Experiment: Aluminum potassium sulfate dodecahydrate 1 mM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_18470 and IAI46_18475 are separated by 5 nucleotides IAI46_18475 and IAI46_18480 are separated by 174 nucleotides IAI46_18480 and IAI46_18485 are separated by 2 nucleotides
IAI46_18470: IAI46_18470 - HAMP domain-containing protein, at 3,888,212 to 3,889,528
_18470
IAI46_18475: IAI46_18475 - response regulator transcription factor, at 3,889,534 to 3,890,214
_18475
IAI46_18480: IAI46_18480 - efflux RND transporter periplasmic adaptor subunit, at 3,890,389 to 3,891,582
_18480
IAI46_18485: IAI46_18485 - MacB family efflux pump subunit, at 3,891,585 to 3,893,537
_18485
Position (kb)
3890
3891
3892 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3889.425 kb on + strand at 3889.437 kb on + strand at 3889.438 kb on - strand at 3889.440 kb on - strand at 3889.478 kb on - strand at 3889.478 kb on - strand at 3889.515 kb on - strand at 3889.614 kb on + strand, within IAI46_18475 at 3889.646 kb on + strand, within IAI46_18475 at 3889.647 kb on - strand, within IAI46_18475 at 3889.768 kb on - strand, within IAI46_18475 at 3889.908 kb on - strand, within IAI46_18475 at 3889.926 kb on - strand, within IAI46_18475 at 3890.252 kb on + strand at 3890.253 kb on - strand at 3890.289 kb on - strand at 3890.289 kb on - strand at 3890.292 kb on + strand at 3890.293 kb on - strand at 3890.293 kb on - strand at 3890.293 kb on - strand at 3890.309 kb on + strand at 3890.310 kb on - strand at 3890.368 kb on - strand at 3890.433 kb on + strand at 3890.433 kb on + strand at 3890.433 kb on + strand at 3890.433 kb on + strand at 3890.433 kb on + strand at 3890.434 kb on - strand at 3890.445 kb on + strand at 3890.497 kb on + strand at 3890.497 kb on + strand at 3890.497 kb on + strand at 3890.498 kb on - strand at 3890.498 kb on - strand at 3890.499 kb on + strand at 3890.499 kb on + strand at 3890.500 kb on - strand at 3890.500 kb on - strand at 3890.500 kb on - strand at 3890.500 kb on - strand at 3890.500 kb on - strand at 3890.500 kb on - strand at 3890.558 kb on + strand, within IAI46_18480 at 3890.559 kb on - strand, within IAI46_18480 at 3890.617 kb on + strand, within IAI46_18480 at 3890.618 kb on - strand, within IAI46_18480 at 3890.675 kb on + strand, within IAI46_18480 at 3890.675 kb on + strand, within IAI46_18480 at 3890.676 kb on - strand, within IAI46_18480 at 3890.777 kb on - strand, within IAI46_18480 at 3890.777 kb on - strand, within IAI46_18480 at 3890.938 kb on + strand, within IAI46_18480 at 3891.154 kb on + strand, within IAI46_18480 at 3891.154 kb on + strand, within IAI46_18480 at 3891.156 kb on + strand, within IAI46_18480 at 3891.156 kb on + strand, within IAI46_18480 at 3891.156 kb on + strand, within IAI46_18480 at 3891.156 kb on + strand, within IAI46_18480 at 3891.156 kb on + strand, within IAI46_18480 at 3891.157 kb on - strand, within IAI46_18480 at 3891.176 kb on + strand, within IAI46_18480 at 3891.234 kb on + strand, within IAI46_18480 at 3891.235 kb on - strand, within IAI46_18480 at 3891.268 kb on + strand, within IAI46_18480 at 3891.269 kb on - strand, within IAI46_18480 at 3891.269 kb on - strand, within IAI46_18480 at 3891.334 kb on + strand, within IAI46_18480 at 3891.334 kb on + strand, within IAI46_18480 at 3891.334 kb on + strand, within IAI46_18480 at 3891.334 kb on + strand, within IAI46_18480 at 3891.334 kb on + strand, within IAI46_18480 at 3891.334 kb on + strand, within IAI46_18480 at 3891.334 kb on + strand, within IAI46_18480 at 3891.335 kb on - strand, within IAI46_18480 at 3891.335 kb on - strand, within IAI46_18480 at 3891.335 kb on - strand, within IAI46_18480 at 3891.335 kb on - strand, within IAI46_18480 at 3891.335 kb on - strand, within IAI46_18480 at 3891.335 kb on - strand, within IAI46_18480 at 3891.337 kb on - strand, within IAI46_18480 at 3891.427 kb on - strand, within IAI46_18480 at 3891.459 kb on + strand, within IAI46_18480 at 3891.481 kb on - strand at 3891.874 kb on - strand, within IAI46_18485 at 3891.881 kb on - strand, within IAI46_18485 