Strain Fitness in Serratia liquefaciens MT49 around IAI46_03690

Experiment: Aluminum potassium sulfate dodecahydrate 1 mM, aerobic

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntIAI46_03685 and IAI46_03690 overlap by 1 nucleotidesIAI46_03690 and IAI46_03695 are separated by 70 nucleotidesIAI46_03695 and IAI46_03700 are separated by 61 nucleotides IAI46_03685: IAI46_03685 - NADPH-dependent assimilatory sulfite reductase flavoprotein subunit, at 803,110 to 804,909 _03685 IAI46_03690: IAI46_03690 - assimilatory sulfite reductase (NADPH) hemoprotein subunit, at 804,909 to 806,624 _03690 IAI46_03695: IAI46_03695 - phosphoadenylyl-sulfate reductase, at 806,695 to 807,429 _03695 IAI46_03700: IAI46_03700 - aminopeptidase, at 807,491 to 808,567 _03700 Position (kb) 804 805 806 807Strain fitness (log2 ratio) -2 -1 0 1 2at 804.054 kb on - strand, within IAI46_03685at 804.089 kb on + strand, within IAI46_03685at 804.090 kb on - strand, within IAI46_03685at 804.103 kb on + strand, within IAI46_03685at 804.390 kb on + strand, within IAI46_03685at 804.391 kb on - strand, within IAI46_03685at 804.432 kb on + strand, within IAI46_03685at 804.432 kb on + strand, within IAI46_03685at 804.433 kb on - strand, within IAI46_03685at 804.519 kb on + strand, within IAI46_03685at 804.586 kb on - strand, within IAI46_03685at 804.622 kb on + strand, within IAI46_03685at 804.623 kb on - strand, within IAI46_03685at 804.682 kb on - strand, within IAI46_03685at 804.688 kb on + strand, within IAI46_03685at 804.689 kb on - strand, within IAI46_03685at 804.689 kb on - strand, within IAI46_03685at 804.757 kb on + strandat 804.757 kb on + strandat 804.806 kb on + strandat 804.806 kb on + strandat 804.864 kb on - strandat 804.904 kb on + strandat 804.904 kb on + strandat 805.040 kb on + strandat 805.081 kb on - strand, within IAI46_03690at 805.178 kb on + strand, within IAI46_03690at 805.178 kb on + strand, within IAI46_03690at 805.179 kb on - strand, within IAI46_03690at 805.208 kb on + strand, within IAI46_03690at 805.209 kb on - strand, within IAI46_03690at 805.234 kb on - strand, within IAI46_03690at 805.298 kb on + strand, within IAI46_03690at 805.419 kb on + strand, within IAI46_03690at 805.539 kb on + strand, within IAI46_03690at 805.708 kb on - strand, within IAI46_03690at 805.735 kb on - strand, within IAI46_03690at 805.737 kb on - strand, within IAI46_03690at 805.751 kb on + strand, within IAI46_03690at 805.752 kb on - strand, within IAI46_03690at 805.833 kb on + strand, within IAI46_03690at 805.834 kb on - strand, within IAI46_03690at 805.859 kb on + strand, within IAI46_03690at 805.859 kb on + strand, within IAI46_03690at 805.859 kb on + strand, within IAI46_03690at 805.956 kb on - strand, within IAI46_03690at 805.967 kb on + strand, within IAI46_03690at 806.301 kb on - strand, within IAI46_03690at 806.301 kb on - strand, within IAI46_03690at 806.412 kb on + strand, within IAI46_03690at 806.412 kb on + strand, within IAI46_03690at 806.414 kb on + strand, within IAI46_03690at 806.414 kb on + strand, within IAI46_03690at 806.415 kb on - strand, within IAI46_03690at 806.463 kb on + strandat 806.463 kb on + strandat 806.464 kb on - strandat 806.474 kb on + strandat 806.593 kb on + strandat 806.667 kb on - strandat 806.762 kb on + strandat 806.762 kb on + strandat 806.763 kb on - strandat 806.766 kb on + strandat 806.767 kb on - strandat 806.767 kb on - strandat 806.767 kb on - strandat 806.873 kb on + strand, within IAI46_03695at 806.873 kb on + strand, within IAI46_03695at 806.874 kb on - strand, within IAI46_03695at 806.936 kb on - strand, within IAI46_03695at 806.953 kb on + strand, within IAI46_03695at 806.953 kb on + strand, within IAI46_03695at 807.085 kb on + strand, within IAI46_03695at 807.086 kb on - strand, within IAI46_03695at 807.088 kb on - strand, within IAI46_03695at 807.200 kb on + strand, within IAI46_03695at 807.272 kb on - strand, within IAI46_03695at 807.295 kb on + strand, within IAI46_03695at 807.296 kb on - strand, within IAI46_03695at 807.296 kb on - strand, within IAI46_03695at 807.296 kb on - strand, within IAI46_03695at 807.319 kb on + strand, within IAI46_03695at 807.319 kb on + strand, within IAI46_03695at 807.319 kb on + strand, within IAI46_03695at 807.319 kb on + strand, within IAI46_03695at 807.320 kb on - strand, within IAI46_03695at 807.320 kb on - strand, within IAI46_03695at 807.320 kb on - strand, within IAI46_03695at 807.428 kb on - strandat 807.428 kb on - strandat 807.435 kb on + strandat 807.436 kb on - strandat 807.436 kb on - strandat 807.494 kb on - strandat 807.616 kb on - strand, within IAI46_03700

