Experiment: Aluminum potassium sulfate dodecahydrate 1 mM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_16405 and IAI46_16410 are separated by 12 nucleotides IAI46_16410 and IAI46_16415 are separated by 81 nucleotides
IAI46_16405: IAI46_16405 - phenylacetic acid degradation operon negative regulatory protein PaaX, at 3,437,083 to 3,438,021
_16405
IAI46_16410: IAI46_16410 - phenylacetic acid degradation protein PaaY, at 3,438,034 to 3,438,630
_16410
IAI46_16415: IAI46_16415 - PLP-dependent aminotransferase family protein, at 3,438,712 to 3,440,193
_16415
Position (kb)
3438
3439 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3437.044 kb on + strand at 3437.044 kb on + strand at 3437.118 kb on + strand at 3437.119 kb on - strand at 3437.119 kb on - strand at 3437.165 kb on - strand at 3437.326 kb on + strand, within IAI46_16405 at 3437.326 kb on + strand, within IAI46_16405 at 3437.327 kb on - strand, within IAI46_16405 at 3437.346 kb on + strand, within IAI46_16405 at 3437.498 kb on + strand, within IAI46_16405 at 3437.588 kb on - strand, within IAI46_16405 at 3437.588 kb on - strand, within IAI46_16405 at 3437.609 kb on - strand, within IAI46_16405 at 3437.609 kb on - strand, within IAI46_16405 at 3437.772 kb on + strand, within IAI46_16405 at 3437.772 kb on + strand, within IAI46_16405 at 3437.777 kb on + strand, within IAI46_16405 at 3437.777 kb on + strand, within IAI46_16405 at 3437.777 kb on + strand, within IAI46_16405 at 3437.778 kb on - strand, within IAI46_16405 at 3437.778 kb on - strand, within IAI46_16405 at 3437.778 kb on - strand, within IAI46_16405 at 3437.780 kb on + strand, within IAI46_16405 at 3437.781 kb on - strand, within IAI46_16405 at 3437.781 kb on - strand, within IAI46_16405 at 3437.781 kb on - strand, within IAI46_16405 at 3437.781 kb on - strand, within IAI46_16405 at 3437.887 kb on - strand, within IAI46_16405 at 3437.890 kb on + strand, within IAI46_16405 at 3437.921 kb on - strand, within IAI46_16405 at 3438.017 kb on + strand at 3438.018 kb on - strand at 3438.018 kb on - strand at 3438.019 kb on + strand at 3438.020 kb on - strand at 3438.020 kb on - strand at 3438.033 kb on + strand at 3438.034 kb on - strand at 3438.034 kb on - strand at 3438.034 kb on - strand at 3438.085 kb on + strand at 3438.086 kb on - strand at 3438.089 kb on + strand at 3438.089 kb on + strand at 3438.089 kb on + strand at 3438.089 kb on + strand at 3438.090 kb on - strand at 3438.090 kb on - strand at 3438.090 kb on - strand at 3438.090 kb on - strand at 3438.105 kb on - strand, within IAI46_16410 at 3438.140 kb on - strand, within IAI46_16410 at 3438.141 kb on + strand, within IAI46_16410 at 3438.189 kb on + strand, within IAI46_16410 at 3438.189 kb on + strand, within IAI46_16410 at 3438.452 kb on + strand, within IAI46_16410 at 3438.531 kb on + strand, within IAI46_16410 at 3438.532 kb on - strand, within IAI46_16410 at 