Experiment: Aluminum potassium sulfate dodecahydrate 1 mM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_13505 and IAI46_13510 are separated by 193 nucleotides IAI46_13510 and IAI46_13515 are separated by 12 nucleotides IAI46_13515 and IAI46_13520 overlap by 11 nucleotides
IAI46_13505: IAI46_13505 - phage shock protein operon transcriptional activator, at 2,883,633 to 2,884,640
_13505
IAI46_13510: IAI46_13510 - GTP-binding protein, at 2,884,834 to 2,886,021
_13510
IAI46_13515: IAI46_13515 - carbonate dehydratase, at 2,886,034 to 2,886,594
_13515
IAI46_13520: IAI46_13520 - GTP cyclohydrolase I FolE2, at 2,886,584 to 2,887,513
_13520
Position (kb)
2884
2885
2886
2887 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2884.277 kb on + strand, within IAI46_13505 at 2884.277 kb on + strand, within IAI46_13505 at 2884.310 kb on - strand, within IAI46_13505 at 2884.544 kb on + strand at 2884.544 kb on + strand at 2884.835 kb on + strand at 2884.872 kb on - strand at 2884.931 kb on - strand at 2885.046 kb on + strand, within IAI46_13510 at 2885.047 kb on - strand, within IAI46_13510 at 2885.057 kb on - strand, within IAI46_13510 at 2885.087 kb on + strand, within IAI46_13510 at 2885.088 kb on - strand, within IAI46_13510 at 2885.170 kb on + strand, within IAI46_13510 at 2885.170 kb on + strand, within IAI46_13510 at 2885.171 kb on - strand, within IAI46_13510 at 2885.171 kb on - strand, within IAI46_13510 at 2885.208 kb on - strand, within IAI46_13510 at 2885.296 kb on + strand, within IAI46_13510 at 2885.297 kb on - strand, within IAI46_13510 at 2885.480 kb on - strand, within IAI46_13510 at 2885.741 kb on + strand, within IAI46_13510 at 2885.952 kb on + strand at 2886.182 kb on + strand, within IAI46_13515 at 2886.183 kb on - strand, within IAI46_13515 at 2886.435 kb on + strand, within IAI46_13515 at 2886.488 kb on + strand, within IAI46_13515 at 2886.586 kb on - strand at 2886.586 kb on - strand at 2886.827 kb on - strand, within IAI46_13520 at 2886.899 kb on - strand, within IAI46_13520 at 2886.925 kb on + strand, within IAI46_13520
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum potassium sulfate dodecahydrate 1 mM, aerobic remove 2,884,277 + IAI46_13505 0.64 -0.0 2,884,277 + IAI46_13505 0.64 -0.1 2,884,310 - IAI46_13505 0.67 +0.1 2,884,544 + +0.7 2,884,544 + +0.9 2,884,835 + +1.2 2,884,872 - -0.2 2,884,931 - +0.1 2,885,046 + IAI46_13510 0.18 +0.6 2,885,047 - IAI46_13510 0.18 +0.1 2,885,057 - IAI46_13510 0.19 -0.3 2,885,087 + IAI46_13510 0.21 -1.0 2,885,088 - IAI46_13510 0.21 +1.1 2,885,170 + IAI46_13510 0.28 -0.9 2,885,170 + IAI46_13510 0.28 -0.1 2,885,171 - IAI46_13510 0.28 +0.9 2,885,171 - IAI46_13510 0.28 +1.1 2,885,208 - IAI46_13510 0.31 +0.0 2,885,296 + IAI46_13510 0.39 -0.2 2,885,297 - IAI46_13510 0.39 -0.6 2,885,480 - IAI46_13510 0.54 -0.0 2,885,741 + IAI46_13510 0.76 +0.1 2,885,952 + -3.6 2,886,182 + IAI46_13515 0.26 -1.3 2,886,183 - IAI46_13515 0.27 -0.8 2,886,435 + IAI46_13515 0.71 -0.6 2,886,488 + IAI46_13515 0.81 -0.1 2,886,586 - -0.9 2,886,586 - -0.1 2,886,827 - IAI46_13520 0.26 +0.0 2,886,899 - IAI46_13520 0.34 +1.2 2,886,925 + IAI46_13520 0.37 -1.0
Or see this region's nucleotide sequence