Experiment: Aluminum potassium sulfate dodecahydrate 1 mM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_19820 and IAI46_19825 are separated by 118 nucleotides IAI46_19825 and IAI46_19830 are separated by 48 nucleotides IAI46_19830 and IAI46_19835 are separated by 173 nucleotides IAI46_19835 and IAI46_19840 are separated by 66 nucleotides
IAI46_19820: IAI46_19820 - N-acetyltransferase, at 4,184,028 to 4,184,306
_19820
IAI46_19825: IAI46_19825 - DoxX family protein, at 4,184,425 to 4,184,838
_19825
IAI46_19830: IAI46_19830 - DNA endonuclease SmrA, at 4,184,887 to 4,185,459
_19830
IAI46_19835: IAI46_19835 - MbeD/MobD like protein, at 4,185,633 to 4,185,971
_19835
IAI46_19840: IAI46_19840 - DUF1198 family protein, at 4,186,038 to 4,186,484
_19840
Position (kb)
4184
4185
4186 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 4183.925 kb on + strand at 4183.939 kb on - strand at 4183.975 kb on + strand at 4184.037 kb on + strand at 4184.037 kb on + strand at 4184.038 kb on - strand at 4184.038 kb on - strand at 4184.038 kb on - strand at 4184.038 kb on - strand at 4184.038 kb on - strand at 4184.040 kb on - strand at 4184.048 kb on - strand at 4184.155 kb on - strand, within IAI46_19820 at 4184.267 kb on + strand, within IAI46_19820 at 4184.268 kb on - strand, within IAI46_19820 at 4184.269 kb on + strand, within IAI46_19820 at 4184.365 kb on - strand at 4184.367 kb on + strand at 4184.367 kb on + strand at 4184.368 kb on - strand at 4184.372 kb on + strand at 4184.373 kb on - strand at 4184.386 kb on + strand at 4184.386 kb on + strand at 4184.396 kb on + strand at 4184.396 kb on + strand at 4184.397 kb on - strand at 4184.493 kb on - strand, within IAI46_19825 at 4184.493 kb on - strand, within IAI46_19825 at 4184.493 kb on - strand, within IAI46_19825 at 4184.548 kb on + strand, within IAI46_19825 at 4184.554 kb on - strand, within IAI46_19825 at 4184.567 kb on - strand, within IAI46_19825 at 4184.567 kb on - strand, within IAI46_19825 at 4184.571 kb on - strand, within IAI46_19825 at 4184.581 kb on - strand, within IAI46_19825 at 4184.631 kb on - strand, within IAI46_19825 at 4184.665 kb on + strand, within IAI46_19825 at 4184.665 kb on + strand, within IAI46_19825 at 4184.665 kb on + strand, within IAI46_19825 at 4184.665 kb on + strand, within IAI46_19825 at 4184.666 kb on - strand, within IAI46_19825 at 4184.666 kb on - strand, within IAI46_19825 at 4184.833 kb on - strand at 4184.836 kb on + strand at 4184.837 kb on - strand at 4184.895 kb on + strand at 4184.896 kb on - strand at 4184.896 kb on - strand at 4184.957 kb on + strand, within IAI46_19830 at 4184.958 kb on - strand, within IAI46_19830 at 4184.958 kb on - strand, within IAI46_19830 at 4185.041 kb on + strand, within IAI46_19830 at 4185.041 kb on + strand, within IAI46_19830 at 4185.042 kb on - strand, within IAI46_19830 at 4185.042 kb on - strand, within IAI46_19830 at 4185.135 kb on + strand, within IAI46_19830 at 4185.259 