
200,709	+			-1.0
200,709	+			-1.6
200,710	-			+0.2
200,710	-			-0.7
200,710	-			-1.2
200,710	-			-1.1
200,710	-			-0.5
200,710	-			-1.8
200,710	-			-0.3
200,710	-			-0.8
200,710	-			-1.5
200,710	-			-0.1
200,710	-			-0.3
200,710	-			-1.0
200,710	-			-1.2
200,710	-			-0.1
200,710	-			+0.2
200,710	-			-0.5
200,710	-			-0.2
200,710	-			-1.2
200,710	-			-2.4
200,710	-			-1.7
200,710	-			-0.4
200,710	-			-1.8
200,710	-			-0.1
200,710	-			+0.9
200,735	+			-2.0
200,735	+			+0.0
200,735	+			-1.5
200,735	+			+0.5
200,735	+			-0.9
200,735	+			-1.6
200,735	+			-1.4
200,735	+			+0.0
200,735	+			+0.2
200,735	+			-1.2
200,735	+			-0.3
200,735	+			+0.1
200,735	+			-1.4
200,735	+			-1.8
200,735	+			-0.2
200,735	+			+0.6
200,735	+			-1.4
200,735	+			-1.1
200,735	+			-0.4
200,735	+			-0.3
200,735	+			-0.8
200,735	+			-0.1
200,735	+			-1.0
200,735	+			-0.9
200,735	+			-0.4
200,735	+			-0.4
200,735	+			-0.1
200,735	+			-1.9
200,735	+			+0.2
200,735	+			+0.2
200,735	+			-1.6
200,735	+			+0.2
200,735	+			-2.0
200,735	+			-0.8
200,735	+			-1.5
200,735	+			-1.0
200,735	+			-0.3
200,735	+			+0.2
200,735	+			-0.1
200,735	+			-0.7
200,735	+			+0.7
200,735	+			-0.5
200,735	+			-0.3
200,735	+			-1.1
200,735	+			-0.2
200,735	+			-0.5
200,735	+			-1.6
200,735	+			-0.1
200,735	+			-0.3
200,735	+			-0.2
200,735	+			-1.2
200,735	+			-1.0
200,735	+			-1.3
200,735	+			-0.7
200,735	+			-0.1
200,735	+			+0.5
200,735	+			-0.8
200,735	+			+0.3
200,735	+			-1.4
200,735	+			-1.0
200,735	+			+0.3
200,735	+			-0.7
200,735	+			-0.7
200,735	+			-0.3
200,735	+			-2.3
200,735	+			-0.4
200,735	+			-1.1
200,735	+			-1.2
200,735	+			-0.6
200,735	+			-0.1
200,735	+			+0.3
200,735	+			-1.0
200,735	+			-1.5
200,735	+			-0.5
200,735	+			+0.5
200,735	+			-0.9
200,735	+			+0.2
200,735	+			-0.3
200,735	+			-0.3
200,735	+			+0.1
200,735	+			+0.0
200,736	-			-0.1
200,736	-			-0.1
200,736	-			-0.9
200,736	-			-1.1
200,736	-			-0.2
200,736	-			+0.4
200,736	-			+0.9
200,736	-			+0.2
200,736	-			-0.2
200,736	-			-0.8
200,736	-			+0.1
200,736	-			-0.4
200,736	-			+1.5
200,736	-			+0.7
200,736	-			-0.5
200,736	-			+0.3
200,736	-			-0.8
200,736	-			-0.1
200,736	-			-0.9
200,736	-			+0.0
200,736	-			+0.0
200,736	-			-1.6
200,736	-			-0.7
200,736	-			-0.7
200,736	-			-0.6
200,736	-			+1.7
200,736	-			-0.1
200,736	-			-0.8
200,736	-			-1.4
200,736	-			+0.0
200,736	-			+1.1
200,736	-			-0.8
200,736	-			-1.4
200,736	-			-0.8
200,736	-			-1.4
200,736	-			-0.1
200,736	-			-1.3
200,736	-			+1.2
200,736	-			-1.0
200,736	-			-0.9
200,736	-			+0.2
200,736	-			+2.1
200,736	-			+0.0
200,736	-			+1.1
200,736	-			-1.1
200,736	-			-0.2
200,736	-			+0.2
200,736	-			-1.1
200,736	-			-0.4
200,736	-			-0.5
200,736	-			-1.1
200,736	-			-0.8
200,736	-			-1.0
200,736	-			-1.7
200,736	-			-2.1
200,736	-			-0.8
201,247	+			-0.5
201,340	+			+0.9

Or see this region's nucleotide sequence