Experiment: Aluminum potassium sulfate dodecahydrate 1 mM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_15740 and IAI46_15745 are separated by 556 nucleotides IAI46_15745 and IAI46_15750 are separated by 166 nucleotides IAI46_15750 and IAI46_15755 are separated by 29 nucleotides IAI46_15755 and IAI46_15760 are separated by 31 nucleotides
IAI46_15740: IAI46_15740 - sodium/proline symporter PutP, at 3,304,618 to 3,306,102
_15740
IAI46_15745: IAI46_15745 - trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase, at 3,306,659 to 3,310,630
_15745
IAI46_15750: IAI46_15750 - type II toxin-antitoxin system HicA family toxin, at 3,310,797 to 3,310,979
_15750
IAI46_15755: IAI46_15755 - type II toxin-antitoxin system HicB family antitoxin, at 3,311,009 to 3,311,422
_15755
IAI46_15760: IAI46_15760 - L-cystine ABC transporter ATP-binding protein YecC, at 3,311,454 to 3,312,206
_15760
Position (kb)
3306
3307
3308
3309
3310
3311 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3305.684 kb on + strand, within IAI46_15740 at 3305.684 kb on + strand, within IAI46_15740 at 3305.684 kb on + strand, within IAI46_15740 at 3305.685 kb on - strand, within IAI46_15740 at 3305.685 kb on - strand, within IAI46_15740 at 3305.685 kb on - strand, within IAI46_15740 at 3305.688 kb on + strand, within IAI46_15740 at 3305.688 kb on + strand, within IAI46_15740 at 3305.863 kb on + strand, within IAI46_15740 at 3306.000 kb on - strand at 3306.000 kb on - strand at 3306.027 kb on - strand at 3306.035 kb on - strand at 3306.060 kb on + strand at 3306.063 kb on - strand at 3306.124 kb on + strand at 3306.125 kb on - strand at 3306.136 kb on + strand at 3306.137 kb on - strand at 3306.148 kb on + strand at 3306.149 kb on - strand at 3306.149 kb on - strand at 3306.206 kb on - strand at 3306.243 kb on - strand at 3306.584 kb on + strand at 3306.615 kb on + strand at 3306.638 kb on + strand at 3306.639 kb on - strand at 3306.776 kb on + strand at 3306.860 kb on - strand at 3306.860 kb on - strand at 3307.008 kb on + strand at 3307.046 kb on + strand at 3307.100 kb on - strand, within IAI46_15745 at 3307.330 kb on + strand, within IAI46_15745 at 3307.512 kb on - strand, within IAI46_15745 at 3307.622 kb on + strand, within IAI46_15745 at 3307.622 kb on + strand, within IAI46_15745 at 3307.623 kb on - strand, within IAI46_15745 at 3307.623 kb on - strand, within IAI46_15745 at 3307.695 kb on + strand, within IAI46_15745 at 3308.042 kb on + strand, within IAI46_15745 at 3308.058 kb on - strand, within IAI46_15745 at 3308.058 kb on - strand, within IAI46_15745 at 3308.148 kb on - strand, within IAI46_15745 at 3308.168 kb on + strand, within IAI46_15745 at 3308.254 kb on + strand, within IAI46_15745 at 3308.279 kb on + strand, within IAI46_15745 at 3308.347 kb on + strand, within IAI46_15745 at 3308.685 kb on - strand, within IAI46_15745 at 3308.685 kb on - strand, within IAI46_15745 at 3308.685 kb on - strand, within IAI46_15745 at 3308.915 kb on + strand, within IAI46_15745 at 3308.915 kb on + strand, within IAI46_15745 at 3308.915 kb on + strand, within IAI46_15745 at 3308.983 kb on + strand, within IAI46_15745 at 3308.984 kb on - strand, within IAI46_15745 at 3308.984 kb on - strand, within IAI46_15745 at 3309.424 kb on + strand, within IAI46_15745 at 3309.574 kb on + strand, within IAI46_15745 at 3309.608 kb on + strand, within IAI46_15745 at 3309.608 kb on + strand, within IAI46_15745 at 3309.609 kb on - strand, within IAI46_15745 at 3309.665 kb on - strand, within IAI46_15745 at 3309.879 kb on - strand, within IAI46_15745 at 3309.879 kb on - strand, within IAI46_15745 at 3309.974 kb on + strand, within IAI46_15745 at 3310.182 kb on + strand, within IAI46_15745 at 3310.183 kb on - strand, within IAI46_15745 at 3310.220 kb on + strand, within IAI46_15745 at 3310.220 kb on + strand, within IAI46_15745 at 3310.221 kb on - strand, within IAI46_15745 at 3310.221 kb on - strand, within IAI46_15745 at 3310.221 kb on - strand, within IAI46_15745 at 3310.221 kb on - strand, within IAI46_15745 at 3310.439 kb on + strand at 3310.727 kb on + strand at 3310.727 kb on + strand at 3310.825 kb