Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_00119

Experiment: MGL

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX19_00118 and MPMX19_00119 are separated by 129 nucleotidesMPMX19_00119 and MPMX19_00120 are separated by 38 nucleotidesMPMX19_00120 and MPMX19_00121 overlap by 4 nucleotides MPMX19_00118: MPMX19_00118 - putative parvulin-type peptidyl-prolyl cis-trans isomerase, at 130,641 to 131,699 _00118 MPMX19_00119: MPMX19_00119 - Arginine biosynthesis bifunctional protein ArgJ, at 131,829 to 133,067 _00119 MPMX19_00120: MPMX19_00120 - hypothetical protein, at 133,106 to 133,690 _00120 MPMX19_00121: MPMX19_00121 - CTP pyrophosphohydrolase, at 133,687 to 134,130 _00121 Position (kb) 131 132 133 134Strain fitness (log2 ratio) -2 -1 0 1at 130.992 kb on + strand, within MPMX19_00118at 130.992 kb on + strand, within MPMX19_00118at 130.992 kb on + strand, within MPMX19_00118at 130.992 kb on + strand, within MPMX19_00118at 130.992 kb on + strand, within MPMX19_00118at 130.992 kb on + strand, within MPMX19_00118at 130.992 kb on + strand, within MPMX19_00118at 130.992 kb on + strand, within MPMX19_00118at 131.046 kb on + strand, within MPMX19_00118at 131.046 kb on + strand, within MPMX19_00118at 131.046 kb on + strand, within MPMX19_00118at 131.046 kb on + strand, within MPMX19_00118at 131.124 kb on + strand, within MPMX19_00118at 131.124 kb on + strand, within MPMX19_00118at 131.124 kb on + strand, within MPMX19_00118at 131.124 kb on + strand, within MPMX19_00118at 131.124 kb on + strand, within MPMX19_00118at 131.124 kb on + strand, within MPMX19_00118at 131.124 kb on + strand, within MPMX19_00118at 131.178 kb on + strand, within MPMX19_00118at 131.178 kb on + strand, within MPMX19_00118at 131.178 kb on + strand, within MPMX19_00118at 131.361 kb on + strand, within MPMX19_00118at 131.697 kb on + strandat 131.697 kb on + strandat 131.697 kb on + strandat 131.697 kb on + strandat 131.697 kb on + strandat 131.697 kb on + strandat 131.697 kb on + strandat 131.697 kb on + strandat 131.697 kb on + strandat 131.697 kb on + strandat 131.697 kb on + strandat 131.697 kb on + strandat 131.697 kb on + strandat 131.697 kb on + strandat 131.697 kb on + strandat 131.697 kb on + strandat 131.697 kb on + strandat 131.697 kb on + strandat 131.697 kb on + strandat 131.697 kb on + strandat 131.697 kb on + strandat 131.697 kb on + strandat 131.697 kb on + strandat 131.697 kb on + strandat 131.698 kb on - strandat 131.698 kb on - strandat 131.698 kb on - strandat 131.698 kb on - strandat 131.698 kb on - strandat 133.065 kb on + strandat 133.065 kb on + strandat 133.065 kb on + strandat 133.066 kb on - strandat 133.066 kb on - strandat 133.066 kb on - strandat 133.066 kb on - strandat 133.066 kb on - strandat 133.256 kb on + strand, within MPMX19_00120at 133.256 kb on + strand, within MPMX19_00120at 133.256 kb on + strand, within MPMX19_00120at 133.256 kb on + strand, within MPMX19_00120at 133.257 kb on - strand, within MPMX19_00120at 133.257 kb on - strand, within MPMX19_00120at 133.257 kb on - strand, within MPMX19_00120at 133.257 kb on - strand, within MPMX19_00120at 133.257 kb on - strand, within MPMX19_00120at 133.436 