Experiment: Aluminum potassium sulfate dodecahydrate 1 mM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_11185 and IAI46_11190 are separated by 404 nucleotides IAI46_11190 and IAI46_11195 are separated by 123 nucleotides IAI46_11195 and IAI46_11200 are separated by 20 nucleotides IAI46_11200 and IAI46_11205 are separated by 20 nucleotides IAI46_11205 and IAI46_11210 are separated by 189 nucleotides
IAI46_11185: IAI46_11185 - pyruvate kinase PykF, at 2,364,719 to 2,366,131
_11185
IAI46_11190: IAI46_11190 - cupin, at 2,366,536 to 2,366,841
_11190
IAI46_11195: IAI46_11195 - tRNA-Val, at 2,366,965 to 2,367,041
_11195
IAI46_11200: IAI46_11200 - tRNA-Val, at 2,367,062 to 2,367,138
_11200
IAI46_11205: IAI46_11205 - tRNA-Val, at 2,367,159 to 2,367,235
_11205
IAI46_11210: IAI46_11210 - MATE family efflux transporter, at 2,367,425 to 2,368,801
_11210
Position (kb)
2366
2367
2368 Strain fitness (log2 ratio)
-1
0
1 at 2366.043 kb on - strand at 2366.043 kb on - strand at 2366.232 kb on - strand at 2366.389 kb on - strand at 2366.391 kb on - strand at 2366.511 kb on - strand at 2366.862 kb on - strand at 2366.876 kb on + strand at 2366.877 kb on - strand at 2366.913 kb on - strand at 2367.021 kb on - strand, within IAI46_11195 at 2367.144 kb on - strand at 2367.144 kb on - strand at 2367.422 kb on + strand at 2367.482 kb on - strand at 2367.482 kb on - strand at 2367.649 kb on + strand, within IAI46_11210 at 2367.655 kb on + strand, within IAI46_11210 at 2367.656 kb on - strand, within IAI46_11210 at 2367.656 kb on - strand, within IAI46_11210 at 2367.768 kb on + strand, within IAI46_11210
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum potassium sulfate dodecahydrate 1 mM, aerobic remove 2,366,043 - +1.6 2,366,043 - +0.6 2,366,232 - +0.9 2,366,389 - +1.6 2,366,391 - +0.1 2,366,511 - +0.1 2,366,862 - +0.1 2,366,876 + +0.6 2,366,877 - +0.1 2,366,913 - -0.1 2,367,021 - IAI46_11195 0.73 +0.3 2,367,144 - +0.2 2,367,144 - +0.3 2,367,422 + +0.3 2,367,482 - +0.7 2,367,482 - +0.4 2,367,649 + IAI46_11210 0.16 -0.1 2,367,655 + IAI46_11210 0.17 +0.2 2,367,656 - IAI46_11210 0.17 +0.1 2,367,656 - IAI46_11210 0.17 +0.1 2,367,768 + IAI46_11210 0.25 +0.2
Or see this region's nucleotide sequence