Experiment: Aluminum potassium sulfate dodecahydrate 1 mM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_09620 and IAI46_09625 are separated by 62 nucleotides IAI46_09625 and IAI46_09630 are separated by 206 nucleotides IAI46_09630 and IAI46_09635 overlap by 16 nucleotides IAI46_09635 and IAI46_09640 are separated by 140 nucleotides
IAI46_09620: IAI46_09620 - N-acetyltransferase, at 2,042,446 to 2,042,994
_09620
IAI46_09625: IAI46_09625 - secY/secA suppressor protein, at 2,043,057 to 2,043,434
_09625
IAI46_09630: IAI46_09630 - 2-isopropylmalate synthase, at 2,043,641 to 2,045,311
_09630
IAI46_09635: IAI46_09635 - helix-turn-helix transcriptional regulator, at 2,045,296 to 2,046,057
_09635
IAI46_09640: IAI46_09640 - winged helix-turn-helix transcriptional regulator, at 2,046,198 to 2,046,509
_09640
Position (kb)
2043
2044
2045
2046 Strain fitness (log2 ratio)
-2
-1
0
1 at 2042.715 kb on + strand, within IAI46_09620 at 2042.715 kb on + strand, within IAI46_09620 at 2042.850 kb on + strand, within IAI46_09620 at 2042.889 kb on + strand, within IAI46_09620 at 2042.890 kb on - strand, within IAI46_09620 at 2042.890 kb on - strand, within IAI46_09620 at 2043.313 kb on + strand, within IAI46_09625 at 2043.424 kb on + strand at 2043.424 kb on + strand at 2043.425 kb on - strand at 2043.425 kb on - strand at 2043.453 kb on + strand at 2043.505 kb on + strand at 2043.506 kb on - strand at 2043.506 kb on - strand at 2043.605 kb on + strand at 2043.784 kb on + strand at 2043.784 kb on + strand at 2043.784 kb on + strand at 2043.813 kb on - strand, within IAI46_09630 at 2043.935 kb on - strand, within IAI46_09630 at 2044.022 kb on + strand, within IAI46_09630 at 2044.024 kb on + strand, within IAI46_09630 at 2044.025 kb on - strand, within IAI46_09630 at 2044.112 kb on - strand, within IAI46_09630 at 2044.304 kb on + strand, within IAI46_09630 at 2044.511 kb on + strand, within IAI46_09630 at 2044.513 kb on + strand, within IAI46_09630 at 2044.582 kb on + strand, within IAI46_09630 at 2044.582 kb on + strand, within IAI46_09630 at 2044.722 kb on - strand, within IAI46_09630 at 2044.758 kb on - strand, within IAI46_09630 at 2045.015 kb on + strand, within IAI46_09630 at 2045.016 kb on - strand, within IAI46_09630 at 2045.017 kb on + strand, within IAI46_09630 at 2045.018 kb on - strand, within IAI46_09630 at 2045.144 kb on + strand, within IAI46_09630 at 2045.144 kb on + strand, within IAI46_09630 at 2045.193 kb on - strand at 2045.529 kb on + strand, within IAI46_09635 at 2045.529 kb on + strand, within IAI46_09635 at 2045.542 kb on + strand, within IAI46_09635 at 2045.543 kb on - strand, within IAI46_09635 at 2045.574 kb on + strand, within IAI46_09635 at 2045.806 kb on + strand, within IAI46_09635 at 2045.807 kb on - strand, within IAI46_09635 at 2045.966 kb on + strand, within IAI46_09635 at 2046.150 kb on - strand at 2046.156 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum potassium sulfate dodecahydrate 1 mM, aerobic remove 2,042,715 + IAI46_09620 0.49 -0.2 2,042,715 + IAI46_09620 0.49 +0.8 2,042,850 + IAI46_09620 0.74 -1.5 2,042,889 + IAI46_09620 0.81 +1.3 2,042,890 - IAI46_09620 0.81 +0.2 2,042,890 - IAI46_09620 0.81 +0.7 2,043,313 + IAI46_09625 0.68 -0.8 2,043,424 + -1.6 2,043,424 + -0.7 2,043,425 - +0.4 2,043,425 - +1.0 2,043,453 + +0.0 2,043,505 + -0.2 2,043,506 - +0.1 2,043,506 - -0.5 2,043,605 + -0.2 2,043,784 + +0.8 2,043,784 + +0.2 2,043,784 + +0.5 2,043,813 - IAI46_09630 0.10 +0.6 2,043,935 - IAI46_09630 0.18 -0.2 2,044,022 + IAI46_09630 0.23 -1.3 2,044,024 + IAI46_09630 0.23 -0.5 2,044,025 - IAI46_09630 0.23 +0.1 2,044,112 - IAI46_09630 0.28 +1.7 2,044,304 + IAI46_09630 0.40 +0.4 2,044,511 + IAI46_09630 0.52 -1.9 2,044,513 + IAI46_09630 0.52 +0.0 2,044,582 + IAI46_09630 0.56 -0.5 2,044,582 + IAI46_09630 0.56 +0.2 2,044,722 - IAI46_09630 0.65 -1.0 2,044,758 - IAI46_09630 0.67 +0.4 2,045,015 + IAI46_09630 0.82 -0.1 2,045,016 - IAI46_09630 0.82 +0.1 2,045,017 + IAI46_09630 0.82 +0.3 2,045,018 - IAI46_09630 0.82 +0.3 2,045,144 + IAI46_09630 0.90 +0.5 2,045,144 + IAI46_09630 0.90 -1.0 2,045,193 - -0.2 2,045,529 + IAI46_09635 0.31 +0.3 2,045,529 + IAI46_09635 0.31 +1.7 2,045,542 + IAI46_09635 0.32 -0.5 2,045,543 - IAI46_09635 0.32 +0.2 2,045,574 + IAI46_09635 0.36 +0.7 2,045,806 + IAI46_09635 0.67 -0.1 2,045,807 - IAI46_09635 0.67 +1.3 2,045,966 + IAI46_09635 0.88 +0.4 2,046,150 - +0.2 2,046,156 + -0.2
Or see this region's nucleotide sequence