Experiment: Aluminum potassium sulfate dodecahydrate 1 mM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_14190 and IAI46_14195 are separated by 11 nucleotides IAI46_14195 and IAI46_14200 are separated by 14 nucleotides IAI46_14200 and IAI46_14205 are separated by 83 nucleotides
IAI46_14190: IAI46_14190 - ABC transporter ATP-binding protein, at 3,010,888 to 3,011,904
_14190
IAI46_14195: IAI46_14195 - oligopeptide ABC transporter permease OppC, at 3,011,916 to 3,012,824
_14195
IAI46_14200: IAI46_14200 - oligopeptide ABC transporter permease OppB, at 3,012,839 to 3,013,759
_14200
IAI46_14205: IAI46_14205 - oligopeptide ABC transporter substrate-binding protein OppA, at 3,013,843 to 3,015,480
_14205
Position (kb)
3012
3013
3014 Strain fitness (log2 ratio)
-2
-1
0
1 at 3011.918 kb on - strand at 3012.073 kb on - strand, within IAI46_14195 at 3012.136 kb on - strand, within IAI46_14195 at 3012.152 kb on - strand, within IAI46_14195 at 3012.309 kb on - strand, within IAI46_14195 at 3012.519 kb on - strand, within IAI46_14195 at 3012.577 kb on + strand, within IAI46_14195 at 3012.634 kb on + strand, within IAI46_14195 at 3012.690 kb on + strand, within IAI46_14195 at 3012.840 kb on + strand at 3012.841 kb on - strand at 3012.945 kb on + strand, within IAI46_14200 at 3012.946 kb on - strand, within IAI46_14200 at 3013.101 kb on - strand, within IAI46_14200 at 3013.204 kb on + strand, within IAI46_14200 at 3013.207 kb on - strand, within IAI46_14200 at 3013.517 kb on - strand, within IAI46_14200 at 3013.518 kb on + strand, within IAI46_14200 at 3013.519 kb on - strand, within IAI46_14200 at 3013.563 kb on + strand, within IAI46_14200 at 3013.572 kb on + strand, within IAI46_14200 at 3013.745 kb on + strand at 3013.797 kb on + strand at 3013.798 kb on - strand at 3013.837 kb on - strand at 3013.837 kb on - strand at 3013.842 kb on - strand at 3013.859 kb on + strand at 3013.860 kb on - strand at 3013.917 kb on - strand at 3013.917 kb on - strand at 3013.946 kb on + strand at 3013.947 kb on - strand at 3014.073 kb on + strand, within IAI46_14205 at 3014.128 kb on - strand, within IAI46_14205 at 3014.138 kb on + strand, within IAI46_14205 at 3014.283 kb on + strand, within IAI46_14205 at 3014.574 kb on - strand, within IAI46_14205 at 3014.576 kb on + strand, within IAI46_14205 at 3014.577 kb on - strand, within IAI46_14205 at 3014.579 kb on + strand, within IAI46_14205 at 3014.579 kb on + strand, within IAI46_14205 at 3014.579 kb on + strand, within IAI46_14205 at 3014.580 kb on - strand, within IAI46_14205 at 3014.580 kb on - strand, within IAI46_14205 at 3014.583 kb on + strand, within IAI46_14205 at 3014.583 kb on + strand, within IAI46_14205 at 3014.584 kb on - strand, within IAI46_14205 at 3014.591 kb on + strand, within IAI46_14205 at 3014.591 kb on + strand, within IAI46_14205 at 3014.599 kb on + strand, within IAI46_14205 at 3014.661 kb on + strand, within IAI46_14205 at 3014.662 kb on - strand, within IAI46_14205
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum potassium sulfate dodecahydrate 1 mM, aerobic remove 3,011,918 - +1.2 3,012,073 - IAI46_14195 0.17 -0.7 3,012,136 - IAI46_14195 0.24 +0.1 3,012,152 - IAI46_14195 0.26 +0.1 3,012,309 - IAI46_14195 0.43 -0.2 3,012,519 - IAI46_14195 0.66 -0.7 3,012,577 + IAI46_14195 0.73 +0.8 3,012,634 + IAI46_14195 0.79 +0.5 3,012,690 + IAI46_14195 0.85 -0.3 3,012,840 + +0.3 3,012,841 - +0.9 3,012,945 + IAI46_14200 0.12 -0.9 3,012,946 - IAI46_14200 0.12 -0.8 3,013,101 - IAI46_14200 0.28 -0.4 3,013,204 + IAI46_14200 0.40 +0.2 3,013,207 - IAI46_14200 0.40 +0.2 3,013,517 - IAI46_14200 0.74 -0.6 3,013,518 + IAI46_14200 0.74 +0.5 3,013,519 - IAI46_14200 0.74 -0.6 3,013,563 + IAI46_14200 0.79 +1.2 3,013,572 + IAI46_14200 0.80 -0.2 3,013,745 + +0.2 3,013,797 + +1.1 3,013,798 - +0.9 3,013,837 - +0.4 3,013,837 - -0.5 3,013,842 - -1.8 3,013,859 + -1.3 3,013,860 - -0.5 3,013,917 - -0.9 3,013,917 - -0.2 3,013,946 + +0.2 3,013,947 - +0.9 3,014,073 + IAI46_14205 0.14 +0.9 3,014,128 - IAI46_14205 0.17 +0.8 3,014,138 + IAI46_14205 0.18 -0.5 3,014,283 + IAI46_14205 0.27 -0.4 3,014,574 - IAI46_14205 0.45 -0.2 3,014,576 + IAI46_14205 0.45 -1.3 3,014,577 - IAI46_14205 0.45 -1.3 3,014,579 + IAI46_14205 0.45 -1.0 3,014,579 + IAI46_14205 0.45 -0.1 3,014,579 + IAI46_14205 0.45 -0.1 3,014,580 - IAI46_14205 0.45 +1.2 3,014,580 - IAI46_14205 0.45 -0.5 3,014,583 + IAI46_14205 0.45 +0.1 3,014,583 + IAI46_14205 0.45 +1.1 3,014,584 - IAI46_14205 0.45 -1.9 3,014,591 + IAI46_14205 0.46 -0.7 3,014,591 + IAI46_14205 0.46 -0.8 3,014,599 + IAI46_14205 0.46 -0.5 3,014,661 + IAI46_14205 0.50 -0.6 3,014,662 - IAI46_14205 0.50 +0.4
Or see this region's nucleotide sequence