kb on + strand, within MPMX19_00120at 133.436 kb on + strand, within MPMX19_00120at 133.436 kb on + strand, within MPMX19_00120at 133.436 kb on + strand, within MPMX19_00120at 133.436 kb on + strand, within MPMX19_00120at 133.437 kb on - strand, within MPMX19_00120at 133.437 kb on - strand, within MPMX19_00120at 133.437 kb on - strand, within MPMX19_00120at 133.452 kb on - strand, within MPMX19_00120at 133.960 kb on + strand, within MPMX19_00121at 133.960 kb on + strand, within MPMX19_00121at 133.960 kb on + strand, within MPMX19_00121at 133.960 kb on + strand, within MPMX19_00121at 133.960 kb on + strand, within MPMX19_00121at 133.961 kb on - strand, within MPMX19_00121at 133.961 kb on - strand, within MPMX19_00121at 133.961 kb on - strand, within MPMX19_00121at 133.961 kb on - strand, within MPMX19_00121at 133.961 kb on - strand, within MPMX19_00121at 133.961 kb on - strand, within MPMX19_00121at 133.961 kb on - strand, within MPMX19_00121at 133.990 kb on + strand, within MPMX19_00121at 133.990 kb on + strand, within MPMX19_00121at 133.990 kb on + strand, within MPMX19_00121at 133.990 kb on + strand, within MPMX19_00121at 133.990 kb on + strand, within MPMX19_00121at 133.990 kb on + strand, within MPMX19_00121at 133.990 kb on + strand, within MPMX19_00121at 133.990 kb on + strand, within MPMX19_00121at 133.990 kb on + strand, within MPMX19_00121at 133.990 kb on + strand, within MPMX19_00121at 133.990 kb on + strand, within MPMX19_00121at 133.990 kb on + strand, within MPMX19_00121at 133.990 kb on + strand, within MPMX19_00121at 133.990 kb on + strand, within MPMX19_00121at 133.990 kb on + strand, within MPMX19_00121at 133.990 kb on + strand, within MPMX19_00121at 133.990 kb on + strand, within MPMX19_00121at 133.990 kb on + strand, within MPMX19_00121at 133.990 kb on + strand, within MPMX19_00121at 133.990 kb on + strand, within MPMX19_00121at 133.990 kb on + strand, within MPMX19_00121at 133.990 kb on + strand, within MPMX19_00121at 133.990 kb on + strand, within MPMX19_00121at 133.990 kb on + strand, within MPMX19_00121at 133.991 kb on - strand, within MPMX19_00121at 133.991 kb on - strand, within MPMX19_00121at 133.991 kb on - strand, within MPMX19_00121at 133.991 kb on - strand, within MPMX19_00121at 133.991 kb on - strand, within MPMX19_00121at 133.991 kb on - strand, within MPMX19_00121at 133.991 kb on - strand, within MPMX19_00121at 133.991 kb on - strand, within MPMX19_00121at 133.991 kb on - strand, within MPMX19_00121at 133.991 kb on - strand, within MPMX19_00121at 133.991 kb on - strand, within MPMX19_00121at 133.991 kb on - strand, within MPMX19_00121at 133.991 kb on - strand, within MPMX19_00121at 133.991 kb on - strand, within MPMX19_00121at 133.991 kb on - strand, within MPMX19_00121at 133.991 kb on - strand, within MPMX19_00121at 133.991 kb on - strand, within MPMX19_00121at 133.991 kb on - strand, within MPMX19_00121at 133.991 kb on - strand, within MPMX19_00121at 133.991 kb on - strand, within MPMX19_00121at 133.991 kb on - strand, within MPMX19_00121at 134.053 kb on + strand, within MPMX19_00121at 134.053 kb on + strand, within MPMX19_00121at 134.054 kb on - strand, within MPMX19_00121

