Experiment: Aluminum potassium sulfate dodecahydrate 1 mM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_19910 and IAI46_19915 are separated by 76 nucleotides IAI46_19915 and IAI46_19920 are separated by 73 nucleotides IAI46_19920 and IAI46_19925 are separated by 123 nucleotides
IAI46_19910: IAI46_19910 - class 1b ribonucleoside-diphosphate reductase subunit beta, at 4,198,330 to 4,199,301
_19910
IAI46_19915: IAI46_19915 - DUF1289 domain-containing protein, at 4,199,378 to 4,199,590
_19915
IAI46_19920: IAI46_19920 - SDR family oxidoreductase, at 4,199,664 to 4,200,404
_19920
IAI46_19925: IAI46_19925 - LysR family transcriptional regulator, at 4,200,528 to 4,201,421
_19925
Position (kb)
4199
4200
4201 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4198.805 kb on + strand, within IAI46_19910 at 4198.828 kb on + strand, within IAI46_19910 at 4198.853 kb on - strand, within IAI46_19910 at 4198.853 kb on - strand, within IAI46_19910 at 4198.931 kb on - strand, within IAI46_19910 at 4198.933 kb on + strand, within IAI46_19910 at 4198.934 kb on - strand, within IAI46_19910 at 4198.934 kb on - strand, within IAI46_19910 at 4199.047 kb on + strand, within IAI46_19910 at 4199.107 kb on + strand, within IAI46_19910 at 4199.107 kb on + strand, within IAI46_19910 at 4199.108 kb on - strand, within IAI46_19910 at 4199.251 kb on + strand at 4199.262 kb on + strand at 4199.333 kb on - strand at 4199.373 kb on - strand at 4199.373 kb on - strand at 4199.379 kb on + strand at 4199.384 kb on - strand at 4199.522 kb on - strand, within IAI46_19915 at 4199.585 kb on + strand at 4199.586 kb on - strand at 4199.590 kb on + strand at 4199.591 kb on - strand at 4199.876 kb on + strand, within IAI46_19920 at 4199.877 kb on - strand, within IAI46_19920 at 4199.877 kb on - strand, within IAI46_19920 at 4199.944 kb on + strand, within IAI46_19920 at 4199.944 kb on + strand, within IAI46_19920 at 4199.944 kb on + strand, within IAI46_19920 at 4199.944 kb on + strand, within IAI46_19920 at 4199.944 kb on + strand, within IAI46_19920 at 4199.944 kb on + strand, within IAI46_19920 at 4199.944 kb on + strand, within IAI46_19920 at 4199.945 kb on - strand, within IAI46_19920 at 4199.945 kb on - strand, within IAI46_19920 at 4199.945 kb on - strand, within IAI46_19920 at 4199.954 kb on - strand, within IAI46_19920 at 4200.147 kb on - strand, within IAI46_19920 at 4200.295 kb on + strand, within IAI46_19920 at 4200.295 kb on + strand, within IAI46_19920 at 4200.295 kb on + strand, within IAI46_19920 at 4200.296 kb on - strand, within IAI46_19920 at 4200.296 kb on - strand, within IAI46_19920 at 4200.312 kb on - strand, within IAI46_19920 at 4200.351 kb on + strand at 4200.351 kb on + strand at 4200.352 kb on - strand at 4200.352 kb on - strand at 4200.411 kb on + strand at 