Experiment: Aluminum potassium sulfate dodecahydrate 1 mM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_08780 and IAI46_08785 overlap by 4 nucleotides IAI46_08785 and IAI46_08790 are separated by 11 nucleotides IAI46_08790 and IAI46_08795 are separated by 16 nucleotides
IAI46_08780: IAI46_08780 - aliphatic sulfonates ABC transporter ATP-binding protein, at 1,884,479 to 1,885,255
_08780
IAI46_08785: IAI46_08785 - aliphatic sulfonate ABC transporter permease SsuC, at 1,885,252 to 1,886,046
_08785
IAI46_08790: IAI46_08790 - FMNH2-dependent alkanesulfonate monooxygenase, at 1,886,058 to 1,887,206
_08790
IAI46_08795: IAI46_08795 - sulfonate ABC transporter substrate-binding protein, at 1,887,223 to 1,888,188
_08795
Position (kb)
1886
1887
1888 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1885.191 kb on + strand at 1885.418 kb on + strand, within IAI46_08785 at 1885.473 kb on + strand, within IAI46_08785 at 1885.473 kb on + strand, within IAI46_08785 at 1885.473 kb on + strand, within IAI46_08785 at 1885.566 kb on - strand, within IAI46_08785 at 1885.616 kb on + strand, within IAI46_08785 at 1885.620 kb on + strand, within IAI46_08785 at 1885.629 kb on - strand, within IAI46_08785 at 1885.629 kb on - strand, within IAI46_08785 at 1885.827 kb on + strand, within IAI46_08785 at 1885.935 kb on + strand, within IAI46_08785 at 1885.977 kb on + strand at 1886.024 kb on - strand at 1886.046 kb on + strand at 1886.086 kb on + strand at 1886.086 kb on + strand at 1886.086 kb on + strand at 1886.087 kb on - strand at 1886.087 kb on - strand at 1886.087 kb on - strand at 1886.091 kb on - strand at 1886.091 kb on - strand at 1886.225 kb on + strand, within IAI46_08790 at 1886.736 kb on + strand, within IAI46_08790 at 1886.744 kb on + strand, within IAI46_08790 at 1887.003 kb on - strand, within IAI46_08790 at 1887.012 kb on + strand, within IAI46_08790 at 1887.012 kb on + strand, within IAI46_08790 at 1887.158 kb on - strand at 1887.211 kb on + strand at 1887.212 kb on - strand at 1887.259 kb on - strand at 1887.290 kb on + strand at 1887.374 kb on + strand, within IAI46_08795 at 1887.515 kb on + strand, within IAI46_08795 at 1887.534 kb on - strand, within IAI46_08795 at 1887.612 kb on - strand, within IAI46_08795 at 1887.869 kb on + strand, within IAI46_08795 at 1888.200 kb on - strand at 1888.200 kb on - strand at 1888.200 kb on - strand at 1888.201 kb on + strand at 1888.201 kb on + strand at 1888.201 kb on + strand at 1888.201 kb on + strand at 1888.201 kb on + strand at 1888.201 kb on + strand at 1888.201 kb on + strand at 1888.201 kb on + strand at 1888.202 kb on - strand at 1888.202 kb on - strand at 1888.202 kb on - strand at 1888.202 kb on - strand at 1888.203 kb on + strand at 1888.204 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum potassium sulfate dodecahydrate 1 mM, aerobic remove 1,885,191 + -0.8 1,885,418 + IAI46_08785 0.21 +1.5 1,885,473 + IAI46_08785 0.28 +1.1 1,885,473 + IAI46_08785 0.28 -0.6 1,885,473 + IAI46_08785 0.28 -1.2 1,885,566 - IAI46_08785 0.39 +1.2 1,885,616 + IAI46_08785 0.46 -0.5 1,885,620 + IAI46_08785 0.46 +0.8 1,885,629 - IAI46_08785 0.47 -0.1 1,885,629 - IAI46_08785 0.47 -0.1 1,885,827 + IAI46_08785 0.72 +0.8 1,885,935 + IAI46_08785 0.86 +0.8 1,885,977 + -0.0 1,886,024 - +1.1 1,886,046 + +0.8 1,886,086 + +0.4 1,886,086 + -2.5 1,886,086 + +1.7 1,886,087 - +0.5 1,886,087 - -0.2 1,886,087 - +0.3 1,886,091 - -0.1 1,886,091 - +0.4 1,886,225 + IAI46_08790 0.15 +0.2 1,886,736 + IAI46_08790 0.59 -0.1 1,886,744 + IAI46_08790 0.60 -1.4 1,887,003 - IAI46_08790 0.82 -0.1 1,887,012 + IAI46_08790 0.83 -1.0 1,887,012 + IAI46_08790 0.83 +0.9 1,887,158 - -0.3 1,887,211 + +0.4 1,887,212 - +2.4 1,887,259 - +0.9 1,887,290 + +0.2 1,887,374 + IAI46_08795 0.16 +0.1 1,887,515 + IAI46_08795 0.30 -2.1 1,887,534 - IAI46_08795 0.32 -0.8 1,887,612 - IAI46_08795 0.40 -1.2 1,887,869 + IAI46_08795 0.67 +0.8 1,888,200 - +0.2 1,888,200 - +1.1 1,888,200 - +1.1 1,888,201 + +1.1 1,888,201 + +1.0 1,888,201 + +0.1 1,888,201 + -0.9 1,888,201 + -0.2 1,888,201 + +1.0 1,888,201 + -2.1 1,888,201 + -0.2 1,888,202 - +0.7 1,888,202 - +0.3 1,888,202 - +1.3 1,888,202 - -0.7 1,888,203 + -0.5 1,888,204 - -0.7
Or see this region's nucleotide sequence