Experiment: Aluminum potassium sulfate dodecahydrate 1 mM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_15790 and IAI46_15795 are separated by 281 nucleotides IAI46_15795 and IAI46_15800 are separated by 27 nucleotides IAI46_15800 and IAI46_15805 overlap by 1 nucleotides
IAI46_15790: IAI46_15790 - FliC/FljB family flagellin, at 3,316,382 to 3,317,620
_15790
IAI46_15795: IAI46_15795 - flagellar filament capping protein FliD, at 3,317,902 to 3,319,299
_15795
IAI46_15800: IAI46_15800 - flagellar export chaperone FliS, at 3,319,327 to 3,319,737
_15800
IAI46_15805: IAI46_15805 - flagella biosynthesis regulatory protein FliT, at 3,319,737 to 3,320,105
_15805
Position (kb)
3317
3318
3319
3320 Strain fitness (log2 ratio)
-2
-1
0
1 at 3316.940 kb on + strand, within IAI46_15790 at 3316.941 kb on - strand, within IAI46_15790 at 3316.948 kb on - strand, within IAI46_15790 at 3316.951 kb on + strand, within IAI46_15790 at 3316.952 kb on - strand, within IAI46_15790 at 3316.963 kb on + strand, within IAI46_15790 at 3316.964 kb on - strand, within IAI46_15790 at 3316.964 kb on - strand, within IAI46_15790 at 3316.977 kb on + strand, within IAI46_15790 at 3317.018 kb on - strand, within IAI46_15790 at 3317.053 kb on + strand, within IAI46_15790 at 3317.057 kb on + strand, within IAI46_15790 at 3317.081 kb on - strand, within IAI46_15790 at 3317.246 kb on - strand, within IAI46_15790 at 3317.312 kb on - strand, within IAI46_15790 at 3317.330 kb on + strand, within IAI46_15790 at 3317.365 kb on + strand, within IAI46_15790 at 3317.605 kb on + strand at 3317.610 kb on - strand at 3317.624 kb on - strand at 3317.634 kb on + strand at 3317.635 kb on - strand at 3317.635 kb on - strand at 3317.662 kb on - strand at 3317.665 kb on + strand at 3317.804 kb on + strand at 3317.834 kb on + strand at 3317.885 kb on - strand at 3317.887 kb on + strand at 3317.887 kb on + strand at 3317.897 kb on + strand at 3317.898 kb on - strand at 3317.921 kb on + strand at 3317.998 kb on + strand at 3318.019 kb on + strand at 3318.020 kb on - strand at 3318.041 kb on - strand at 3318.074 kb on - strand, within IAI46_15795 at 3318.181 kb on + strand, within IAI46_15795 at 3318.181 kb on + strand, within IAI46_15795 at 3318.181 kb on + strand, within IAI46_15795 at 3318.181 kb on + strand, within IAI46_15795 at 3318.182 kb on - strand, within IAI46_15795 at 3318.240 kb on + strand, within IAI46_15795 at 3318.378 kb on + strand, within IAI46_15795 at 3318.504 kb on + strand, within IAI46_15795 at 3318.504 kb on + strand, within IAI46_15795 at 3318.504 kb on + strand, within IAI46_15795 at 3318.505 kb on - strand, within IAI46_15795 at 3318.505 kb on - strand, within IAI46_15795 at 3318.757 kb on + strand, within IAI46_15795 at 3318.757 kb on + strand, within IAI46_15795 at 3318.757 kb on + strand, within IAI46_15795 at 3318.757 kb on + strand, within IAI46_15795 at 3318.757 kb on + strand, within IAI46_15795 at 3318.757 kb on + strand, within IAI46_15795 at 3318.758 kb on - strand, within IAI46_15795 at 3318.758 kb on - strand, within IAI46_15795 at 3318.758 kb on - strand, within IAI46_15795 at 3318.758 kb on - strand, within IAI46_15795 at 3318.758 kb on - strand, within IAI46_15795 at 3318.759 kb on + strand, within IAI46_15795 at 3318.760 kb on - strand, within IAI46_15795 at 3318.780 kb on + strand, within IAI46_15795 at 3318.796 kb on + strand, within IAI46_15795 at 3318.855 kb on + strand, within IAI46_15795 at 3318.886 kb on - strand, within IAI46_15795 at 3319.147 kb on - strand, within IAI46_15795 at 3319.147 kb on - strand, within IAI46_15795 at 3319.207 kb on - strand at 3319.217 kb on - strand at 3319.219 kb on - strand at 3319.297 kb on + strand at 3319.330 kb on + strand at 3319.330 kb on + strand at 3319.330 kb on + strand at 3319.330 kb on + strand at 3319.331 kb on - strand at 3319.331 kb on - strand at 3319.331 kb on - strand at 3319.354 kb on + strand at 3319.516 kb on - strand, within IAI46_15800 at 3319.592 kb on - strand, within IAI46_15800 at 3319.592 kb on - strand, within IAI46_15800 at 3319.597 kb on + strand, within IAI46_15800 at 3319.597 kb on + strand, within IAI46_15800 at 3319.598 kb on - strand, within IAI46_15800 at 3319.598 kb on - strand, within IAI46_15800 at 3319.598 kb on - strand, within IAI46_15800 at 3319.599 kb on + strand, within IAI46_15800 at 3319.600 kb on - strand, within IAI46_15800 at 3319.600 kb on - strand, within IAI46_15800 at 3319.678 kb on - strand, within IAI46_15800 at 3319.678 kb on - strand, within IAI46_15800 at 3319.711 kb on + strand at 3319.712 kb on - strand at 3319.735 kb on + strand at 3319.779 kb on + strand, within IAI46_15805 at 3319.779 kb on + strand, within IAI46_15805 at 3319.779 kb on + strand, within IAI46_15805 at 3319.780 kb on - strand, within IAI46_15805 at 3319.782 kb on - strand, within IAI46_15805 at 3319.854 kb on + strand, within IAI46_15805 at 3319.854 kb on + strand, within IAI46_15805 at 3319.934 kb on + strand, within IAI46_15805 at 3320.052 kb on + strand, within IAI46_15805 at 3320.134 kb on + strand at 3320.139 kb on - strand at 3320.151 kb on + strand at 3320.152 kb on - strand at 3320.152 kb on - strand at 3320.155 kb on - strand at 3320.176 kb on - strand at 3320.198 kb on - strand at 3320.264 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum potassium sulfate dodecahydrate 1 mM, aerobic remove 3,316,940 + IAI46_15790 0.45 -0.7 3,316,941 - IAI46_15790 0.45 +0.5 3,316,948 - IAI46_15790 0.46 +0.3 3,316,951 + IAI46_15790 0.46 +0.4 3,316,952 - IAI46_15790 0.46 -1.1 3,316,963 + IAI46_15790 0.47 +0.1 3,316,964 - IAI46_15790 0.47 +0.6 3,316,964 - IAI46_15790 0.47 +0.9 3,316,977 + IAI46_15790 0.48 +0.1 3,317,018 - IAI46_15790 0.51 -0.3 3,317,053 + IAI46_15790 0.54 +1.2 3,317,057 + IAI46_15790 0.54 -0.3 3,317,081 - IAI46_15790 0.56 +0.1 3,317,246 - IAI46_15790 0.70 -1.7 3,317,312 - IAI46_15790 0.75 -0.2 3,317,330 + IAI46_15790 0.77 -0.5 3,317,365 + IAI46_15790 0.79 -0.1 3,317,605 + +1.1 3,317,610 - +0.1 3,317,624 - +1.0 3,317,634 + +0.5 3,317,635 - +0.3 3,317,635 - +0.6 3,317,662 - -0.5 3,317,665 + -0.2 3,317,804 + +0.8 3,317,834 + -0.5 3,317,885 - +0.6 3,317,887 + -0.7 3,317,887 + -0.5 3,317,897 + +0.4 3,317,898 - +0.4 3,317,921 + -1.0 3,317,998 + +0.3 3,318,019 + -0.8 3,318,020 - +0.5 3,318,041 - -0.1 3,318,074 - IAI46_15795 0.12 +0.5 3,318,181 + IAI46_15795 0.20 -0.6 3,318,181 + IAI46_15795 0.20 +0.0 3,318,181 + IAI46_15795 0.20 -0.4 3,318,181 + IAI46_15795 0.20 +0.1 3,318,182 - IAI46_15795 0.20 -0.8 3,318,240 + IAI46_15795 0.24 +0.3 3,318,378 + IAI46_15795 0.34 -1.6 3,318,504 + IAI46_15795 0.43 -0.0 3,318,504 + IAI46_15795 0.43 +0.0 3,318,504 + IAI46_15795 0.43 +0.6 3,318,505 - IAI46_15795 0.43 +0.5 3,318,505 - IAI46_15795 0.43 -0.2 3,318,757 + IAI46_15795 0.61 +0.9 3,318,757 + IAI46_15795 0.61 -1.2 3,318,757 + IAI46_15795 0.61 +0.4 3,318,757 + IAI46_15795 0.61 -0.1 3,318,757 + IAI46_15795 0.61 +0.4 3,318,757 + IAI46_15795 0.61 +0.1 3,318,758 - IAI46_15795 0.61 +0.0 3,318,758 - IAI46_15795 0.61 -0.3 3,318,758 - IAI46_15795 0.61 -1.5 3,318,758 - IAI46_15795 0.61 +1.2 3,318,758 - IAI46_15795 0.61 +0.6 3,318,759 + IAI46_15795 0.61 +0.7 3,318,760 - IAI46_15795 0.61 +0.4 3,318,780 + IAI46_15795 0.63 +1.3 3,318,796 + IAI46_15795 0.64 -1.2 3,318,855 + IAI46_15795 0.68 +0.6 3,318,886 - IAI46_15795 0.70 -1.6 3,319,147 - IAI46_15795 0.89 +1.0 3,319,147 - IAI46_15795 0.89 -0.6 3,319,207 - +0.0 3,319,217 - +0.2 3,319,219 - +0.9 3,319,297 + -0.8 3,319,330 + -1.1 3,319,330 + -0.7 3,319,330 + +0.2 3,319,330 + -0.2 3,319,331 - -0.1 3,319,331 - -1.6 3,319,331 - -0.2 3,319,354 + +0.4 3,319,516 - IAI46_15800 0.46 +0.7 3,319,592 - IAI46_15800 0.64 -0.2 3,319,592 - IAI46_15800 0.64 +0.4 3,319,597 + IAI46_15800 0.66 -1.6 3,319,597 + IAI46_15800 0.66 -1.0 3,319,598 - IAI46_15800 0.66 -0.2 3,319,598 - IAI46_15800 0.66 -0.4 3,319,598 - IAI46_15800 0.66 +0.6 3,319,599 + IAI46_15800 0.66 +0.3 3,319,600 - IAI46_15800 0.66 +0.2 3,319,600 - IAI46_15800 0.66 -0.2 3,319,678 - IAI46_15800 0.85 +0.4 3,319,678 - IAI46_15800 0.85 +0.7 3,319,711 + -1.0 3,319,712 - -0.0 3,319,735 + +0.0 3,319,779 + IAI46_15805 0.11 +0.0 3,319,779 + IAI46_15805 0.11 -0.2 3,319,779 + IAI46_15805 0.11 -0.2 3,319,780 - IAI46_15805 0.12 -2.0 3,319,782 - IAI46_15805 0.12 -2.1 3,319,854 + IAI46_15805 0.32 +1.2 3,319,854 + IAI46_15805 0.32 -0.5 3,319,934 + IAI46_15805 0.53 -0.6 3,320,052 + IAI46_15805 0.85 +0.8 3,320,134 + +0.5 3,320,139 - +1.1 3,320,151 + +0.5 3,320,152 - -0.2 3,320,152 - -0.7 3,320,155 - +0.5 3,320,176 - -1.1 3,320,198 - -0.2 3,320,264 - +0.6
Or see this region's nucleotide sequence