Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00101 and MPMX19_00102 are separated by 110 nucleotides MPMX19_00102 and MPMX19_00103 are separated by 300 nucleotides MPMX19_00103 and MPMX19_00104 are separated by 41 nucleotides
MPMX19_00101: MPMX19_00101 - Formyl-CoA:oxalate CoA-transferase, at 107,561 to 108,811
_00101
MPMX19_00102: MPMX19_00102 - hypothetical protein, at 108,922 to 109,395
_00102
MPMX19_00103: MPMX19_00103 - Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, at 109,696 to 110,946
_00103
MPMX19_00104: MPMX19_00104 - 2-oxoglutarate dehydrogenase E1 component, at 110,988 to 113,942
_00104
Position (kb)
109
110
111 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 108.787 kb on + strand at 108.787 kb on + strand at 108.787 kb on + strand at 108.787 kb on + strand at 108.787 kb on + strand at 108.788 kb on - strand at 108.788 kb on - strand at 108.788 kb on - strand at 108.788 kb on - strand at 108.788 kb on - strand at 108.788 kb on - strand at 108.788 kb on - strand at 108.828 kb on + strand at 108.828 kb on + strand at 108.828 kb on + strand at 108.828 kb on + strand at 108.829 kb on - strand at 108.829 kb on - strand at 108.829 kb on - strand at 108.829 kb on - strand at 108.829 kb on - strand at 108.829 kb on - strand at 108.829 kb on - strand at 108.829 kb on - strand at 108.829 kb on - strand at 109.143 kb on - strand, within MPMX19_00102 at 109.499 kb on - strand at 109.499 kb on - strand at 109.687 kb on + strand at 109.687 kb on + strand at 109.689 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 108,787 + -0.8 108,787 + -0.6 108,787 + -0.3 108,787 + -1.1 108,787 + -1.3 108,788 - -0.8 108,788 - -0.8 108,788 - +1.1 108,788 - -1.2 108,788 - -2.2 108,788 - -1.7 108,788 - -2.9 108,828 + -2.2 108,828 + -0.2 108,828 + -2.8 108,828 + -2.0 108,829 - -0.6 108,829 - -1.7 108,829 - -1.0 108,829 - -0.8 108,829 - -1.8 108,829 - -1.8 108,829 - +0.3 108,829 - -0.9 108,829 - -0.7 109,143 - MPMX19_00102 0.47 -0.7 109,499 - -0.3 109,499 - -0.6 109,687 + -0.5 109,687 + +0.9 109,689 + +1.5
Or see this region's nucleotide sequence