Experiment: Aluminum potassium sulfate dodecahydrate 1 mM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_12930 and IAI46_12935 are separated by 64 nucleotides IAI46_12935 and IAI46_12940 are separated by 32 nucleotides IAI46_12940 and IAI46_12945 overlap by 4 nucleotides
IAI46_12930: IAI46_12930 - sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC, at 2,757,782 to 2,758,897
_12930
IAI46_12935: IAI46_12935 - alpha-glucosidase, at 2,758,962 to 2,760,323
_12935
IAI46_12940: IAI46_12940 - carbohydrate ABC transporter permease, at 2,760,356 to 2,761,201
_12940
IAI46_12945: IAI46_12945 - sugar ABC transporter permease, at 2,761,198 to 2,762,193
_12945
Position (kb)
2758
2759
2760
2761 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2758.033 kb on + strand, within IAI46_12930 at 2758.100 kb on + strand, within IAI46_12930 at 2758.157 kb on + strand, within IAI46_12930 at 2758.157 kb on + strand, within IAI46_12930 at 2758.158 kb on - strand, within IAI46_12930 at 2758.158 kb on - strand, within IAI46_12930 at 2758.230 kb on + strand, within IAI46_12930 at 2758.230 kb on + strand, within IAI46_12930 at 2758.329 kb on + strand, within IAI46_12930 at 2758.329 kb on + strand, within IAI46_12930 at 2758.330 kb on - strand, within IAI46_12930 at 2758.330 kb on - strand, within IAI46_12930 at 2758.439 kb on - strand, within IAI46_12930 at 2758.439 kb on - strand, within IAI46_12930 at 2758.713 kb on + strand, within IAI46_12930 at 2758.713 kb on + strand, within IAI46_12930 at 2758.714 kb on - strand, within IAI46_12930 at 2758.714 kb on - strand, within IAI46_12930 at 2758.885 kb on + strand at 2758.886 kb on - strand at 2758.886 kb on - strand at 2758.886 kb on - strand at 2758.973 kb on - strand at 2759.222 kb on + strand, within IAI46_12935 at 2759.260 kb on - strand, within IAI46_12935 at 2759.260 kb on - strand, within IAI46_12935 at 2759.261 kb on + strand, within IAI46_12935 at 2759.261 kb on + strand, within IAI46_12935 at 2759.378 kb on - strand, within IAI46_12935 at 2759.386 kb on + strand, within IAI46_12935 at 2759.436 kb on - strand, within IAI46_12935 at 2759.586 kb on - strand, within IAI46_12935 at 2759.602 kb on + strand, within IAI46_12935 at 2759.641 kb on + strand, within IAI46_12935 at 2759.642 kb on - strand, within IAI46_12935 at 2759.642 kb on - strand, within IAI46_12935 at 2759.642 kb on - strand, within IAI46_12935 at 2759.696 kb on - strand, within IAI46_12935 at 2759.696 kb on - strand, within IAI46_12935 at 2759.786 kb on - strand, within IAI46_12935 at 2759.951 kb on + strand, within IAI46_12935 at 2759.999 kb on - strand, within IAI46_12935 at 2760.080 kb on + strand, within IAI46_12935 at 2760.622 kb on + strand, within IAI46_12940 at 2760.757 kb on + strand, within IAI46_12940 at 2760.759 kb on + strand, within IAI46_12940 at 2760.789 kb on + strand, within IAI46_12940 at 2760.880 kb on - strand, within IAI46_12940 at 2761.108 kb on - strand, within IAI46_12940 at 2761.174 kb on - strand at 2761.237 kb on - strand at 2761.270 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum potassium sulfate dodecahydrate 1 mM, aerobic remove 2,758,033 + IAI46_12930 0.22 +0.1 2,758,100 + IAI46_12930 0.28 -0.5 2,758,157 + IAI46_12930 0.34 -1.0 2,758,157 + IAI46_12930 0.34 -0.0 2,758,158 - IAI46_12930 0.34 +1.9 2,758,158 - IAI46_12930 0.34 -0.5 2,758,230 + IAI46_12930 0.40 +0.9 2,758,230 + IAI46_12930 0.40 +0.7 2,758,329 + IAI46_12930 0.49 +0.2 2,758,329 + IAI46_12930 0.49 +0.1 2,758,330 - IAI46_12930 0.49 -0.3 2,758,330 - IAI46_12930 0.49 -0.2 2,758,439 - IAI46_12930 0.59 -0.7 2,758,439 - IAI46_12930 0.59 +0.1 2,758,713 + IAI46_12930 0.83 +0.5 2,758,713 + IAI46_12930 0.83 +0.6 2,758,714 - IAI46_12930 0.84 -0.2 2,758,714 - IAI46_12930 0.84 +0.7 2,758,885 + +0.3 2,758,886 - -0.4 2,758,886 - -0.1 2,758,886 - -1.1 2,758,973 - -0.2 2,759,222 + IAI46_12935 0.19 -0.7 2,759,260 - IAI46_12935 0.22 +0.3 2,759,260 - IAI46_12935 0.22 -0.1 2,759,261 + IAI46_12935 0.22 +0.4 2,759,261 + IAI46_12935 0.22 -1.8 2,759,378 - IAI46_12935 0.31 -0.3 2,759,386 + IAI46_12935 0.31 +0.2 2,759,436 - IAI46_12935 0.35 +1.1 2,759,586 - IAI46_12935 0.46 +1.3 2,759,602 + IAI46_12935 0.47 -1.0 2,759,641 + IAI46_12935 0.50 +0.1 2,759,642 - IAI46_12935 0.50 -0.5 2,759,642 - IAI46_12935 0.50 +0.7 2,759,642 - IAI46_12935 0.50 +2.2 2,759,696 - IAI46_12935 0.54 -0.6 2,759,696 - IAI46_12935 0.54 -0.2 2,759,786 - IAI46_12935 0.60 +0.1 2,759,951 + IAI46_12935 0.73 -0.2 2,759,999 - IAI46_12935 0.76 -0.2 2,760,080 + IAI46_12935 0.82 +1.6 2,760,622 + IAI46_12940 0.31 +0.4 2,760,757 + IAI46_12940 0.47 -0.2 2,760,759 + IAI46_12940 0.48 +1.3 2,760,789 + IAI46_12940 0.51 +0.2 2,760,880 - IAI46_12940 0.62 -0.1 2,761,108 - IAI46_12940 0.89 -0.6 2,761,174 - +0.5 2,761,237 - -0.6 2,761,270 - +1.2
Or see this region's nucleotide sequence