Experiment: Aluminum potassium sulfate dodecahydrate 1 mM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_06665 and IAI46_06670 are separated by 83 nucleotides IAI46_06670 and IAI46_06675 are separated by 53 nucleotides
IAI46_06665: IAI46_06665 - type 1 fimbrial protein, at 1,419,187 to 1,419,711
_06665
IAI46_06670: IAI46_06670 - type 1 fimbrial protein, at 1,419,795 to 1,420,340
_06670
IAI46_06675: IAI46_06675 - outer membrane usher protein, at 1,420,394 to 1,422,940
_06675
Position (kb)
1419
1420
1421 Strain fitness (log2 ratio)
-1
0
1
2 at 1419.168 kb on + strand at 1419.170 kb on + strand at 1419.180 kb on + strand at 1419.234 kb on + strand at 1419.235 kb on - strand at 1419.291 kb on + strand, within IAI46_06665 at 1419.292 kb on - strand, within IAI46_06665 at 1419.292 kb on - strand, within IAI46_06665 at 1419.355 kb on - strand, within IAI46_06665 at 1419.402 kb on + strand, within IAI46_06665 at 1419.432 kb on - strand, within IAI46_06665 at 1419.501 kb on + strand, within IAI46_06665 at 1419.693 kb on + strand at 1419.693 kb on + strand at 1419.709 kb on + strand at 1419.737 kb on + strand at 1419.737 kb on + strand at 1419.738 kb on - strand at 1419.768 kb on + strand at 1419.769 kb on - strand at 1419.769 kb on - strand at 1419.779 kb on + strand at 1419.779 kb on + strand at 1419.820 kb on + strand at 1419.821 kb on - strand at 1419.821 kb on - strand at 1419.839 kb on - strand at 1419.839 kb on - strand at 1419.843 kb on - strand at 1419.854 kb on - strand, within IAI46_06670 at 1419.898 kb on + strand, within IAI46_06670 at 1419.966 kb on - strand, within IAI46_06670 at 1420.028 kb on + strand, within IAI46_06670 at 1420.032 kb on - strand, within IAI46_06670 at 1420.054 kb on + strand, within IAI46_06670 at 1420.056 kb on - strand, within IAI46_06670 at 1420.159 kb on + strand, within IAI46_06670 at 1420.160 kb on - strand, within IAI46_06670 at 1420.303 kb on - strand at 1420.306 kb on - strand at 1420.375 kb on + strand at 1420.524 kb on + strand at 1420.525 kb on - strand at 1420.599 kb on - strand at 1420.615 kb on + strand at 1420.616 kb on - strand at 1420.616 kb on - strand at 1420.655 kb on + strand, within IAI46_06675 at 1420.693 kb on + strand, within IAI46_06675 at 1420.693 kb on + strand, within IAI46_06675 at 1420.835 kb on + strand, within IAI46_06675 at 1420.844 kb on - strand, within IAI46_06675 at 1420.844 kb on - strand, within IAI46_06675 at 1420.856 kb on + strand, within IAI46_06675 at 1420.857 kb on - strand, within IAI46_06675 at 1420.866 kb on - strand, within IAI46_06675 at 1420.866 kb on - strand, within IAI46_06675 at 1420.866 kb on - strand, within IAI46_06675 at 1420.867 kb on + strand, within IAI46_06675 at 1420.982 kb on + strand, within IAI46_06675 at 1420.983 kb on - strand, within IAI46_06675 at 1420.983 kb on - strand, within IAI46_06675 at 1420.983 kb on - strand, within IAI46_06675 at 1420.983 kb on - strand, within IAI46_06675 at 1420.983 kb on - strand, within IAI46_06675 at 1420.983 kb on - strand, within IAI46_06675 at 1420.984 kb on + strand, within IAI46_06675 at 1421.115 kb on - strand, within IAI46_06675 at 1421.117 kb on + strand, within IAI46_06675 at 1421.171 kb on + strand, within IAI46_06675 at 1421.176 kb on - strand, within IAI46_06675 at 1421.334 kb on - strand, within IAI46_06675 at 1421.334 kb on - strand, within IAI46_06675
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum potassium sulfate dodecahydrate 1 mM, aerobic remove 1,419,168 + -0.2 1,419,170 + +0.4 1,419,180 + +0.3 1,419,234 + +0.2 1,419,235 - -0.2 1,419,291 + IAI46_06665 0.20 -0.5 1,419,292 - IAI46_06665 0.20 -0.3 1,419,292 - IAI46_06665 0.20 +0.4 1,419,355 - IAI46_06665 0.32 +0.2 1,419,402 + IAI46_06665 0.41 +1.2 1,419,432 - IAI46_06665 0.47 +0.0 1,419,501 + IAI46_06665 0.60 -0.1 1,419,693 + +0.1 1,419,693 + +0.2 1,419,709 + +0.4 1,419,737 + -0.1 1,419,737 + -0.4 1,419,738 - +0.6 1,419,768 + +0.4 1,419,769 - -0.2 1,419,769 - +0.5 1,419,779 + +0.8 1,419,779 + +0.3 1,419,820 + +0.7 1,419,821 - +1.3 1,419,821 - +0.4 1,419,839 - +0.2 1,419,839 - -0.6 1,419,843 - +0.1 1,419,854 - IAI46_06670 0.11 -0.7 1,419,898 + IAI46_06670 0.19 -0.7 1,419,966 - IAI46_06670 0.31 +0.1 1,420,028 + IAI46_06670 0.43 -1.6 1,420,032 - IAI46_06670 0.43 -0.8 1,420,054 + IAI46_06670 0.47 -1.4 1,420,056 - IAI46_06670 0.48 +1.0 1,420,159 + IAI46_06670 0.67 -0.5 1,420,160 - IAI46_06670 0.67 -0.6 1,420,303 - -0.1 1,420,306 - +0.9 1,420,375 + +1.3 1,420,524 + -0.5 1,420,525 - -0.3 1,420,599 - -0.1 1,420,615 + +0.4 1,420,616 - -0.3 1,420,616 - +0.5 1,420,655 + IAI46_06675 0.10 +0.5 1,420,693 + IAI46_06675 0.12 +0.8 1,420,693 + IAI46_06675 0.12 -1.4 1,420,835 + IAI46_06675 0.17 -0.3 1,420,844 - IAI46_06675 0.18 +1.1 1,420,844 - IAI46_06675 0.18 +0.4 1,420,856 + IAI46_06675 0.18 +0.9 1,420,857 - IAI46_06675 0.18 +0.3 1,420,866 - IAI46_06675 0.19 -0.6 1,420,866 - IAI46_06675 0.19 -0.9 1,420,866 - IAI46_06675 0.19 +1.2 1,420,867 + IAI46_06675 0.19 -0.2 1,420,982 + IAI46_06675 0.23 -0.7 1,420,983 - IAI46_06675 0.23 -0.3 1,420,983 - IAI46_06675 0.23 -0.4 1,420,983 - IAI46_06675 0.23 -1.3 1,420,983 - IAI46_06675 0.23 +1.8 1,420,983 - IAI46_06675 0.23 +0.1 1,420,983 - IAI46_06675 0.23 +0.7 1,420,984 + IAI46_06675 0.23 +0.4 1,421,115 - IAI46_06675 0.28 -1.0 1,421,117 + IAI46_06675 0.28 +0.0 1,421,171 + IAI46_06675 0.31 +0.2 1,421,176 - IAI46_06675 0.31 -0.1 1,421,334 - IAI46_06675 0.37 +0.2 1,421,334 - IAI46_06675 0.37 +0.6
Or see this region's nucleotide sequence