Strain Fitness in Serratia liquefaciens MT49 around IAI46_09690

Experiment: Aluminum potassium sulfate dodecahydrate 1 mM, aerobic

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntIAI46_09685 and IAI46_09690 are separated by 38 nucleotidesIAI46_09690 and IAI46_09695 are separated by 23 nucleotides IAI46_09685: IAI46_09685 - rhodanese-related sulfurtransferase, at 2,054,493 to 2,055,563 _09685 IAI46_09690: IAI46_09690 - YceI family protein, at 2,055,602 to 2,056,180 _09690 IAI46_09695: IAI46_09695 - cytochrome b, at 2,056,204 to 2,056,758 _09695 Position (kb) 2055 2056 2057Strain fitness (log2 ratio) -1 0 1at 2054.628 kb on + strand, within IAI46_09685at 2054.628 kb on + strand, within IAI46_09685at 2054.629 kb on - strand, within IAI46_09685at 2054.668 kb on - strand, within IAI46_09685at 2054.668 kb on - strand, within IAI46_09685at 2054.668 kb on - strand, within IAI46_09685at 2054.780 kb on + strand, within IAI46_09685at 2054.815 kb on + strand, within IAI46_09685at 2054.895 kb on + strand, within IAI46_09685at 2054.895 kb on + strand, within IAI46_09685at 2055.017 kb on + strand, within IAI46_09685at 2055.065 kb on + strand, within IAI46_09685at 2055.087 kb on + strand, within IAI46_09685at 2055.087 kb on + strand, within IAI46_09685at 2055.088 kb on - strand, within IAI46_09685at 2055.101 kb on + strand, within IAI46_09685at 2055.126 kb on + strand, within IAI46_09685at 2055.128 kb on + strand, within IAI46_09685at 2055.128 kb on + strand, within IAI46_09685at 2055.129 kb on - strand, within IAI46_09685at 2055.156 kb on + strand, within IAI46_09685at 2055.525 kb on - strandat 2055.546 kb on - strandat 2055.764 kb on - strand, within IAI46_09690at 2056.033 kb on - strand, within IAI46_09690at 2056.044 kb on + strand, within IAI46_09690at 2056.044 kb on + strand, within IAI46_09690at 2056.180 kb on + strandat 2056.320 kb on - strand, within IAI46_09695at 2056.397 kb on - strand, within IAI46_09695at 2056.434 kb on - strand, within IAI46_09695at 2056.450 kb on - strand, within IAI46_09695at 2056.466 kb on + strand, within IAI46_09695at 2056.515 kb on - strand, within IAI46_09695at 2056.597 kb on - strand, within IAI46_09695at 2056.637 kb on + strand, within IAI46_09695at 2056.638 kb on - strand, within IAI46_09695at 2056.638 kb on - strand, within IAI46_09695at 2056.683 kb on - strand, within IAI46_09695at 2056.722 kb on + strandat 2056.723 kb on - strandat 2056.770 kb on - strandat 2056.794 kb on + strandat 2056.799 kb on - strandat 2056.836 kb on + strandat 2056.836 kb on + strandat 2056.837 kb on - strandat 2056.854 kb on + strandat 2056.879 kb on + strandat 2056.930 kb on - strandat 2057.090 kb on + strandat 2057.091 kb on - strandat 2057.098 kb on + strandat 2057.099 kb on - strandat 2057.132 kb on + strandat 2057.133 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Aluminum potassium sulfate dodecahydrate 1 mM, aerobic
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2,054,628 + IAI46_09685 0.13 +0.6
2,054,628 + IAI46_09685 0.13 +0.6
2,054,629 - IAI46_09685 0.13 -0.1
2,054,668 - IAI46_09685 0.16 -1.0
2,054,668 - IAI46_09685 0.16 -1.6
2,054,668 - IAI46_09685 0.16 -1.0
2,054,780 + IAI46_09685 0.27 -0.5
2,054,815 + IAI46_09685 0.30 +1.4
2,054,895 + IAI46_09685 0.38 -0.1
2,054,895 + IAI46_09685 0.38 -0.5
2,055,017 + IAI46_09685 0.49 +0.5
2,055,065 + IAI46_09685 0.53 -0.0
2,055,087 + IAI46_09685 0.55 +0.4
2,055,087 + IAI46_09685 0.55 +0.2
2,055,088 - IAI46_09685 0.56 +1.0
2,055,101 + IAI46_09685 0.57 +0.5
2,055,126 + IAI46_09685 0.59 +0.1
2,055,128 + IAI46_09685 0.59 -0.7
2,055,128 + IAI46_09685 0.59 -0.6
2,055,129 - IAI46_09685 0.59 -0.2
2,055,156 + IAI46_09685 0.62 -1.4
2,055,525 - -1.0
2,055,546 - +1.2
2,055,764 - IAI46_09690 0.28 -0.2
2,056,033 - IAI46_09690 0.74 -0.5
2,056,044 + IAI46_09690 0.76 -0.1
2,056,044 + IAI46_09690 0.76 +0.3
2,056,180 + +0.3
2,056,320 - IAI46_09695 0.21 +0.2
2,056,397 - IAI46_09695 0.35 +0.3
2,056,434 - IAI46_09695 0.41 +0.2
2,056,450 - IAI46_09695 0.44 +1.1
2,056,466 + IAI46_09695 0.47 -1.0
2,056,515 - IAI46_09695 0.56 -0.2
2,056,597 - IAI46_09695 0.71 +1.0
2,056,637 + IAI46_09695 0.78 +0.6
2,056,638 - IAI46_09695 0.78 -0.2
2,056,638 - IAI46_09695 0.78 +0.6
2,056,683 - IAI46_09695 0.86 -0.7
2,056,722 + -0.0
2,056,723 - -1.0
2,056,770 - -0.1
2,056,794 + +0.8
2,056,799 - +0.3
2,056,836 + +0.4
2,056,836 + +0.2
2,056,837 - +0.1
2,056,854 + -0.6
2,056,879 + +0.3
2,056,930 - +0.4
2,057,090 + -0.2
2,057,091 - +0.1
2,057,098 + +0.7
2,057,099 - -0.2
2,057,132 + +0.0
2,057,133 - +0.3

Or see this region's nucleotide sequence