3438.628 kb on + strand at 3438.628 kb on + strand at 3438.629 kb on - strand at 3438.696 kb on - strand at 3438.781 kb on - strand at 3438.878 kb on + strand, within IAI46_16415 at 3439.164 kb on + strand, within IAI46_16415 at 3439.238 kb on + strand, within IAI46_16415 at 3439.238 kb on + strand, within IAI46_16415 at 3439.246 kb on + strand, within IAI46_16415 at 3439.381 kb on + strand, within IAI46_16415 at 3439.381 kb on + strand, within IAI46_16415 at 3439.539 kb on + strand, within IAI46_16415 at 3439.539 kb on + strand, within IAI46_16415 at 3439.540 kb on - strand, within IAI46_16415 at 3439.540 kb on - strand, within IAI46_16415 at 3439.618 kb on + strand, within IAI46_16415
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum potassium sulfate dodecahydrate 1 mM, aerobic remove 3,437,044 + +0.3 3,437,044 + -0.2 3,437,118 + +1.0 3,437,119 - +0.5 3,437,119 - -0.8 3,437,165 - -0.4 3,437,326 + IAI46_16405 0.26 -0.4 3,437,326 + IAI46_16405 0.26 -0.9 3,437,327 - IAI46_16405 0.26 -1.9 3,437,346 + IAI46_16405 0.28 -0.5 3,437,498 + IAI46_16405 0.44 +1.0 3,437,588 - IAI46_16405 0.54 +1.7 3,437,588 - IAI46_16405 0.54 +0.7 3,437,609 - IAI46_16405 0.56 +0.1 3,437,609 - IAI46_16405 0.56 +0.6 3,437,772 + IAI46_16405 0.73 -0.7 3,437,772 + IAI46_16405 0.73 +0.6 3,437,777 + IAI46_16405 0.74 -0.3 3,437,777 + IAI46_16405 0.74 +0.1 3,437,777 + IAI46_16405 0.74 -0.3 3,437,778 - IAI46_16405 0.74 +0.3 3,437,778 - IAI46_16405 0.74 -0.3 3,437,778 - IAI46_16405 0.74 +0.1 3,437,780 + IAI46_16405 0.74 +0.8 3,437,781 - IAI46_16405 0.74 -1.1 3,437,781 - IAI46_16405 0.74 +0.1 3,437,781 - IAI46_16405 0.74 +0.8 3,437,781 - IAI46_16405 0.74 -0.6 3,437,887 - IAI46_16405 0.86 -0.6 3,437,890 + IAI46_16405 0.86 +0.2 3,437,921 - IAI46_16405 0.89 +1.0 3,438,017 + +0.1 3,438,018 - +0.6 3,438,018 - +0.6 3,438,019 + +1.2 3,438,020 - -0.6 3,438,020 - -0.3 3,438,033 + +0.1 3,438,034 - +0.4 3,438,034 - -0.3 3,438,034 - -1.1 3,438,085 + -0.1 3,438,086 - +1.7 3,438,089 + -1.2 3,438,089 + +1.0 3,438,089 + -0.3 3,438,089 + +1.1 3,438,090 - +0.5 3,438,090 - +0.2 3,438,090 - -1.5 3,438,090 - +0.6 3,438,105 - IAI46_16410 0.12 -1.9 3,438,140 - IAI46_16410 0.18 +0.6 3,438,141 + IAI46_16410 0.18 -0.9 3,438,189 + IAI46_16410 0.26 -0.2 3,438,189 + IAI46_16410 0.26 -0.2 3,438,452 + IAI46_16410 0.70 -0.1 3,438,531 + IAI46_16410 0.83 +1.5 3,438,532 - IAI46_16410 0.83 +0.6 3,438,628 + +2.2 3,438,628 + -0.1 3,438,629 - +1.2 3,438,696 - +0.6 3,438,781 - +0.5 3,438,878 + IAI46_16415 0.11 +0.2 3,439,164 + IAI46_16415 0.30 +0.3 3,439,238 + IAI46_16415 0.35 -0.2 3,439,238 + IAI46_16415 0.35 +0.2 3,439,246 + IAI46_16415 0.36 -1.9 3,439,381 + IAI46_16415 0.45 -1.3 3,439,381 + IAI46_16415 0.45 -0.6 3,439,539 + IAI46_16415 0.56 -0.1 3,439,539 + IAI46_16415 0.56 +1.2 3,439,540 - IAI46_16415 0.56 -0.9 3,439,540 - IAI46_16415 0.56 -0.0 3,439,618 + IAI46_16415 0.61 -1.6
Or see this region's nucleotide sequence