on + strand, within IAI46_15750 at 3310.825 kb on + strand, within IAI46_15750 at 3310.826 kb on - strand, within IAI46_15750 at 3310.977 kb on + strand at 3311.258 kb on - strand, within IAI46_15755 at 3311.260 kb on + strand, within IAI46_15755 at 3311.260 kb on + strand, within IAI46_15755 at 3311.260 kb on + strand, within IAI46_15755 at 3311.260 kb on + strand, within IAI46_15755 at 3311.261 kb on - strand, within IAI46_15755 at 3311.269 kb on + strand, within IAI46_15755 at 3311.269 kb on + strand, within IAI46_15755 at 3311.293 kb on + strand, within IAI46_15755 at 3311.302 kb on + strand, within IAI46_15755 at 3311.302 kb on + strand, within IAI46_15755 at 3311.303 kb on - strand, within IAI46_15755 at 3311.303 kb on - strand, within IAI46_15755 at 3311.331 kb on + strand, within IAI46_15755 at 3311.332 kb on - strand, within IAI46_15755 at 3311.402 kb on + strand at 3311.455 kb on + strand at 3311.456 kb on - strand at 3311.489 kb on + strand at 3311.490 kb on - strand at 3311.544 kb on - strand, within IAI46_15760
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum potassium sulfate dodecahydrate 1 mM, aerobic remove 3,305,684 + IAI46_15740 0.72 +0.5 3,305,684 + IAI46_15740 0.72 -0.4 3,305,684 + IAI46_15740 0.72 +1.0 3,305,685 - IAI46_15740 0.72 +1.4 3,305,685 - IAI46_15740 0.72 -0.4 3,305,685 - IAI46_15740 0.72 -0.7 3,305,688 + IAI46_15740 0.72 -0.1 3,305,688 + IAI46_15740 0.72 +0.4 3,305,863 + IAI46_15740 0.84 -0.4 3,306,000 - -0.3 3,306,000 - +0.4 3,306,027 - -0.6 3,306,035 - -0.2 3,306,060 + +0.7 3,306,063 - -0.2 3,306,124 + +0.2 3,306,125 - -0.6 3,306,136 + +0.9 3,306,137 - +0.3 3,306,148 + -1.0 3,306,149 - +0.4 3,306,149 - -0.6 3,306,206 - +0.3 3,306,243 - +0.6 3,306,584 + +0.1 3,306,615 + +0.0 3,306,638 + +0.1 3,306,639 - -0.1 3,306,776 + -0.1 3,306,860 - -0.2 3,306,860 - +0.1 3,307,008 + -0.0 3,307,046 + +0.2 3,307,100 - IAI46_15745 0.11 -0.5 3,307,330 + IAI46_15745 0.17 +0.1 3,307,512 - IAI46_15745 0.21 -1.0 3,307,622 + IAI46_15745 0.24 +0.2 3,307,622 + IAI46_15745 0.24 +0.9 3,307,623 - IAI46_15745 0.24 -0.2 3,307,623 - IAI46_15745 0.24 +0.1 3,307,695 + IAI46_15745 0.26 +0.6 3,308,042 + IAI46_15745 0.35 -0.2 3,308,058 - IAI46_15745 0.35 +0.0 3,308,058 - IAI46_15745 0.35 -0.7 3,308,148 - IAI46_15745 0.37 +0.2 3,308,168 + IAI46_15745 0.38 +0.1 3,308,254 + IAI46_15745 0.40 -0.1 3,308,279 + IAI46_15745 0.41 -0.1 3,308,347 + IAI46_15745 0.42 +0.9 3,308,685 - IAI46_15745 0.51 -1.4 3,308,685 - IAI46_15745 0.51 +0.7 3,308,685 - IAI46_15745 0.51 +0.2 3,308,915 + IAI46_15745 0.57 +0.2 3,308,915 + IAI46_15745 0.57 -0.4 3,308,915 + IAI46_15745 0.57 -0.6 3,308,983 + IAI46_15745 0.59 +0.6 3,308,984 - IAI46_15745 0.59 -0.7 3,308,984 - IAI46_15745 0.59 +0.8 3,309,424 + IAI46_15745 0.70 +0.9 3,309,574 + IAI46_15745 0.73 -0.8 3,309,608 + IAI46_15745 0.74 +0.8 3,309,608 + IAI46_15745 0.74 +0.0 3,309,609 - IAI46_15745 0.74 +0.1 3,309,665 - IAI46_15745 0.76 +0.0 3,309,879 - IAI46_15745 0.81 -0.2 3,309,879 - IAI46_15745 0.81 +0.8 3,309,974 + IAI46_15745 0.83 +0.9 3,310,182 + IAI46_15745 0.89 +1.1 3,310,183 - IAI46_15745 0.89 +0.5 3,310,220 + IAI46_15745 0.90 -0.4 3,310,220 + IAI46_15745 0.90 -0.1 3,310,221 - IAI46_15745 0.90 +0.8 3,310,221 - IAI46_15745 0.90 +0.7 3,310,221 - IAI46_15745 0.90 -0.4 3,310,221 - IAI46_15745 0.90 -0.4 3,310,439 + +0.2 3,310,727 + -2.4 3,310,727 + -1.0 3,310,825 + IAI46_15750 0.15 -0.7 3,310,825 + IAI46_15750 0.15 +0.2 3,310,826 - IAI46_15750 0.16 -0.9 3,310,977 + -1.4 3,311,258 - IAI46_15755 0.60 -1.8 3,311,260 + IAI46_15755 0.61 -1.8 3,311,260 + IAI46_15755 0.61 -0.1 3,311,260 + IAI46_15755 0.61 -1.7 3,311,260 + IAI46_15755 0.61 +0.9 3,311,261 - IAI46_15755 0.61 -0.9 3,311,269 + IAI46_15755 0.63 +1.0 3,311,269 + IAI46_15755 0.63 -1.4 3,311,293 + IAI46_15755 0.69 -0.5 3,311,302 + IAI46_15755 0.71 +0.3 3,311,302 + IAI46_15755 0.71 +0.8 3,311,303 - IAI46_15755 0.71 +0.8 3,311,303 - IAI46_15755 0.71 +0.7 3,311,331 + IAI46_15755 0.78 +0.1 3,311,332 - IAI46_15755 0.78 +0.0 3,311,402 + +0.1 3,311,455 + +1.9 3,311,456 - +0.1 3,311,489 + -2.2 3,311,490 - -0.8 3,311,544 - IAI46_15760 0.12 +0.1
Or see this region's nucleotide sequence