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Per-strain Table

Position Strand Gene LocusTag Fraction Aluminum potassium sulfate dodecahydrate 1 mM, aerobic
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804,054 - IAI46_03685 0.52 -1.1
804,089 + IAI46_03685 0.54 -0.1
804,090 - IAI46_03685 0.54 -0.6
804,103 + IAI46_03685 0.55 +0.6
804,390 + IAI46_03685 0.71 -0.2
804,391 - IAI46_03685 0.71 +0.7
804,432 + IAI46_03685 0.73 +0.5
804,432 + IAI46_03685 0.73 -0.4
804,433 - IAI46_03685 0.73 +0.4
804,519 + IAI46_03685 0.78 +0.2
804,586 - IAI46_03685 0.82 -0.1
804,622 + IAI46_03685 0.84 +0.4
804,623 - IAI46_03685 0.84 +0.1
804,682 - IAI46_03685 0.87 +0.0
804,688 + IAI46_03685 0.88 +0.5
804,689 - IAI46_03685 0.88 -2.0
804,689 - IAI46_03685 0.88 -2.0
804,757 + -1.1
804,757 + +0.4
804,806 + -0.1
804,806 + -0.3
804,864 - -0.0
804,904 + +0.1
804,904 + +1.0
805,040 + -0.2
805,081 - IAI46_03690 0.10 +0.0
805,178 + IAI46_03690 0.16 +0.4
805,178 + IAI46_03690 0.16 -2.0
805,179 - IAI46_03690 0.16 -1.6
805,208 + IAI46_03690 0.17 -0.4
805,209 - IAI46_03690 0.17 +0.7
805,234 - IAI46_03690 0.19 -0.2
805,298 + IAI46_03690 0.23 -0.1
805,419 + IAI46_03690 0.30 +1.1
805,539 + IAI46_03690 0.37 +1.2
805,708 - IAI46_03690 0.47 -0.5
805,735 - IAI46_03690 0.48 +0.9
805,737 - IAI46_03690 0.48 +0.0
805,751 + IAI46_03690 0.49 -0.4
805,752 - IAI46_03690 0.49 -0.7
805,833 + IAI46_03690 0.54 +0.4
805,834 - IAI46_03690 0.54 -0.6
805,859 + IAI46_03690 0.55 -0.7
805,859 + IAI46_03690 0.55 +0.2
805,859 + IAI46_03690 0.55 +0.9
805,956 - IAI46_03690 0.61 -0.5
805,967 + IAI46_03690 0.62 +0.5
806,301 - IAI46_03690 0.81 +0.3
806,301 - IAI46_03690 0.81 -0.0
806,412 + IAI46_03690 0.88 +0.3
806,412 + IAI46_03690 0.88 -0.5
806,414 + IAI46_03690 0.88 -0.6
806,414 + IAI46_03690 0.88 +0.3
806,415 - IAI46_03690 0.88 -0.7
806,463 + +0.8
806,463 + +0.7
806,464 - +1.2
806,474 + +0.8
806,593 + +1.2
806,667 - -1.1
806,762 + -0.9
806,762 + -0.3
806,763 - +0.4
806,766 + +0.7
806,767 - -0.3
806,767 - +0.8
806,767 - +0.1
806,873 + IAI46_03695 0.24 -1.8
806,873 + IAI46_03695 0.24 -0.3
806,874 - IAI46_03695 0.24 -0.3
806,936 - IAI46_03695 0.33 -1.5
806,953 + IAI46_03695 0.35 -0.7
806,953 + IAI46_03695 0.35 -2.0
807,085 + IAI46_03695 0.53 -0.6
807,086 - IAI46_03695 0.53 -0.8
807,088 - IAI46_03695 0.53 -0.4
807,200 + IAI46_03695 0.69 -0.4
807,272 - IAI46_03695 0.79 -1.7
807,295 + IAI46_03695 0.82 +0.2
807,296 - IAI46_03695 0.82 -0.7
807,296 - IAI46_03695 0.82 -1.5
807,296 - IAI46_03695 0.82 -1.5
807,319 + IAI46_03695 0.85 +2.5
807,319 + IAI46_03695 0.85 -1.3
807,319 + IAI46_03695 0.85 -0.2
807,319 + IAI46_03695 0.85 -0.6
807,320 - IAI46_03695 0.85 -1.0
807,320 - IAI46_03695 0.85 -2.6
807,320 - IAI46_03695 0.85 -0.9
807,428 - +0.4
807,428 - +1.0
807,435 + +0.7
807,436 - +0.5
807,436 - +0.6
807,494 - +0.9
807,616 - IAI46_03700 0.12 +0.7

Or see this region's nucleotide sequence