kb on - strand, within IAI46_19830 at 4185.261 kb on - strand, within IAI46_19830 at 4185.354 kb on + strand, within IAI46_19830 at 4185.380 kb on + strand, within IAI46_19830 at 4185.481 kb on + strand at 4185.482 kb on - strand at 4185.482 kb on - strand at 4185.500 kb on + strand at 4185.500 kb on + strand at 4185.512 kb on + strand at 4185.512 kb on + strand at 4185.512 kb on + strand at 4185.591 kb on - strand at 4185.726 kb on + strand, within IAI46_19835 at 4185.726 kb on + strand, within IAI46_19835 at 4185.727 kb on - strand, within IAI46_19835 at 4185.727 kb on - strand, within IAI46_19835 at 4185.727 kb on - strand, within IAI46_19835 at 4185.759 kb on - strand, within IAI46_19835 at 4185.782 kb on + strand, within IAI46_19835 at 4185.782 kb on + strand, within IAI46_19835 at 4185.783 kb on - strand, within IAI46_19835 at 4185.783 kb on - strand, within IAI46_19835 at 4186.025 kb on + strand at 4186.026 kb on - strand at 4186.026 kb on - strand at 4186.028 kb on + strand at 4186.028 kb on + strand at 4186.029 kb on - strand at 4186.029 kb on - strand at 4186.072 kb on + strand at 4186.073 kb on - strand at 4186.076 kb on + strand at 4186.080 kb on - strand at 4186.080 kb on - strand at 4186.106 kb on + strand, within IAI46_19840 at 4186.154 kb on + strand, within IAI46_19840 at 4186.154 kb on + strand, within IAI46_19840 at 4186.154 kb on + strand, within IAI46_19840 at 4186.155 kb on - strand, within IAI46_19840 at 4186.155 kb on - strand, within IAI46_19840 at 4186.268 kb on + strand, within IAI46_19840 at 4186.268 kb on + strand, within IAI46_19840 at 4186.268 kb on + strand, within IAI46_19840 at 4186.268 kb on + strand, within IAI46_19840 at 4186.268 kb on + strand, within IAI46_19840 at 4186.269 kb on - strand, within IAI46_19840 at 4186.269 kb on - strand, within IAI46_19840 at 4186.269 kb on - strand, within IAI46_19840 at 4186.269 kb on - strand, within IAI46_19840 at 4186.272 kb on + strand, within IAI46_19840 at 4186.273 kb on - strand, within IAI46_19840 at 4186.273 kb on - strand, within IAI46_19840 at 4186.357 kb on + strand, within IAI46_19840 at 4186.357 kb on + strand, within IAI46_19840 at 4186.358 kb on - strand, within IAI46_19840 at 4186.358 kb on - strand, within IAI46_19840 at 4186.358 kb on - strand, within IAI46_19840 at 4186.358 kb on - strand, within IAI46_19840 at 4186.358 kb on - strand, within IAI46_19840 at 4186.358 kb on - strand, within IAI46_19840 at 4186.358 kb on - strand, within IAI46_19840 at 4186.444 kb on - strand at 4186.444 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum potassium sulfate dodecahydrate 1 mM, aerobic remove 4,183,925 + -0.4 4,183,939 - -0.2 4,183,975 + +0.3 4,184,037 + -1.8 4,184,037 + -0.3 4,184,038 - -0.1 4,184,038 - +0.5 4,184,038 - -0.6 4,184,038 - -0.3 4,184,038 - +0.8 4,184,040 - +0.3 4,184,048 - -0.7 4,184,155 - IAI46_19820 0.46 -0.5 4,184,267 + IAI46_19820 0.86 +1.2 4,184,268 - IAI46_19820 0.86 -0.1 4,184,269 + IAI46_19820 0.86 +1.2 4,184,365 - -0.4 4,184,367 + +0.8 4,184,367 + +0.9 4,184,368 - -0.4 4,184,372 + -0.1 4,184,373 - +0.4 4,184,386 + -0.8 4,184,386 + -0.2 4,184,396 + -2.0 4,184,396 + +0.3 4,184,397 - -0.4 4,184,493 - IAI46_19825 0.16 -0.3 4,184,493 - IAI46_19825 0.16 +0.7 4,184,493 - IAI46_19825 0.16 +0.5 4,184,548 + IAI46_19825 0.30 +0.2 4,184,554 - IAI46_19825 0.31 -1.0 4,184,567 - IAI46_19825 0.34 -0.1 4,184,567 - IAI46_19825 0.34 -1.0 4,184,571 - IAI46_19825 0.35 -0.4 4,184,581 - IAI46_19825 0.38 +0.1 4,184,631 - IAI46_19825 0.50 -0.4 4,184,665 + IAI46_19825 0.58 -0.1 4,184,665 + IAI46_19825 0.58 -0.2 4,184,665 + IAI46_19825 0.58 -0.1 4,184,665 + IAI46_19825 0.58 +0.1 4,184,666 - IAI46_19825 0.58 +0.2 4,184,666 - IAI46_19825 0.58 -0.5 4,184,833 - +1.5 4,184,836 + -0.5 4,184,837 - -0.6 4,184,895 + -0.0 4,184,896 - +0.6 4,184,896 - -0.2 4,184,957 + IAI46_19830 0.12 +0.2 4,184,958 - IAI46_19830 0.12 -0.6 4,184,958 - IAI46_19830 0.12 +0.3 4,185,041 + IAI46_19830 0.27 +1.2 4,185,041 + IAI46_19830 0.27 +0.6 4,185,042 - IAI46_19830 0.27 +1.1 4,185,042 - IAI46_19830 0.27 -0.2 4,185,135 + IAI46_19830 0.43 -0.9 4,185,259 - IAI46_19830 0.65 -1.8 4,185,261 - IAI46_19830 0.65 -1.3 4,185,354 + IAI46_19830 0.82 -0.0 4,185,380 + IAI46_19830 0.86 +0.6 4,185,481 + +0.8 4,185,482 - -0.4 4,185,482 - +0.8 4,185,500 + +0.9 4,185,500 + -0.5 4,185,512 + -0.9 4,185,512 + -1.4 4,185,512 + -0.7 4,185,591 - +0.6 4,185,726 + IAI46_19835 0.27 +2.2 4,185,726 + IAI46_19835 0.27 +0.3 4,185,727 - IAI46_19835 0.28 -0.8 4,185,727 - IAI46_19835 0.28 +1.3 4,185,727 - IAI46_19835 0.28 +0.8 4,185,759 - IAI46_19835 0.37 -0.5 4,185,782 + IAI46_19835 0.44 +1.4 4,185,782 + IAI46_19835 0.44 +0.8 4,185,783 - IAI46_19835 0.44 +0.5 4,185,783 - IAI46_19835 0.44 +1.4 4,186,025 + +0.9 4,186,026 - -0.1 4,186,026 - -0.1 4,186,028 + +2.4 4,186,028 + +0.3 4,186,029 - -0.0 4,186,029 - +1.1 4,186,072 + -1.5 4,186,073 - +0.3 4,186,076 + -0.5 4,186,080 - -0.1 4,186,080 - +0.2 4,186,106 + IAI46_19840 0.15 -0.0 4,186,154 + IAI46_19840 0.26 -0.3 4,186,154 + IAI46_19840 0.26 +1.2 4,186,154 + IAI46_19840 0.26 -1.1 4,186,155 - IAI46_19840 0.26 +0.0 4,186,155 - IAI46_19840 0.26 +0.7 4,186,268 + IAI46_19840 0.51 +0.3 4,186,268 + IAI46_19840 0.51 +0.7 4,186,268 + IAI46_19840 0.51 +0.7 4,186,268 + IAI46_19840 0.51 +0.8 4,186,268 + IAI46_19840 0.51 -0.1 4,186,269 - IAI46_19840 0.52 +0.4 4,186,269 - IAI46_19840 0.52 +0.5 4,186,269 - IAI46_19840 0.52 +0.3 4,186,269 - IAI46_19840 0.52 +3.3 4,186,272 + IAI46_19840 0.52 +0.8 4,186,273 - IAI46_19840 0.53 -0.3 4,186,273 - IAI46_19840 0.53 +0.3 4,186,357 + IAI46_19840 0.71 +1.1 4,186,357 + IAI46_19840 0.71 +0.8 4,186,358 - IAI46_19840 0.72 +0.6 4,186,358 - IAI46_19840 0.72 -0.8 4,186,358 - IAI46_19840 0.72 -0.1 4,186,358 - IAI46_19840 0.72 +0.4 4,186,358 - IAI46_19840 0.72 +0.3 4,186,358 - IAI46_19840 0.72 +0.8 4,186,358 - IAI46_19840 0.72 -0.3 4,186,444 - -0.6 4,186,444 - -0.4
Or see this region's nucleotide sequence