Experiment: Aluminum potassium sulfate dodecahydrate 1 mM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_20450 and IAI46_20455 are separated by 12 nucleotides IAI46_20455 and IAI46_20460 are separated by 696 nucleotides
IAI46_20450: IAI46_20450 - phosphoenolpyruvate--protein phosphotransferase, at 4,324,733 to 4,326,979
_20450
IAI46_20455: IAI46_20455 - RNA pyrophosphohydrolase, at 4,326,992 to 4,327,519
_20455
IAI46_20460: IAI46_20460 - DNA mismatch repair endonuclease MutH, at 4,328,216 to 4,328,902
_20460
Position (kb) 4326
4327
4328 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 4326.062 kb on + strand, within IAI46_20450 at 4326.111 kb on + strand, within IAI46_20450 at 4326.111 kb on + strand, within IAI46_20450 at 4326.112 kb on - strand, within IAI46_20450 at 4326.112 kb on - strand, within IAI46_20450 at 4326.112 kb on - strand, within IAI46_20450 at 4326.246 kb on + strand, within IAI46_20450 at 4326.247 kb on - strand, within IAI46_20450 at 4326.247 kb on - strand, within IAI46_20450 at 4326.412 kb on + strand, within IAI46_20450 at 4326.685 kb on + strand, within IAI46_20450 at 4326.687 kb on + strand, within IAI46_20450 at 4326.687 kb on + strand, within IAI46_20450 at 4326.829 kb on - strand at 4326.829 kb on - strand at 4326.831 kb on + strand at 4326.832 kb on - strand at 4326.858 kb on + strand at 4326.858 kb on + strand at 4326.858 kb on + strand at 4326.859 kb on - strand at 4326.859 kb on - strand at 4326.859 kb on - strand at 4326.979 kb on + strand at 4326.980 kb on - strand at 4326.980 kb on - strand at 4326.980 kb on - strand at 4326.980 kb on - strand at 4326.980 kb on - strand at 4326.980 kb on - strand at 4326.993 kb on + strand at 4326.993 kb on + strand at 4326.994 kb on - strand at 4327.183 kb on + strand, within IAI46_20455 at 4327.183 kb on + strand, within IAI46_20455 at 4327.184 kb on - strand, within IAI46_20455 at 4327.244 kb on - strand, within IAI46_20455 at 4327.291 kb on - strand, within IAI46_20455 at 4327.368 kb on + strand, within IAI46_20455 at 4327.540 kb on - strand at 4327.540 kb on - strand at 4327.844 kb on + strand at 4327.911 kb on + strand at 4327.966 kb on + strand at 4327.966 kb on + strand at 4327.967 kb on - strand at 4328.022 kb on + strand at 4328.028 kb on + strand at 4328.028 kb on + strand at 4328.029 kb on - strand at 4328.029 kb on - strand at 4328.029 kb on - strand at 4328.040 kb on + strand at 4328.095 kb on + strand at 4328.172 kb on - strand at 4328.333 kb on - strand, within IAI46_20460 at 4328.356 kb on + strand, within IAI46_20460 at 4328.356 kb on + strand, within IAI46_20460 at 4328.356 kb on + strand, within IAI46_20460
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum potassium sulfate dodecahydrate 1 mM, aerobic remove 4,326,062 + IAI46_20450 0.59 -0.2 4,326,111 + IAI46_20450 0.61 -0.9 4,326,111 + IAI46_20450 0.61 -0.2 4,326,112 - IAI46_20450 0.61 -0.4 4,326,112 - IAI46_20450 0.61 +0.6 4,326,112 - IAI46_20450 0.61 -0.1 4,326,246 + IAI46_20450 0.67 +0.1 4,326,247 - IAI46_20450 0.67 +0.5 4,326,247 - IAI46_20450 0.67 -0.9 4,326,412 + IAI46_20450 0.75 +0.3 4,326,685 + IAI46_20450 0.87 -0.2 4,326,687 + IAI46_20450 0.87 -1.3 4,326,687 + IAI46_20450 0.87 +0.5 4,326,829 - -0.0 4,326,829 - -1.6 4,326,831 + +0.6 4,326,832 - -1.1 4,326,858 + +0.0 4,326,858 + +0.3 4,326,858 + -0.2 4,326,859 - -0.5 4,326,859 - +0.9 4,326,859 - -0.6 4,326,979 + -0.1 4,326,980 - -0.1 4,326,980 - +0.5 4,326,980 - +0.1 4,326,980 - -1.5 4,326,980 - -0.1 4,326,980 - +0.7 4,326,993 + +0.5 4,326,993 + -0.5 4,326,994 - +0.4 4,327,183 + IAI46_20455 0.36 +0.1 4,327,183 + IAI46_20455 0.36 +0.4 4,327,184 - IAI46_20455 0.36 -0.6 4,327,244 - IAI46_20455 0.48 +0.2 4,327,291 - IAI46_20455 0.57 +1.2 4,327,368 + IAI46_20455 0.71 -0.3 4,327,540 - -0.0 4,327,540 - +0.4 4,327,844 + -2.0 4,327,911 + +0.7 4,327,966 + -0.9 4,327,966 + -0.4 4,327,967 - +0.8 4,328,022 + +0.5 4,328,028 + +0.7 4,328,028 + +0.5 4,328,029 - -2.2 4,328,029 - +0.4 4,328,029 - +0.8 4,328,040 + +0.5 4,328,095 + -0.3 4,328,172 - +0.6 4,328,333 - IAI46_20460 0.17 -0.3 4,328,356 + IAI46_20460 0.20 -0.6 4,328,356 + IAI46_20460 0.20 -0.7 4,328,356 + IAI46_20460 0.20 +2.8
Or see this region's nucleotide sequence