Experiment: Aluminum potassium sulfate dodecahydrate 1 mM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_12190 and IAI46_12195 are separated by 565 nucleotides IAI46_12195 and IAI46_12200 are separated by 56 nucleotides IAI46_12200 and IAI46_12205 are separated by 37 nucleotides IAI46_12205 and IAI46_12210 are separated by 240 nucleotides
IAI46_12190: IAI46_12190 - hypothetical protein, at 2,585,559 to 2,586,083
_12190
IAI46_12195: IAI46_12195 - CopG family transcriptional regulator, at 2,586,649 to 2,586,843
_12195
IAI46_12200: IAI46_12200 - fused MFS/spermidine synthase, at 2,586,900 to 2,587,688
_12200
IAI46_12205: IAI46_12205 - 3-hydroxyacyl-ACP dehydratase FabZ, at 2,587,726 to 2,588,181
_12205
IAI46_12210: IAI46_12210 - TIGR00645 family protein, at 2,588,422 to 2,588,916
_12210
Position (kb)
2586
2587
2588 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2586.166 kb on - strand at 2586.452 kb on - strand at 2586.511 kb on + strand at 2586.538 kb on - strand at 2586.719 kb on + strand, within IAI46_12195 at 2586.728 kb on - strand, within IAI46_12195 at 2586.728 kb on - strand, within IAI46_12195 at 2586.865 kb on + strand at 2586.893 kb on + strand at 2586.905 kb on + strand at 2586.937 kb on + strand at 2586.937 kb on + strand at 2587.028 kb on - strand, within IAI46_12200 at 2587.028 kb on - strand, within IAI46_12200 at 2587.087 kb on - strand, within IAI46_12200 at 2587.129 kb on + strand, within IAI46_12200 at 2587.138 kb on - strand, within IAI46_12200 at 2587.310 kb on + strand, within IAI46_12200 at 2587.388 kb on + strand, within IAI46_12200 at 2587.389 kb on - strand, within IAI46_12200 at 2587.399 kb on + strand, within IAI46_12200 at 2587.400 kb on - strand, within IAI46_12200 at 2587.498 kb on + strand, within IAI46_12200 at 2587.499 kb on - strand, within IAI46_12200 at 2587.499 kb on - strand, within IAI46_12200 at 2587.503 kb on - strand, within IAI46_12200 at 2587.599 kb on - strand, within IAI46_12200 at 2587.665 kb on + strand at 2587.688 kb on + strand at 2587.689 kb on - strand at 2587.689 kb on - strand at 2587.727 kb on + strand at 2587.727 kb on + strand at 2587.727 kb on + strand at 2587.728 kb on - strand at 2587.728 kb on - strand at 2587.728 kb on - strand at 2587.901 kb on + strand, within IAI46_12205 at 2587.902 kb on - strand, within IAI46_12205 at 2587.981 kb on + strand, within IAI46_12205 at 2588.044 kb on - strand, within IAI46_12205 at 2588.059 kb on - strand, within IAI46_12205 at 2588.256 kb on + strand at 2588.257 kb on - strand at 2588.264 kb on + strand at 2588.362 kb on - strand at 2588.501 kb on + strand, within IAI46_12210 at 2588.502 kb on - strand, within IAI46_12210 at 2588.502 kb on - strand, within IAI46_12210
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum potassium sulfate dodecahydrate 1 mM, aerobic remove 2,586,166 - -0.3 2,586,452 - -0.1 2,586,511 + -0.1 2,586,538 - +0.4 2,586,719 + IAI46_12195 0.36 -0.5 2,586,728 - IAI46_12195 0.41 -0.5 2,586,728 - IAI46_12195 0.41 -0.6 2,586,865 + -1.4 2,586,893 + -0.3 2,586,905 + -1.7 2,586,937 + +0.5 2,586,937 + -0.4 2,587,028 - IAI46_12200 0.16 +1.0 2,587,028 - IAI46_12200 0.16 +0.5 2,587,087 - IAI46_12200 0.24 -0.3 2,587,129 + IAI46_12200 0.29 +0.1 2,587,138 - IAI46_12200 0.30 +2.2 2,587,310 + IAI46_12200 0.52 +2.8 2,587,388 + IAI46_12200 0.62 -0.8 2,587,389 - IAI46_12200 0.62 +0.5 2,587,399 + IAI46_12200 0.63 -1.1 2,587,400 - IAI46_12200 0.63 +0.6 2,587,498 + IAI46_12200 0.76 +1.0 2,587,499 - IAI46_12200 0.76 -1.1 2,587,499 - IAI46_12200 0.76 +0.6 2,587,503 - IAI46_12200 0.76 +0.9 2,587,599 - IAI46_12200 0.89 +1.0 2,587,665 + +0.4 2,587,688 + -0.2 2,587,689 - -0.4 2,587,689 - +0.5 2,587,727 + +0.9 2,587,727 + +0.5 2,587,727 + -0.3 2,587,728 - +0.8 2,587,728 - -0.0 2,587,728 - -0.1 2,587,901 + IAI46_12205 0.38 -0.3 2,587,902 - IAI46_12205 0.39 -0.2 2,587,981 + IAI46_12205 0.56 +0.5 2,588,044 - IAI46_12205 0.70 +2.1 2,588,059 - IAI46_12205 0.73 +0.2 2,588,256 + +0.6 2,588,257 - +0.5 2,588,264 + -1.5 2,588,362 - +0.3 2,588,501 + IAI46_12210 0.16 +0.9 2,588,502 - IAI46_12210 0.16 -0.2 2,588,502 - IAI46_12210 0.16 -1.8
Or see this region's nucleotide sequence