Experiment: Aluminum potassium sulfate dodecahydrate 1 mM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_12480 and IAI46_12485 overlap by 7 nucleotides IAI46_12485 and IAI46_12490 are separated by 203 nucleotides
IAI46_12480: IAI46_12480 - HoxN/HupN/NixA family nickel/cobalt transporter, at 2,652,414 to 2,653,445
_12480
IAI46_12485: IAI46_12485 - carbamoyltransferase HypF, at 2,653,439 to 2,655,751
_12485
IAI46_12490: IAI46_12490 - formate dehydrogenase subunit alpha, at 2,655,955 to 2,658,111
_12490
Position (kb)
2653
2654
2655
2656 Strain fitness (log2 ratio)
-2
-1
0
1 at 2652.559 kb on - strand, within IAI46_12480 at 2652.652 kb on + strand, within IAI46_12480 at 2652.653 kb on - strand, within IAI46_12480 at 2652.671 kb on + strand, within IAI46_12480 at 2652.672 kb on - strand, within IAI46_12480 at 2652.791 kb on + strand, within IAI46_12480 at 2652.792 kb on - strand, within IAI46_12480 at 2652.792 kb on - strand, within IAI46_12480 at 2652.855 kb on + strand, within IAI46_12480 at 2652.872 kb on - strand, within IAI46_12480 at 2652.872 kb on - strand, within IAI46_12480 at 2652.887 kb on + strand, within IAI46_12480 at 2652.888 kb on - strand, within IAI46_12480 at 2652.957 kb on + strand, within IAI46_12480 at 2653.053 kb on + strand, within IAI46_12480 at 2653.448 kb on + strand at 2653.448 kb on + strand at 2653.448 kb on + strand at 2653.449 kb on - strand at 2653.449 kb on - strand at 2653.605 kb on - strand at 2653.654 kb on + strand at 2654.391 kb on + strand, within IAI46_12485 at 2654.437 kb on + strand, within IAI46_12485 at 2654.440 kb on - strand, within IAI46_12485 at 2654.604 kb on - strand, within IAI46_12485 at 2654.784 kb on - strand, within IAI46_12485 at 2654.902 kb on + strand, within IAI46_12485 at 2655.258 kb on + strand, within IAI46_12485 at 2655.318 kb on + strand, within IAI46_12485 at 2655.463 kb on + strand, within IAI46_12485 at 2655.463 kb on + strand, within IAI46_12485 at 2655.464 kb on - strand, within IAI46_12485 at 2655.517 kb on + strand, within IAI46_12485 at 2655.756 kb on + strand at 2655.757 kb on - strand at 2655.831 kb on + strand at 2655.832 kb on - strand at 2655.893 kb on + strand at 2655.894 kb on - strand at 2655.894 kb on - strand at 2655.894 kb on - strand at 2655.946 kb on - strand at 2655.956 kb on + strand at 2655.957 kb on - strand at 2655.957 kb on - strand at 2656.004 kb on + strand at 2656.148 kb on + strand at 2656.155 kb on + strand at 2656.155 kb on + strand at 2656.155 kb on + strand at 2656.157 kb on + strand at 2656.158 kb on - strand at 2656.158 kb on - strand at 2656.158 kb on - strand at 2656.158 kb on - strand at 2656.158 kb on - strand at 2656.173 kb on + strand, within IAI46_12490 at 2656.176 kb on + strand, within IAI46_12490 at 2656.176 kb on + strand, within IAI46_12490 at 2656.353 kb on - strand, within IAI46_12490 at 2656.353 kb on - strand, within IAI46_12490 at 2656.481 kb on + strand, within IAI46_12490 at 2656.488 kb on - strand, within IAI46_12490
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum potassium sulfate dodecahydrate 1 mM, aerobic remove 2,652,559 - IAI46_12480 0.14 -0.2 2,652,652 + IAI46_12480 0.23 -0.2 2,652,653 - IAI46_12480 0.23 +0.6 2,652,671 + IAI46_12480 0.25 +0.4 2,652,672 - IAI46_12480 0.25 +0.1 2,652,791 + IAI46_12480 0.37 +1.5 2,652,792 - IAI46_12480 0.37 +1.1 2,652,792 - IAI46_12480 0.37 +0.5 2,652,855 + IAI46_12480 0.43 -0.2 2,652,872 - IAI46_12480 0.44 -0.8 2,652,872 - IAI46_12480 0.44 +0.1 2,652,887 + IAI46_12480 0.46 +0.5 2,652,888 - IAI46_12480 0.46 -0.2 2,652,957 + IAI46_12480 0.53 +0.8 2,653,053 + IAI46_12480 0.62 +0.7 2,653,448 + +1.1 2,653,448 + +0.5 2,653,448 + -0.4 2,653,449 - -0.9 2,653,449 - +0.4 2,653,605 - +0.7 2,653,654 + +0.2 2,654,391 + IAI46_12485 0.41 +0.5 2,654,437 + IAI46_12485 0.43 +0.4 2,654,440 - IAI46_12485 0.43 +0.6 2,654,604 - IAI46_12485 0.50 -0.7 2,654,784 - IAI46_12485 0.58 -0.4 2,654,902 + IAI46_12485 0.63 +0.9 2,655,258 + IAI46_12485 0.79 -1.0 2,655,318 + IAI46_12485 0.81 -0.2 2,655,463 + IAI46_12485 0.88 -1.8 2,655,463 + IAI46_12485 0.88 +1.4 2,655,464 - IAI46_12485 0.88 -1.2 2,655,517 + IAI46_12485 0.90 -1.6 2,655,756 + -0.7 2,655,757 - +0.0 2,655,831 + -0.9 2,655,832 - +0.3 2,655,893 + +0.1 2,655,894 - -0.0 2,655,894 - -0.9 2,655,894 - +0.5 2,655,946 - +0.3 2,655,956 + -0.3 2,655,957 - -1.8 2,655,957 - -1.9 2,656,004 + -1.8 2,656,148 + +1.0 2,656,155 + -0.2 2,656,155 + +0.1 2,656,155 + -0.2 2,656,157 + +0.2 2,656,158 - -0.8 2,656,158 - +0.4 2,656,158 - +0.4 2,656,158 - +0.3 2,656,158 - -0.9 2,656,173 + IAI46_12490 0.10 -0.6 2,656,176 + IAI46_12490 0.10 -0.3 2,656,176 + IAI46_12490 0.10 +0.3 2,656,353 - IAI46_12490 0.18 +0.4 2,656,353 - IAI46_12490 0.18 -0.8 2,656,481 + IAI46_12490 0.24 +0.1 2,656,488 - IAI46_12490 0.25 -0.6
Or see this region's nucleotide sequence