Experiment: Aluminum potassium sulfate dodecahydrate 1 mM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_02020 and IAI46_02025 overlap by 7 nucleotides IAI46_02025 and IAI46_02030 overlap by 14 nucleotides IAI46_02030 and IAI46_02035 are separated by 90 nucleotides IAI46_02035 and IAI46_02040 are separated by 63 nucleotides
IAI46_02020: IAI46_02020 - SCP2 domain-containing protein, at 433,480 to 434,001
_02020
IAI46_02025: IAI46_02025 - N-acetyltransferase, at 433,995 to 434,498
_02025
IAI46_02030: IAI46_02030 - GIY-YIG nuclease family protein, at 434,485 to 434,793
_02030
IAI46_02035: IAI46_02035 - putrescine-ornithine antiporter, at 434,884 to 436,200
_02035
IAI46_02040: IAI46_02040 - ornithine decarboxylase SpeF, at 436,264 to 438,426
_02040
Position (kb) 434
435
436
437 Strain fitness (log2 ratio) -2
-1
0
1
2 at 433.991 kb on + strand at 433.999 kb on + strand at 433.999 kb on + strand at 434.156 kb on - strand, within IAI46_02025 at 434.156 kb on - strand, within IAI46_02025 at 434.274 kb on + strand, within IAI46_02025 at 434.274 kb on + strand, within IAI46_02025 at 434.275 kb on - strand, within IAI46_02025 at 434.307 kb on + strand, within IAI46_02025 at 434.307 kb on + strand, within IAI46_02025 at 434.308 kb on - strand, within IAI46_02025 at 434.317 kb on + strand, within IAI46_02025 at 434.317 kb on + strand, within IAI46_02025 at 434.340 kb on + strand, within IAI46_02025 at 434.340 kb on + strand, within IAI46_02025 at 434.341 kb on - strand, within IAI46_02025 at 434.341 kb on - strand, within IAI46_02025 at 434.376 kb on + strand, within IAI46_02025 at 434.515 kb on + strand at 434.515 kb on + strand at 434.516 kb on - strand, within IAI46_02030 at 434.516 kb on - strand, within IAI46_02030 at 434.599 kb on + strand, within IAI46_02030 at 434.607 kb on + strand, within IAI46_02030 at 434.608 kb on - strand, within IAI46_02030 at 434.721 kb on + strand, within IAI46_02030 at 434.722 kb on - strand, within IAI46_02030 at 434.722 kb on - strand, within IAI46_02030 at 434.722 kb on - strand, within IAI46_02030 at 434.733 kb on - strand, within IAI46_02030 at 434.733 kb on - strand, within IAI46_02030 at 434.733 kb on - strand, within IAI46_02030 at 434.762 kb on + strand, within IAI46_02030 at 434.763 kb on - strand at 434.763 kb on - strand at 434.763 kb on - strand at 434.763 kb on - strand at 434.797 kb on + strand at 434.797 kb on + strand at 434.797 kb on + strand at 434.798 kb on - strand at 434.828 kb on + strand at 434.828 kb on + strand at 434.828 kb on + strand at 434.828 kb on + strand at 434.828 kb on + strand at 434.829 kb on - strand at 434.829 kb on - strand at 434.850 kb on + strand at 434.850 kb on + strand at 434.850 kb on + strand at 434.880 kb on - strand at 434.931 kb on - strand at 434.993 kb on + strand at 434.994 kb on - strand at 434.994 kb on - strand at 434.994 kb on - strand at 434.994 kb on - strand at 435.002 kb on + strand at 435.002 kb on + strand at 435.003 kb on - strand at 435.003 kb on - strand at 435.003 kb on - strand at 435.003 kb on - strand at 435.011 kb on + strand at 435.011 kb on + strand at 435.012 kb on - strand at 435.085 kb on - strand, within IAI46_02035 at 435.113 kb on + strand, within IAI46_02035 at 435.114 kb on - strand, within IAI46_02035 at 435.114 kb on - strand, within IAI46_02035 at 435.120 kb on + strand, within IAI46_02035 at 435.123 kb on + strand, within IAI46_02035 at 435.123 kb on + strand, within IAI46_02035 at 435.123 kb on + strand, within IAI46_02035 at 435.123 kb on + strand, within IAI46_02035 at 435.124 kb on - strand, within IAI46_02035 at 435.124 kb on - strand, within IAI46_02035 at 435.124 kb on - strand, within IAI46_02035 at 435.199 kb on + strand, within IAI46_02035 at 435.307 kb on + strand, within IAI46_02035 at 435.402 kb on + strand, within IAI46_02035 at 435.403 kb on - strand, within IAI46_02035 at 435.451 kb on - strand, within IAI46_02035 at 435.458 kb on - strand, within IAI46_02035 at 435.458 kb on - strand, within IAI46_02035 at 435.460 kb on + strand, within IAI46_02035 at 435.461 kb on - strand, within IAI46_02035 at 435.461 kb on - strand, within IAI46_02035 at 435.461 kb on - strand, within IAI46_02035 at 435.461 kb on - strand, within IAI46_02035 at 435.489 kb on + strand, within IAI46_02035 at 435.491 kb on + strand, within IAI46_02035 at 435.491 kb on + strand, within IAI46_02035 at 435.491 kb on + strand, within IAI46_02035 at 435.491 kb on + strand, within IAI46_02035 at 435.492 kb on - strand, within IAI46_02035 at 435.492 kb on - strand, within IAI46_02035 at 435.540 kb on + strand, within IAI46_02035 at 435.541 kb on - strand, within IAI46_02035 at 435.541 kb on - strand, within IAI46_02035 at 435.541 kb on - strand, within IAI46_02035 at 435.541 kb on - strand, within IAI46_02035 at 435.541 kb on - strand, within IAI46_02035 at 435.675 kb on - strand, within IAI46_02035 at 435.675 kb on - strand, within IAI46_02035 at 435.828 kb on + strand, within IAI46_02035 at 435.829 kb on - strand, within IAI46_02035 at 435.930 kb on - strand, within IAI46_02035 at 435.933 kb on + strand, within IAI46_02035 at 435.935 kb on + strand, within IAI46_02035 at 435.935 kb on + strand, within IAI46_02035 at 435.936 kb on - strand, within IAI46_02035 at 435.945 kb on + strand, within IAI46_02035 at 435.946 kb on - strand, within IAI46_02035 at 435.946 kb on - strand, within IAI46_02035 at 435.972 kb on - strand, within IAI46_02035 at 435.972 kb on - strand, within IAI46_02035 at 435.980 kb on + strand, within IAI46_02035 at 435.980 kb on + strand, within IAI46_02035 at 435.981 kb on - strand, within IAI46_02035 at 435.981 kb on - strand, within IAI46_02035 at 436.080 kb on + strand at 436.081 kb on - strand at 436.119 kb on + strand at 436.119 kb on + strand at 436.119 kb on + strand at 436.119 kb on + strand at 436.119 kb on + strand at 436.120 kb on - strand at 436.217 kb on - strand at 436.240 kb on - strand at 436.242 kb on + strand at 436.266 kb on - strand at 436.270 kb on - strand at 436.281 kb on - strand at 436.322 kb on + strand at 436.323 kb on - strand at 436.363 kb on - strand at 436.388 kb on + strand at 436.389 kb on - strand at 436.432 kb on + strand at 436.449 kb on - strand at 436.454 kb on - strand at 436.454 kb on - strand at 436.454 kb on - strand at 436.603 kb on - strand, within IAI46_02040 at 436.610 kb on + strand, within IAI46_02040 at 436.620 kb on - strand, within IAI46_02040 at 436.659 kb on - strand, within IAI46_02040 at 436.668 kb on - strand, within IAI46_02040 at 436.686 kb on + strand, within IAI46_02040 at 436.687 kb on - strand, within IAI46_02040 at 436.687 kb on - strand, within IAI46_02040 at 436.688 kb on + strand, within IAI46_02040 at 436.689 kb on - strand, within IAI46_02040 at 436.714 kb on + strand, within IAI46_02040 at 436.715 kb on - strand, within IAI46_02040 at 436.840 kb on + strand, within IAI46_02040 at 436.840 kb on + strand, within IAI46_02040 at 436.840 kb on + strand, within IAI46_02040 at 436.840 kb on + strand, within IAI46_02040 at 436.841 kb on - strand, within IAI46_02040 at 436.859 kb on + strand, within IAI46_02040 at 436.859 kb on + strand, within IAI46_02040 at 436.859 kb on + strand, within IAI46_02040 at 436.860 kb on - strand, within IAI46_02040 at 436.898 kb on + strand, within IAI46_02040 at 436.899 kb on - strand, within IAI46_02040 at 437.054 kb on + strand, within IAI46_02040 at 437.055 kb on - strand, within IAI46_02040 at 437.055 kb on - strand, within IAI46_02040 at 437.055 kb on - strand, within IAI46_02040 at 437.055 kb on - strand, within IAI46_02040 at 437.131 kb on - strand, within IAI46_02040
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum potassium sulfate dodecahydrate 1 mM, aerobic remove 433,991 + -0.1 433,999 + +0.9 433,999 + -1.1 434,156 - IAI46_02025 0.32 -1.8 434,156 - IAI46_02025 0.32 +0.7 434,274 + IAI46_02025 0.55 -0.7 434,274 + IAI46_02025 0.55 +1.2 434,275 - IAI46_02025 0.56 -0.5 434,307 + IAI46_02025 0.62 +0.1 434,307 + IAI46_02025 0.62 +0.4 434,308 - IAI46_02025 0.62 +0.4 434,317 + IAI46_02025 0.64 +0.3 434,317 + IAI46_02025 0.64 -0.3 434,340 + IAI46_02025 0.68 -0.9 434,340 + IAI46_02025 0.68 -0.7 434,341 - IAI46_02025 0.69 -0.4 434,341 - IAI46_02025 0.69 -1.8 434,376 + IAI46_02025 0.76 +0.5 434,515 + -0.3 434,515 + +0.2 434,516 - IAI46_02030 0.10 +1.6 434,516 - IAI46_02030 0.10 +1.1 434,599 + IAI46_02030 0.37 +1.2 434,607 + IAI46_02030 0.39 -0.7 434,608 - IAI46_02030 0.40 +0.1 434,721 + IAI46_02030 0.76 -0.1 434,722 - IAI46_02030 0.77 -1.6 434,722 - IAI46_02030 0.77 -0.1 434,722 - IAI46_02030 0.77 -2.0 434,733 - IAI46_02030 0.80 +0.6 434,733 - IAI46_02030 0.80 -0.1 434,733 - IAI46_02030 0.80 -0.7 434,762 + IAI46_02030 0.90 +0.7 434,763 - -0.6 434,763 - +0.5 434,763 - +0.8 434,763 - +0.3 434,797 + -0.6 434,797 + -0.2 434,797 + -0.8 434,798 - -0.1 434,828 + -0.7 434,828 + +0.7 434,828 + +1.3 434,828 + -0.4 434,828 + +1.2 434,829 - -0.5 434,829 - -0.1 434,850 + -0.3 434,850 + -0.2 434,850 + -1.3 434,880 - +0.3 434,931 - +0.6 434,993 + +0.5 434,994 - -0.5 434,994 - -0.0 434,994 - +1.3 434,994 - +0.4 435,002 + -0.3 435,002 + +0.9 435,003 - +0.6 435,003 - +0.3 435,003 - +0.1 435,003 - -0.3 435,011 + +1.0 435,011 + -0.1 435,012 - +1.6 435,085 - IAI46_02035 0.15 +0.3 435,113 + IAI46_02035 0.17 +0.0 435,114 - IAI46_02035 0.17 +1.0 435,114 - IAI46_02035 0.17 -0.7 435,120 + IAI46_02035 0.18 +1.0 435,123 + IAI46_02035 0.18 -0.3 435,123 + IAI46_02035 0.18 +0.5 435,123 + IAI46_02035 0.18 +0.1 435,123 + IAI46_02035 0.18 +0.3 435,124 - IAI46_02035 0.18 -0.6 435,124 - IAI46_02035 0.18 -0.1 435,124 - IAI46_02035 0.18 -0.2 435,199 + IAI46_02035 0.24 -0.9 435,307 + IAI46_02035 0.32 +1.0 435,402 + IAI46_02035 0.39 +0.4 435,403 - IAI46_02035 0.39 +0.5 435,451 - IAI46_02035 0.43 -0.2 435,458 - IAI46_02035 0.44 -1.4 435,458 - IAI46_02035 0.44 +0.0 435,460 + IAI46_02035 0.44 -1.2 435,461 - IAI46_02035 0.44 +0.1 435,461 - IAI46_02035 0.44 -0.3 435,461 - IAI46_02035 0.44 -0.3 435,461 - IAI46_02035 0.44 -0.8 435,489 + IAI46_02035 0.46 -0.3 435,491 + IAI46_02035 0.46 +0.1 435,491 + IAI46_02035 0.46 -0.2 435,491 + IAI46_02035 0.46 +0.2 435,491 + IAI46_02035 0.46 -0.4 435,492 - IAI46_02035 0.46 +0.1 435,492 - IAI46_02035 0.46 +0.1 435,540 + IAI46_02035 0.50 +1.0 435,541 - IAI46_02035 0.50 +0.1 435,541 - IAI46_02035 0.50 -0.3 435,541 - IAI46_02035 0.50 +0.4 435,541 - IAI46_02035 0.50 +0.0 435,541 - IAI46_02035 0.50 +0.7 435,675 - IAI46_02035 0.60 -0.1 435,675 - IAI46_02035 0.60 +0.8 435,828 + IAI46_02035 0.72 +1.5 435,829 - IAI46_02035 0.72 +0.2 435,930 - IAI46_02035 0.79 +0.6 435,933 + IAI46_02035 0.80 -0.3 435,935 + IAI46_02035 0.80 -1.9 435,935 + IAI46_02035 0.80 -0.3 435,936 - IAI46_02035 0.80 +0.3 435,945 + IAI46_02035 0.81 -0.1 435,946 - IAI46_02035 0.81 +0.3 435,946 - IAI46_02035 0.81 -0.3 435,972 - IAI46_02035 0.83 +0.2 435,972 - IAI46_02035 0.83 +0.2 435,980 + IAI46_02035 0.83 +0.2 435,980 + IAI46_02035 0.83 -0.4 435,981 - IAI46_02035 0.83 +0.1 435,981 - IAI46_02035 0.83 +0.1 436,080 + -1.0 436,081 - -0.2 436,119 + +0.8 436,119 + -1.1 436,119 + +0.2 436,119 + -0.2 436,119 + -1.0 436,120 - +0.6 436,217 - +1.0 436,240 - -0.0 436,242 + +0.5 436,266 - -0.2 436,270 - +0.2 436,281 - -0.5 436,322 + -0.3 436,323 - -0.0 436,363 - +0.1 436,388 + -0.1 436,389 - -0.3 436,432 + -0.5 436,449 - +0.2 436,454 - -0.1 436,454 - -0.2 436,454 - +2.1 436,603 - IAI46_02040 0.16 +0.8 436,610 + IAI46_02040 0.16 -0.3 436,620 - IAI46_02040 0.16 -0.0 436,659 - IAI46_02040 0.18 +0.3 436,668 - IAI46_02040 0.19 +0.9 436,686 + IAI46_02040 0.20 -0.4 436,687 - IAI46_02040 0.20 +0.4 436,687 - IAI46_02040 0.20 -0.4 436,688 + IAI46_02040 0.20 +0.3 436,689 - IAI46_02040 0.20 +0.4 436,714 + IAI46_02040 0.21 +0.3 436,715 - IAI46_02040 0.21 +0.9 436,840 + IAI46_02040 0.27 +0.1 436,840 + IAI46_02040 0.27 +0.5 436,840 + IAI46_02040 0.27 +0.9 436,840 + IAI46_02040 0.27 +0.2 436,841 - IAI46_02040 0.27 +0.4 436,859 + IAI46_02040 0.28 +0.6 436,859 + IAI46_02040 0.28 +1.0 436,859 + IAI46_02040 0.28 +2.0 436,860 - IAI46_02040 0.28 -0.4 436,898 + IAI46_02040 0.29 +0.1 436,899 - IAI46_02040 0.29 -0.5 437,054 + IAI46_02040 0.37 +1.0 437,055 - IAI46_02040 0.37 +1.1 437,055 - IAI46_02040 0.37 +0.6 437,055 - IAI46_02040 0.37 +0.7 437,055 - IAI46_02040 0.37 -0.2 437,131 - IAI46_02040 0.40 -1.6
Or see this region's nucleotide sequence