at 3891.927 kb on + strand, within IAI46_18485 at 3891.927 kb on + strand, within IAI46_18485 at 3891.927 kb on + strand, within IAI46_18485 at 3891.928 kb on - strand, within IAI46_18485 at 3891.928 kb on - strand, within IAI46_18485 at 3892.008 kb on + strand, within IAI46_18485 at 3892.052 kb on + strand, within IAI46_18485 at 3892.053 kb on - strand, within IAI46_18485 at 3892.175 kb on + strand, within IAI46_18485 at 3892.200 kb on - strand, within IAI46_18485 at 3892.238 kb on + strand, within IAI46_18485 at 3892.239 kb on - strand, within IAI46_18485 at 3892.239 kb on - strand, within IAI46_18485 at 3892.239 kb on - strand, within IAI46_18485 at 3892.353 kb on + strand, within IAI46_18485 at 3892.427 kb on + strand, within IAI46_18485 at 3892.556 kb on + strand, within IAI46_18485 at 3892.573 kb on + strand, within IAI46_18485 at 3892.574 kb on - strand, within IAI46_18485 at 3892.574 kb on - strand, within IAI46_18485
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum potassium sulfate dodecahydrate 1 mM, aerobic remove 3,889,425 + +1.6 3,889,437 + -0.1 3,889,438 - -0.5 3,889,440 - +0.4 3,889,478 - -0.4 3,889,478 - -0.4 3,889,515 - +1.4 3,889,614 + IAI46_18475 0.12 +0.6 3,889,646 + IAI46_18475 0.16 +0.3 3,889,647 - IAI46_18475 0.17 -0.5 3,889,768 - IAI46_18475 0.34 +0.1 3,889,908 - IAI46_18475 0.55 -1.9 3,889,926 - IAI46_18475 0.58 +0.6 3,890,252 + +0.1 3,890,253 - +0.4 3,890,289 - +0.2 3,890,289 - +0.4 3,890,292 + +0.1 3,890,293 - -0.7 3,890,293 - +0.3 3,890,293 - +1.4 3,890,309 + -0.2 3,890,310 - -1.2 3,890,368 - -0.5 3,890,433 + +1.2 3,890,433 + -0.6 3,890,433 + -0.9 3,890,433 + -0.8 3,890,433 + +1.9 3,890,434 - +0.7 3,890,445 + -0.2 3,890,497 + -0.1 3,890,497 + +0.9 3,890,497 + +0.9 3,890,498 - +0.9 3,890,498 - +0.6 3,890,499 + -0.7 3,890,499 + +1.1 3,890,500 - -0.9 3,890,500 - +0.2 3,890,500 - -0.2 3,890,500 - +0.7 3,890,500 - +0.2 3,890,500 - -0.5 3,890,558 + IAI46_18480 0.14 +1.1 3,890,559 - IAI46_18480 0.14 -0.0 3,890,617 + IAI46_18480 0.19 +1.3 3,890,618 - IAI46_18480 0.19 +0.7 3,890,675 + IAI46_18480 0.24 -0.1 3,890,675 + IAI46_18480 0.24 -0.4 3,890,676 - IAI46_18480 0.24 -0.2 3,890,777 - IAI46_18480 0.32 -0.5 3,890,777 - IAI46_18480 0.32 +0.4 3,890,938 + IAI46_18480 0.46 +0.1 3,891,154 + IAI46_18480 0.64 +0.2 3,891,154 + IAI46_18480 0.64 -0.3 3,891,156 + IAI46_18480 0.64 +2.1 3,891,156 + IAI46_18480 0.64 -0.4 3,891,156 + IAI46_18480 0.64 -0.2 3,891,156 + IAI46_18480 0.64 -1.2 3,891,156 + IAI46_18480 0.64 +0.7 3,891,157 - IAI46_18480 0.64 +1.7 3,891,176 + IAI46_18480 0.66 +1.5 3,891,234 + IAI46_18480 0.71 +0.6 3,891,235 - IAI46_18480 0.71 +0.5 3,891,268 + IAI46_18480 0.74 +0.2 3,891,269 - IAI46_18480 0.74 -0.7 3,891,269 - IAI46_18480 0.74 +0.5 3,891,334 + IAI46_18480 0.79 +0.2 3,891,334 + IAI46_18480 0.79 -0.1 3,891,334 + IAI46_18480 0.79 -0.1 3,891,334 + IAI46_18480 0.79 +0.3 3,891,334 + IAI46_18480 0.79 -0.2 3,891,334 + IAI46_18480 0.79 -0.5 3,891,334 + IAI46_18480 0.79 +0.2 3,891,335 - IAI46_18480 0.79 -0.0 3,891,335 - IAI46_18480 0.79 -0.2 3,891,335 - IAI46_18480 0.79 +0.7 3,891,335 - IAI46_18480 0.79 -0.9 3,891,335 - IAI46_18480 0.79 +0.7 3,891,335 - IAI46_18480 0.79 -0.4 3,891,337 - IAI46_18480 0.79 -0.2 3,891,427 - IAI46_18480 0.87 -1.5 3,891,459 + IAI46_18480 0.90 -0.3 3,891,481 - +0.2 3,891,874 - IAI46_18485 0.15 +1.8 3,891,881 - IAI46_18485 0.15 +0.6 3,891,927 + IAI46_18485 0.18 -0.9 3,891,927 + IAI46_18485 0.18 -0.4 3,891,927 + IAI46_18485 0.18 +0.8 3,891,928 - IAI46_18485 0.18 -0.9 3,891,928 - IAI46_18485 0.18 +1.4 3,892,008 + IAI46_18485 0.22 -0.2 3,892,052 + IAI46_18485 0.24 +1.1 3,892,053 - IAI46_18485 0.24 +0.2 3,892,175 + IAI46_18485 0.30 -0.8 3,892,200 - IAI46_18485 0.31 +1.3 3,892,238 + IAI46_18485 0.33 -0.2 3,892,239 - IAI46_18485 0.33 +0.5 3,892,239 - IAI46_18485 0.33 +0.4 3,892,239 - IAI46_18485 0.33 +0.4 3,892,353 + IAI46_18485 0.39 +0.1 3,892,427 + IAI46_18485 0.43 +0.6 3,892,556 + IAI46_18485 0.50 +1.1 3,892,573 + IAI46_18485 0.51 +0.5 3,892,574 - IAI46_18485 0.51 +0.5 3,892,574 - IAI46_18485 0.51 -0.7
Or see this region's nucleotide sequence