Strain Fitness in Serratia liquefaciens MT49 around IAI46_09745

Experiment: Aluminum potassium sulfate dodecahydrate 1 mM, aerobic

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntIAI46_09740 and IAI46_09745 are separated by 225 nucleotidesIAI46_09745 and IAI46_09750 are separated by 60 nucleotides IAI46_09740: IAI46_09740 - dihydroorotase, at 2,062,756 to 2,063,802 _09740 IAI46_09745: IAI46_09745 - antibiotic biosynthesis monooxygenase, at 2,064,028 to 2,064,315 _09745 IAI46_09750: IAI46_09750 - ribonuclease E, at 2,064,376 to 2,067,795 _09750 Position (kb) 2064 2065Strain fitness (log2 ratio) -3 -2 -1 0 1at 2063.116 kb on - strand, within IAI46_09740at 2063.118 kb on + strand, within IAI46_09740at 2063.179 kb on - strand, within IAI46_09740at 2063.243 kb on + strand, within IAI46_09740at 2063.243 kb on + strand, within IAI46_09740at 2063.243 kb on + strand, within IAI46_09740at 2063.260 kb on - strand, within IAI46_09740at 2063.263 kb on - strand, within IAI46_09740at 2063.281 kb on + strand, within IAI46_09740at 2063.282 kb on - strand, within IAI46_09740at 2063.282 kb on - strand, within IAI46_09740at 2063.645 kb on - strand, within IAI46_09740at 2063.650 kb on - strand, within IAI46_09740at 2063.653 kb on - strand, within IAI46_09740at 2063.696 kb on - strand, within IAI46_09740at 2063.696 kb on - strand, within IAI46_09740at 2063.708 kb on + strandat 2063.806 kb on - strandat 2063.880 kb on + strandat 2063.949 kb on + strandat 2063.965 kb on - strandat 2064.061 kb on - strand, within IAI46_09745at 2064.106 kb on - strand, within IAI46_09745at 2064.142 kb on + strand, within IAI46_09745at 2064.142 kb on + strand, within IAI46_09745at 2064.372 kb on + strandat 2064.373 kb on - strandat 2064.453 kb on + strandat 2064.512 kb on + strandat 2064.512 kb on + strandat 2064.553 kb on - strandat 2064.568 kb on - strandat 2064.895 kb on - strand, within IAI46_09750

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Per-strain Table

Position Strand Gene LocusTag Fraction Aluminum potassium sulfate dodecahydrate 1 mM, aerobic
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2,063,116 - IAI46_09740 0.34 -0.1
2,063,118 + IAI46_09740 0.35 -1.3
2,063,179 - IAI46_09740 0.40 -2.2
2,063,243 + IAI46_09740 0.47 -2.1
2,063,243 + IAI46_09740 0.47 -1.6
2,063,243 + IAI46_09740 0.47 +0.7
2,063,260 - IAI46_09740 0.48 -0.9
2,063,263 - IAI46_09740 0.48 -1.5
2,063,281 + IAI46_09740 0.50 +0.4
2,063,282 - IAI46_09740 0.50 -1.8
2,063,282 - IAI46_09740 0.50 +0.1
2,063,645 - IAI46_09740 0.85 -0.9
2,063,650 - IAI46_09740 0.85 -0.2
2,063,653 - IAI46_09740 0.86 -3.2
2,063,696 - IAI46_09740 0.90 +0.4
2,063,696 - IAI46_09740 0.90 -1.6
2,063,708 + -0.0
2,063,806 - -1.3
2,063,880 + +0.2
2,063,949 + +0.1
2,063,965 - +1.1
2,064,061 - IAI46_09745 0.11 -1.0
2,064,106 - IAI46_09745 0.27 -0.1
2,064,142 + IAI46_09745 0.40 +0.4
2,064,142 + IAI46_09745 0.40 -0.6
2,064,372 + -0.2
2,064,373 - +0.6
2,064,453 + +1.7
2,064,512 + +1.2
2,064,512 + -1.0
2,064,553 - -0.3
2,064,568 - -0.3
2,064,895 - IAI46_09750 0.15 -0.0

Or see this region's nucleotide sequence