Experiment: Aluminum potassium sulfate dodecahydrate 1 mM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_16155 and IAI46_16160 are separated by 9 nucleotides IAI46_16160 and IAI46_16165 overlap by 23 nucleotides IAI46_16165 and IAI46_16170 are separated by 13 nucleotides IAI46_16170 and IAI46_16175 are separated by 5 nucleotides
IAI46_16155: IAI46_16155 - 3-oxoacid CoA-transferase subunit A, at 3,388,069 to 3,388,755
_16155
IAI46_16160: IAI46_16160 - CoA transferase subunit B, at 3,388,765 to 3,389,445
_16160
IAI46_16165: IAI46_16165 - 3-oxoadipyl-CoA thiolase, at 3,389,423 to 3,390,625
_16165
IAI46_16170: IAI46_16170 - 3-oxoadipate enol-lactonase, at 3,390,639 to 3,391,409
_16170
IAI46_16175: IAI46_16175 - glutaredoxin-dependent arsenate reductase, at 3,391,415 to 3,391,846
_16175
Position (kb)
3389
3390
3391 Strain fitness (log2 ratio)
-1
0
1
2 at 3388.430 kb on - strand, within IAI46_16155 at 3388.498 kb on + strand, within IAI46_16155 at 3388.498 kb on + strand, within IAI46_16155 at 3388.499 kb on - strand, within IAI46_16155 at 3388.577 kb on - strand, within IAI46_16155 at 3388.578 kb on + strand, within IAI46_16155 at 3388.645 kb on - strand, within IAI46_16155 at 3388.690 kb on - strand at 3388.690 kb on - strand at 3388.706 kb on + strand at 3388.754 kb on - strand at 3388.754 kb on - strand at 3388.777 kb on - strand at 3388.777 kb on - strand at 3388.870 kb on + strand, within IAI46_16160 at 3388.871 kb on - strand, within IAI46_16160 at 3388.871 kb on - strand, within IAI46_16160 at 3389.080 kb on + strand, within IAI46_16160 at 3389.080 kb on + strand, within IAI46_16160 at 3389.249 kb on - strand, within IAI46_16160 at 3389.435 kb on + strand at 3389.435 kb on + strand at 3390.385 kb on + strand, within IAI46_16165 at 3390.567 kb on + strand at 3390.567 kb on + strand at 3390.580 kb on + strand at 3390.773 kb on + strand, within IAI46_16170 at 3390.773 kb on + strand, within IAI46_16170 at 3390.774 kb on - strand, within IAI46_16170 at 3390.774 kb on - strand, within IAI46_16170 at 3390.807 kb on - strand, within IAI46_16170 at 3390.872 kb on - strand, within IAI46_16170 at 3391.155 kb on + strand, within IAI46_16170 at 3391.561 kb on + strand, within IAI46_16175 at 3391.562 kb on - strand, within IAI46_16175 at 3391.562 kb on - strand, within IAI46_16175 at 3391.562 kb on - strand, within IAI46_16175 at 3391.571 kb on - strand, within IAI46_16175 at 3391.595 kb on - strand, within IAI46_16175 at 3391.595 kb on - strand, within IAI46_16175
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum potassium sulfate dodecahydrate 1 mM, aerobic remove 3,388,430 - IAI46_16155 0.53 +1.7 3,388,498 + IAI46_16155 0.62 -0.7 3,388,498 + IAI46_16155 0.62 +0.1 3,388,499 - IAI46_16155 0.63 +0.4 3,388,577 - IAI46_16155 0.74 +1.3 3,388,578 + IAI46_16155 0.74 +0.2 3,388,645 - IAI46_16155 0.84 +1.1 3,388,690 - -0.2 3,388,690 - -0.0 3,388,706 + -0.7 3,388,754 - -0.0 3,388,754 - +0.7 3,388,777 - -0.0 3,388,777 - -0.2 3,388,870 + IAI46_16160 0.15 -0.1 3,388,871 - IAI46_16160 0.16 -0.9 3,388,871 - IAI46_16160 0.16 +0.2 3,389,080 + IAI46_16160 0.46 +0.2 3,389,080 + IAI46_16160 0.46 -0.2 3,389,249 - IAI46_16160 0.71 -0.8 3,389,435 + -0.5 3,389,435 + +1.3 3,390,385 + IAI46_16165 0.80 -0.3 3,390,567 + -0.7 3,390,567 + +1.2 3,390,580 + -0.3 3,390,773 + IAI46_16170 0.17 -0.6 3,390,773 + IAI46_16170 0.17 +1.9 3,390,774 - IAI46_16170 0.18 +0.4 3,390,774 - IAI46_16170 0.18 +0.0 3,390,807 - IAI46_16170 0.22 +0.7 3,390,872 - IAI46_16170 0.30 +1.1 3,391,155 + IAI46_16170 0.67 +0.4 3,391,561 + IAI46_16175 0.34 +0.1 3,391,562 - IAI46_16175 0.34 -1.1 3,391,562 - IAI46_16175 0.34 +0.9 3,391,562 - IAI46_16175 0.34 -0.5 3,391,571 - IAI46_16175 0.36 +0.5 3,391,595 - IAI46_16175 0.42 -0.7 3,391,595 - IAI46_16175 0.42 -0.4
Or see this region's nucleotide sequence