Strain Fitness in Serratia liquefaciens MT49 around IAI46_09815

Experiment: Aluminum potassium sulfate dodecahydrate 1 mM, aerobic

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntIAI46_09810 and IAI46_09815 overlap by 11 nucleotidesIAI46_09815 and IAI46_09820 overlap by 1 nucleotides IAI46_09810: IAI46_09810 - endolytic transglycosylase MltG, at 2,077,146 to 2,078,171 _09810 IAI46_09815: IAI46_09815 - dTMP kinase, at 2,078,161 to 2,078,796 _09815 IAI46_09820: IAI46_09820 - DNA polymerase III subunit delta', at 2,078,796 to 2,079,803 _09820 Position (kb) 2078 2079Strain fitness (log2 ratio) -1 0 1at 2077.415 kb on + strand, within IAI46_09810at 2077.553 kb on + strand, within IAI46_09810at 2077.644 kb on + strand, within IAI46_09810at 2077.873 kb on + strand, within IAI46_09810at 2077.914 kb on + strand, within IAI46_09810at 2077.914 kb on + strand, within IAI46_09810at 2077.914 kb on + strand, within IAI46_09810at 2077.914 kb on + strand, within IAI46_09810at 2077.914 kb on + strand, within IAI46_09810at 2077.914 kb on + strand, within IAI46_09810at 2077.914 kb on + strand, within IAI46_09810at 2077.968 kb on + strand, within IAI46_09810at 2077.968 kb on + strand, within IAI46_09810at 2077.968 kb on + strand, within IAI46_09810at 2078.117 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Aluminum potassium sulfate dodecahydrate 1 mM, aerobic
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2,077,415 + IAI46_09810 0.26 -0.2
2,077,553 + IAI46_09810 0.40 -0.2
2,077,644 + IAI46_09810 0.49 +0.3
2,077,873 + IAI46_09810 0.71 +0.5
2,077,914 + IAI46_09810 0.75 -0.6
2,077,914 + IAI46_09810 0.75 -1.0
2,077,914 + IAI46_09810 0.75 +0.1
2,077,914 + IAI46_09810 0.75 +0.0
2,077,914 + IAI46_09810 0.75 -0.9
2,077,914 + IAI46_09810 0.75 +0.5
2,077,914 + IAI46_09810 0.75 -0.5
2,077,968 + IAI46_09810 0.80 +1.7
2,077,968 + IAI46_09810 0.80 +0.4
2,077,968 + IAI46_09810 0.80 +0.2
2,078,117 + -1.1

Or see this region's nucleotide sequence