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Per-strain Table

Position Strand Gene LocusTag Fraction MGL
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130,992 + MPMX19_00118 0.33 -0.3
130,992 + MPMX19_00118 0.33 -0.3
130,992 + MPMX19_00118 0.33 +0.0
130,992 + MPMX19_00118 0.33 -1.6
130,992 + MPMX19_00118 0.33 -0.2
130,992 + MPMX19_00118 0.33 -1.6
130,992 + MPMX19_00118 0.33 -0.8
130,992 + MPMX19_00118 0.33 -0.5
131,046 + MPMX19_00118 0.38 +0.7
131,046 + MPMX19_00118 0.38 +0.8
131,046 + MPMX19_00118 0.38 +0.9
131,046 + MPMX19_00118 0.38 -1.1
131,124 + MPMX19_00118 0.46 -0.8
131,124 + MPMX19_00118 0.46 -1.1
131,124 + MPMX19_00118 0.46 +0.0
131,124 + MPMX19_00118 0.46 +0.2
131,124 + MPMX19_00118 0.46 +0.9
131,124 + MPMX19_00118 0.46 -0.3
131,124 + MPMX19_00118 0.46 -0.1
131,178 + MPMX19_00118 0.51 -0.6
131,178 + MPMX19_00118 0.51 -1.0
131,178 + MPMX19_00118 0.51 -1.0
131,361 + MPMX19_00118 0.68 -0.6
131,697 + -1.6
131,697 + -0.4
131,697 + -1.1
131,697 + -1.7
131,697 + -1.0
131,697 + -2.6
131,697 + +0.3
131,697 + -0.6
131,697 + -1.0
131,697 + -0.7
131,697 + +1.5
131,697 + -1.8
131,697 + -1.4
131,697 + -1.0
131,697 + -0.7
131,697 + -0.8
131,697 + +0.2
131,697 + +0.4
131,697 + +0.4
131,697 + -0.0
131,697 + -0.9
131,697 + -1.4
131,697 + +0.7
131,697 + -0.1
131,698 - +0.5
131,698 - +1.5
131,698 - +1.5
131,698 - +0.2
131,698 - -1.4
133,065 + -0.2
133,065 + -0.7
133,065 + -0.1
133,066 - -1.6
133,066 - -1.4
133,066 - -0.1
133,066 - -1.5
133,066 - +1.1
133,256 + MPMX19_00120 0.26 -1.3
133,256 + MPMX19_00120 0.26 +0.5
133,256 + MPMX19_00120 0.26 +0.7
133,256 + MPMX19_00120 0.26 -0.2
133,257 - MPMX19_00120 0.26 -0.3
133,257 - MPMX19_00120 0.26 -2.5
133,257 - MPMX19_00120 0.26 -0.2
133,257 - MPMX19_00120 0.26 -1.8
133,257 - MPMX19_00120 0.26 +0.0
133,436 + MPMX19_00120 0.56 -2.0
133,436 + MPMX19_00120 0.56 -0.1
133,436 + MPMX19_00120 0.56 -1.9
133,436 + MPMX19_00120 0.56 -2.2
133,436 + MPMX19_00120 0.56 -1.1
133,437 - MPMX19_00120 0.57 -0.5
133,437 - MPMX19_00120 0.57 +1.2
133,437 - MPMX19_00120 0.57 -1.4
133,452 - MPMX19_00120 0.59 -0.8
133,960 + MPMX19_00121 0.61 -1.9
133,960 + MPMX19_00121 0.61 -2.1
133,960 + MPMX19_00121 0.61 -0.4
133,960 + MPMX19_00121 0.61 -0.5
133,960 + MPMX19_00121 0.61 -1.0
133,961 - MPMX19_00121 0.62 -0.8
133,961 - MPMX19_00121 0.62 -1.3
133,961 - MPMX19_00121 0.62 -1.0
133,961 - MPMX19_00121 0.62 +0.2
133,961 - MPMX19_00121 0.62 +0.7
133,961 - MPMX19_00121 0.62 -0.6
133,961 - MPMX19_00121 0.62 -2.3
133,990 + MPMX19_00121 0.68 -0.8
133,990 + MPMX19_00121 0.68 -0.0
133,990 + MPMX19_00121 0.68 -1.9
133,990 + MPMX19_00121 0.68 -1.4
133,990 + MPMX19_00121 0.68 -1.0
133,990 + MPMX19_00121 0.68 -1.2
133,990 + MPMX19_00121 0.68 -1.1
133,990 + MPMX19_00121 0.68 -1.6
133,990 + MPMX19_00121 0.68 -1.8
133,990 + MPMX19_00121 0.68 -1.7
133,990 + MPMX19_00121 0.68 -1.7
133,990 + MPMX19_00121 0.68 -2.0
133,990 + MPMX19_00121 0.68 -1.1
133,990 + MPMX19_00121 0.68 -1.1
133,990 + MPMX19_00121 0.68 -1.6
133,990 + MPMX19_00121 0.68 -1.4
133,990 + MPMX19_00121 0.68 -0.8
133,990 + MPMX19_00121 0.68 -2.3
133,990 + MPMX19_00121 0.68 +0.9
133,990 + MPMX19_00121 0.68 -1.8
133,990 + MPMX19_00121 0.68 -2.7
133,990 + MPMX19_00121 0.68 -0.7
133,990 + MPMX19_00121 0.68 -1.6
133,990 + MPMX19_00121 0.68 -2.4
133,991 - MPMX19_00121 0.68 -0.2
133,991 - MPMX19_00121 0.68 +0.7
133,991 - MPMX19_00121 0.68 -2.1
133,991 - MPMX19_00121 0.68 -1.2
133,991 - MPMX19_00121 0.68 -1.1
133,991 - MPMX19_00121 0.68 +0.4
133,991 - MPMX19_00121 0.68 +1.0
133,991 - MPMX19_00121 0.68 -0.1
133,991 - MPMX19_00121 0.68 -0.7
133,991 - MPMX19_00121 0.68 -0.2
133,991 - MPMX19_00121 0.68 -0.3
133,991 - MPMX19_00121 0.68 +0.2
133,991 - MPMX19_00121 0.68 -0.7
133,991 - MPMX19_00121 0.68 -1.5
133,991 - MPMX19_00121 0.68 +0.0
133,991 - MPMX19_00121 0.68 +1.1
133,991 - MPMX19_00121 0.68 +0.3
133,991 - MPMX19_00121 0.68 +0.7
133,991 - MPMX19_00121 0.68 +0.0
133,991 - MPMX19_00121 0.68 -1.1
133,991 - MPMX19_00121 0.68 +0.3
134,053 + MPMX19_00121 0.82 -1.1
134,053 + MPMX19_00121 0.82 +0.2
134,054 - MPMX19_00121 0.83 +0.9

Or see this region's nucleotide sequence