Strain Fitness in Serratia liquefaciens MT49 around IAI46_19555

Experiment: Aluminum potassium sulfate dodecahydrate 1 mM, aerobic

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntIAI46_19545 and IAI46_19550 overlap by 4 nucleotidesIAI46_19550 and IAI46_19555 are separated by 182 nucleotidesIAI46_19555 and IAI46_19560 are separated by 32 nucleotides IAI46_19545: IAI46_19545 - GTPase Era, at 4,130,891 to 4,131,799 _19545 IAI46_19550: IAI46_19550 - ribonuclease III, at 4,131,796 to 4,132,476 _19550 IAI46_19555: IAI46_19555 - signal peptidase I, at 4,132,659 to 4,133,636 _19555 IAI46_19560: IAI46_19560 - elongation factor 4, at 4,133,669 to 4,135,468 _19560 Position (kb) 4132 4133 4134Strain fitness (log2 ratio) -1 0 1at 4132.488 kb on - strandat 4132.494 kb on - strandat 4132.519 kb on - strandat 4132.635 kb on - strandat 4132.648 kb on + strandat 4132.648 kb on + strandat 4133.652 kb on - strandat 4133.675 kb on - strandat 4133.675 kb on - strandat 4133.727 kb on - strandat 4133.747 kb on - strandat 4133.747 kb on - strandat 4133.747 kb on - strandat 4133.756 kb on - strandat 4134.076 kb on - strand, within IAI46_19560at 4134.089 kb on - strand, within IAI46_19560at 4134.169 kb on - strand, within IAI46_19560at 4134.169 kb on - strand, within IAI46_19560at 4134.322 kb on - strand, within IAI46_19560at 4134.322 kb on - strand, within IAI46_19560at 4134.355 kb on - strand, within IAI46_19560at 4134.355 kb on - strand, within IAI46_19560at 4134.360 kb on - strand, within IAI46_19560at 4134.493 kb on - strand, within IAI46_19560at 4134.550 kb on - strand, within IAI46_19560at 4134.550 kb on - strand, within IAI46_19560at 4134.550 kb on - strand, within IAI46_19560

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Per-strain Table

Position Strand Gene LocusTag Fraction Aluminum potassium sulfate dodecahydrate 1 mM, aerobic
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4,132,488 - +0.1
4,132,494 - -0.2
4,132,519 - -0.0
4,132,635 - -0.9
4,132,648 + +1.0
4,132,648 + +0.4
4,133,652 - +1.1
4,133,675 - -0.3
4,133,675 - +0.4
4,133,727 - -0.0
4,133,747 - -0.8
4,133,747 - -1.6
4,133,747 - -0.9
4,133,756 - -0.2
4,134,076 - IAI46_19560 0.23 -0.7
4,134,089 - IAI46_19560 0.23 +0.0
4,134,169 - IAI46_19560 0.28 -0.7
4,134,169 - IAI46_19560 0.28 -0.9
4,134,322 - IAI46_19560 0.36 -0.0
4,134,322 - IAI46_19560 0.36 -1.0
4,134,355 - IAI46_19560 0.38 -1.1
4,134,355 - IAI46_19560 0.38 +0.3
4,134,360 - IAI46_19560 0.38 -1.3
4,134,493 - IAI46_19560 0.46 -1.0
4,134,550 - IAI46_19560 0.49 +0.0
4,134,550 - IAI46_19560 0.49 +0.1
4,134,550 - IAI46_19560 0.49 -1.6

Or see this region's nucleotide sequence