Experiment: Aluminum potassium sulfate dodecahydrate 1 mM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_16075 and IAI46_16080 are separated by 44 nucleotides IAI46_16080 and IAI46_16085 are separated by 98 nucleotides IAI46_16085 and IAI46_16090 are separated by 34 nucleotides
IAI46_16075: IAI46_16075 - NADP-dependent oxidoreductase, at 3,371,433 to 3,372,467
_16075
IAI46_16080: IAI46_16080 - pyroglutamyl-peptidase I, at 3,372,512 to 3,373,159
_16080
IAI46_16085: IAI46_16085 - LysR family transcriptional regulator, at 3,373,258 to 3,374,187
_16085
IAI46_16090: IAI46_16090 - tryptophan 2,3-dioxygenase, at 3,374,222 to 3,375,064
_16090
Position (kb)
3373
3374
3375 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3372.266 kb on + strand, within IAI46_16075 at 3372.267 kb on - strand, within IAI46_16075 at 3372.466 kb on - strand at 3372.539 kb on + strand at 3372.540 kb on - strand at 3372.565 kb on + strand at 3372.565 kb on + strand at 3372.566 kb on - strand at 3372.575 kb on - strand at 3372.582 kb on - strand, within IAI46_16080 at 3372.652 kb on - strand, within IAI46_16080 at 3372.665 kb on - strand, within IAI46_16080 at 3372.736 kb on + strand, within IAI46_16080 at 3372.738 kb on + strand, within IAI46_16080 at 3372.738 kb on + strand, within IAI46_16080 at 3372.786 kb on - strand, within IAI46_16080 at 3373.092 kb on - strand, within IAI46_16080 at 3373.109 kb on - strand at 3373.233 kb on + strand at 3373.237 kb on + strand at 3373.237 kb on + strand at 3373.238 kb on - strand at 3373.241 kb on + strand at 3373.241 kb on + strand at 3373.241 kb on + strand at 3373.242 kb on - strand at 3373.242 kb on - strand at 3373.242 kb on - strand at 3373.242 kb on - strand at 3373.244 kb on - strand at 3373.244 kb on - strand at 3373.249 kb on - strand at 3373.700 kb on + strand, within IAI46_16085 at 3373.700 kb on + strand, within IAI46_16085 at 3373.701 kb on - strand, within IAI46_16085 at 3373.773 kb on + strand, within IAI46_16085 at 3373.774 kb on - strand, within IAI46_16085 at 3373.805 kb on + strand, within IAI46_16085 at 3373.835 kb on - strand, within IAI46_16085 at 3373.994 kb on + strand, within IAI46_16085 at 3374.391 kb on - strand, within IAI46_16090 at 3374.393 kb on - strand, within IAI46_16090 at 3374.431 kb on - strand, within IAI46_16090 at 3374.448 kb on + strand, within IAI46_16090 at 3374.448 kb on + strand, within IAI46_16090 at 3374.448 kb on + strand, within IAI46_16090 at 3374.448 kb on + strand, within IAI46_16090 at 3374.449 kb on - strand, within IAI46_16090 at 3374.459 kb on - strand, within IAI46_16090 at 3374.482 kb on + strand, within IAI46_16090 at 3374.491 kb on - strand, within IAI46_16090 at 3374.553 kb on + strand, within IAI46_16090 at 3374.554 kb on - strand, within IAI46_16090 at 3374.572 kb on - strand, within IAI46_16090 at 3374.840 kb on - strand, within IAI46_16090 at 3374.998 kb on - strand at 3374.998 kb on - strand at 3375.006 kb on + strand at 3375.006 kb on + strand at 3375.007 kb on - strand at 3375.007 kb on - strand at 3375.048 kb on - strand at 3375.070 kb on - strand at 3375.070 kb on - strand at 3375.155 kb on + strand at 3375.155 kb on + strand at 3375.156 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum potassium sulfate dodecahydrate 1 mM, aerobic remove 3,372,266 + IAI46_16075 0.80 -1.8 3,372,267 - IAI46_16075 0.81 +0.1 3,372,466 - +0.7 3,372,539 + +0.9 3,372,540 - +1.9 3,372,565 + -1.3 3,372,565 + +0.4 3,372,566 - +0.7 3,372,575 - -0.0 3,372,582 - IAI46_16080 0.11 +0.5 3,372,652 - IAI46_16080 0.22 +0.1 3,372,665 - IAI46_16080 0.24 +0.8 3,372,736 + IAI46_16080 0.35 +1.9 3,372,738 + IAI46_16080 0.35 -1.5 3,372,738 + IAI46_16080 0.35 -0.8 3,372,786 - IAI46_16080 0.42 +0.4 3,373,092 - IAI46_16080 0.90 -0.3 3,373,109 - +0.4 3,373,233 + -0.3 3,373,237 + +0.2 3,373,237 + -0.0 3,373,238 - +1.2 3,373,241 + +0.5 3,373,241 + -0.7 3,373,241 + +1.2 3,373,242 - +0.9 3,373,242 - -0.2 3,373,242 - -0.3 3,373,242 - -0.0 3,373,244 - -0.9 3,373,244 - -2.3 3,373,249 - -0.7 3,373,700 + IAI46_16085 0.48 +0.3 3,373,700 + IAI46_16085 0.48 -0.9 3,373,701 - IAI46_16085 0.48 +0.9 3,373,773 + IAI46_16085 0.55 -0.1 3,373,774 - IAI46_16085 0.55 -0.7 3,373,805 + IAI46_16085 0.59 +0.6 3,373,835 - IAI46_16085 0.62 -0.0 3,373,994 + IAI46_16085 0.79 +0.7 3,374,391 - IAI46_16090 0.20 +0.1 3,374,393 - IAI46_16090 0.20 -0.2 3,374,431 - IAI46_16090 0.25 -0.1 3,374,448 + IAI46_16090 0.27 +0.1 3,374,448 + IAI46_16090 0.27 -0.9 3,374,448 + IAI46_16090 0.27 +0.4 3,374,448 + IAI46_16090 0.27 +0.3 3,374,449 - IAI46_16090 0.27 +0.7 3,374,459 - IAI46_16090 0.28 +0.7 3,374,482 + IAI46_16090 0.31 -0.1 3,374,491 - IAI46_16090 0.32 +1.0 3,374,553 + IAI46_16090 0.39 -0.4 3,374,554 - IAI46_16090 0.39 -0.1 3,374,572 - IAI46_16090 0.42 -0.3 3,374,840 - IAI46_16090 0.73 +0.4 3,374,998 - +0.4 3,374,998 - +1.1 3,375,006 + +0.7 3,375,006 + +0.3 3,375,007 - +0.1 3,375,007 - +0.9 3,375,048 - +0.1 3,375,070 - +0.6 3,375,070 - +0.2 3,375,155 + +0.7 3,375,155 + -0.4 3,375,156 - +0.1
Or see this region's nucleotide sequence