Experiment: Aluminum potassium sulfate dodecahydrate 1 mM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_12980 and IAI46_12985 are separated by 45 nucleotides IAI46_12985 and IAI46_12990 are separated by 13 nucleotides IAI46_12990 and IAI46_12995 are separated by 26 nucleotides IAI46_12995 and IAI46_13000 are separated by 110 nucleotides IAI46_13000 and IAI46_13005 are separated by 142 nucleotides
IAI46_12980: IAI46_12980 - ABC-F family ATP-binding cassette domain-containing protein, at 2,768,430 to 2,770,157
_12980
IAI46_12985: IAI46_12985 - GNAT family N-acetyltransferase, at 2,770,203 to 2,770,655
_12985
IAI46_12990: IAI46_12990 - cation diffusion facilitator family transporter, at 2,770,669 to 2,772,051
_12990
IAI46_12995: IAI46_12995 - hypothetical protein, at 2,772,078 to 2,772,257
_12995
IAI46_13000: IAI46_13000 - protein MgtS, at 2,772,368 to 2,772,460
_13000
IAI46_13005: IAI46_13005 - magnesium transporter, at 2,772,603 to 2,773,622
_13005
Position (kb)
2770
2771
2772
2773 Strain fitness (log2 ratio)
-1
0
1 at 2769.726 kb on + strand, within IAI46_12980 at 2769.726 kb on + strand, within IAI46_12980 at 2770.209 kb on - strand at 2770.338 kb on + strand, within IAI46_12985 at 2770.339 kb on - strand, within IAI46_12985 at 2770.344 kb on + strand, within IAI46_12985 at 2770.351 kb on + strand, within IAI46_12985 at 2770.407 kb on - strand, within IAI46_12985 at 2770.431 kb on + strand, within IAI46_12985 at 2770.467 kb on - strand, within IAI46_12985 at 2770.670 kb on + strand at 2770.683 kb on + strand at 2770.709 kb on - strand at 2770.709 kb on - strand at 2770.742 kb on - strand at 2770.785 kb on + strand at 2770.786 kb on - strand at 2770.786 kb on - strand at 2770.786 kb on - strand at 2770.818 kb on + strand, within IAI46_12990 at 2770.853 kb on - strand, within IAI46_12990 at 2770.857 kb on + strand, within IAI46_12990 at 2770.858 kb on - strand, within IAI46_12990 at 2771.240 kb on + strand, within IAI46_12990 at 2771.241 kb on - strand, within IAI46_12990 at 2771.287 kb on - strand, within IAI46_12990 at 2771.504 kb on - strand, within IAI46_12990 at 2771.590 kb on - strand, within IAI46_12990 at 2771.768 kb on + strand, within IAI46_12990 at 2771.804 kb on - strand, within IAI46_12990 at 2771.956 kb on - strand at 2772.055 kb on - strand at 2772.055 kb on - strand at 2772.101 kb on - strand, within IAI46_12995 at 2772.101 kb on - strand, within IAI46_12995 at 2772.129 kb on - strand, within IAI46_12995 at 2772.259 kb on - strand at 2772.360 kb on - strand at 2772.370 kb on - strand at 2772.392 kb on - strand, within IAI46_13000 at 2772.792 kb on - strand, within IAI46_13005 at 2772.795 kb on - strand, within IAI46_13005 at 2772.795 kb on - strand, within IAI46_13005 at 2772.948 kb on - strand, within IAI46_13005 at 2772.948 kb on - strand, within IAI46_13005 at 2773.014 kb on + strand, within IAI46_13005 at 2773.048 kb on - strand, within IAI46_13005
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum potassium sulfate dodecahydrate 1 mM, aerobic remove 2,769,726 + IAI46_12980 0.75 +0.3 2,769,726 + IAI46_12980 0.75 +0.4 2,770,209 - -1.1 2,770,338 + IAI46_12985 0.30 +1.2 2,770,339 - IAI46_12985 0.30 -1.1 2,770,344 + IAI46_12985 0.31 +0.2 2,770,351 + IAI46_12985 0.33 +0.3 2,770,407 - IAI46_12985 0.45 -0.5 2,770,431 + IAI46_12985 0.50 +0.2 2,770,467 - IAI46_12985 0.58 -0.4 2,770,670 + -0.1 2,770,683 + -0.5 2,770,709 - +0.4 2,770,709 - +0.8 2,770,742 - +0.1 2,770,785 + +1.5 2,770,786 - -0.3 2,770,786 - +0.5 2,770,786 - +0.4 2,770,818 + IAI46_12990 0.11 -0.8 2,770,853 - IAI46_12990 0.13 +0.8 2,770,857 + IAI46_12990 0.14 +0.9 2,770,858 - IAI46_12990 0.14 -0.4 2,771,240 + IAI46_12990 0.41 -0.1 2,771,241 - IAI46_12990 0.41 -0.1 2,771,287 - IAI46_12990 0.45 -0.7 2,771,504 - IAI46_12990 0.60 -0.1 2,771,590 - IAI46_12990 0.67 +0.5 2,771,768 + IAI46_12990 0.79 +1.5 2,771,804 - IAI46_12990 0.82 +0.3 2,771,956 - +1.7 2,772,055 - +0.3 2,772,055 - +0.7 2,772,101 - IAI46_12995 0.13 -0.0 2,772,101 - IAI46_12995 0.13 +0.6 2,772,129 - IAI46_12995 0.28 -0.5 2,772,259 - +0.8 2,772,360 - -1.5 2,772,370 - +1.0 2,772,392 - IAI46_13000 0.26 +0.4 2,772,792 - IAI46_13005 0.19 -0.8 2,772,795 - IAI46_13005 0.19 +0.0 2,772,795 - IAI46_13005 0.19 +0.3 2,772,948 - IAI46_13005 0.34 +0.9 2,772,948 - IAI46_13005 0.34 +0.6 2,773,014 + IAI46_13005 0.40 -0.5 2,773,048 - IAI46_13005 0.44 +1.5
Or see this region's nucleotide sequence