4200.412 kb on - strand at 4200.439 kb on + strand at 4200.439 kb on + strand at 4200.439 kb on + strand at 4200.440 kb on - strand at 4200.524 kb on - strand at 4200.584 kb on + strand at 4200.720 kb on + strand, within IAI46_19925 at 4200.720 kb on + strand, within IAI46_19925 at 4200.721 kb on - strand, within IAI46_19925 at 4200.723 kb on + strand, within IAI46_19925 at 4200.724 kb on - strand, within IAI46_19925 at 4200.724 kb on - strand, within IAI46_19925 at 4200.917 kb on - strand, within IAI46_19925 at 4200.917 kb on - strand, within IAI46_19925 at 4200.978 kb on - strand, within IAI46_19925 at 4200.978 kb on - strand, within IAI46_19925 at 4201.137 kb on - strand, within IAI46_19925 at 4201.338 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum potassium sulfate dodecahydrate 1 mM, aerobic remove 4,198,805 + IAI46_19910 0.49 +0.2 4,198,828 + IAI46_19910 0.51 -0.2 4,198,853 - IAI46_19910 0.54 +0.0 4,198,853 - IAI46_19910 0.54 +0.8 4,198,931 - IAI46_19910 0.62 +0.7 4,198,933 + IAI46_19910 0.62 -1.0 4,198,934 - IAI46_19910 0.62 -0.2 4,198,934 - IAI46_19910 0.62 +1.0 4,199,047 + IAI46_19910 0.74 -0.0 4,199,107 + IAI46_19910 0.80 +1.2 4,199,107 + IAI46_19910 0.80 +0.3 4,199,108 - IAI46_19910 0.80 -0.1 4,199,251 + -0.3 4,199,262 + +0.7 4,199,333 - -0.0 4,199,373 - -1.5 4,199,373 - -0.2 4,199,379 + -1.0 4,199,384 - +0.3 4,199,522 - IAI46_19915 0.68 +0.1 4,199,585 + +1.7 4,199,586 - +0.0 4,199,590 + -0.9 4,199,591 - -1.8 4,199,876 + IAI46_19920 0.29 -0.4 4,199,877 - IAI46_19920 0.29 -0.2 4,199,877 - IAI46_19920 0.29 -0.5 4,199,944 + IAI46_19920 0.38 -0.4 4,199,944 + IAI46_19920 0.38 +0.4 4,199,944 + IAI46_19920 0.38 +0.8 4,199,944 + IAI46_19920 0.38 +0.0 4,199,944 + IAI46_19920 0.38 -1.2 4,199,944 + IAI46_19920 0.38 +0.5 4,199,944 + IAI46_19920 0.38 +0.5 4,199,945 - IAI46_19920 0.38 +0.5 4,199,945 - IAI46_19920 0.38 +0.3 4,199,945 - IAI46_19920 0.38 +0.2 4,199,954 - IAI46_19920 0.39 -0.5 4,200,147 - IAI46_19920 0.65 +0.3 4,200,295 + IAI46_19920 0.85 -0.2 4,200,295 + IAI46_19920 0.85 -1.4 4,200,295 + IAI46_19920 0.85 +0.2 4,200,296 - IAI46_19920 0.85 +0.4 4,200,296 - IAI46_19920 0.85 -0.0 4,200,312 - IAI46_19920 0.87 +0.4 4,200,351 + -1.1 4,200,351 + -0.8 4,200,352 - +0.1 4,200,352 - +0.3 4,200,411 + +0.1 4,200,412 - +2.4 4,200,439 + -1.2 4,200,439 + +1.3 4,200,439 + -0.5 4,200,440 - -0.5 4,200,524 - +0.9 4,200,584 + -0.9 4,200,720 + IAI46_19925 0.21 +0.5 4,200,720 + IAI46_19925 0.21 -0.6 4,200,721 - IAI46_19925 0.22 -0.1 4,200,723 + IAI46_19925 0.22 -0.7 4,200,724 - IAI46_19925 0.22 +0.3 4,200,724 - IAI46_19925 0.22 +0.7 4,200,917 - IAI46_19925 0.44 +0.2 4,200,917 - IAI46_19925 0.44 +0.2 4,200,978 - IAI46_19925 0.50 -0.8 4,200,978 - IAI46_19925 0.50 +0.5 4,201,137 - IAI46_19925 0.68 +0.5 4,201,338 + +0.9
Or see this region's nucleotide sequence