Experiment: Aluminum potassium sulfate dodecahydrate 1 mM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_09255 and IAI46_09260 are separated by 54 nucleotides IAI46_09260 and IAI46_09265 are separated by 232 nucleotides
IAI46_09255: IAI46_09255 - 6-phospho-beta-glucosidase, at 1,978,141 to 1,979,442
_09255
IAI46_09260: IAI46_09260 - PTS cellobiose transporter subunit IIC, at 1,979,497 to 1,980,858
_09260
IAI46_09265: IAI46_09265 - kdo(2)-lipid A phosphoethanolamine 7''-transferase, at 1,981,091 to 1,982,743
_09265
Position (kb)
1979
1980
1981 Strain fitness (log2 ratio)
-2
-1
0
1 at 1978.594 kb on - strand, within IAI46_09255 at 1978.652 kb on + strand, within IAI46_09255 at 1978.652 kb on + strand, within IAI46_09255 at 1978.653 kb on - strand, within IAI46_09255 at 1978.737 kb on + strand, within IAI46_09255 at 1978.737 kb on + strand, within IAI46_09255 at 1978.748 kb on + strand, within IAI46_09255 at 1978.748 kb on + strand, within IAI46_09255 at 1978.758 kb on - strand, within IAI46_09255 at 1978.894 kb on + strand, within IAI46_09255 at 1978.894 kb on + strand, within IAI46_09255 at 1978.894 kb on + strand, within IAI46_09255 at 1979.001 kb on - strand, within IAI46_09255 at 1979.012 kb on - strand, within IAI46_09255 at 1979.072 kb on - strand, within IAI46_09255 at 1979.112 kb on + strand, within IAI46_09255 at 1979.112 kb on + strand, within IAI46_09255 at 1979.149 kb on - strand, within IAI46_09255 at 1979.149 kb on - strand, within IAI46_09255 at 1979.422 kb on + strand at 1979.440 kb on + strand at 1979.458 kb on + strand at 1979.459 kb on - strand at 1979.508 kb on - strand at 1979.527 kb on + strand at 1979.527 kb on + strand at 1979.528 kb on - strand at 1979.528 kb on - strand at 1979.531 kb on + strand at 1979.532 kb on - strand at 1979.592 kb on - strand at 1979.602 kb on - strand at 1979.602 kb on - strand at 1979.662 kb on + strand, within IAI46_09260 at 1979.734 kb on + strand, within IAI46_09260 at 1979.735 kb on - strand, within IAI46_09260 at 1979.751 kb on + strand, within IAI46_09260 at 1979.751 kb on + strand, within IAI46_09260 at 1979.799 kb on + strand, within IAI46_09260 at 1979.986 kb on + strand, within IAI46_09260 at 1980.000 kb on + strand, within IAI46_09260 at 1980.021 kb on + strand, within IAI46_09260 at 1980.021 kb on + strand, within IAI46_09260 at 1980.021 kb on + strand, within IAI46_09260 at 1980.358 kb on - strand, within IAI46_09260 at 1980.380 kb on + strand, within IAI46_09260 at 1980.380 kb on + strand, within IAI46_09260 at 1980.499 kb on - strand, within IAI46_09260 at 1980.501 kb on + strand, within IAI46_09260 at 1980.547 kb on + strand, within IAI46_09260 at 1980.565 kb on - strand, within IAI46_09260 at 1980.699 kb on + strand, within IAI46_09260 at 1980.700 kb on - strand, within IAI46_09260 at 1980.912 kb on + strand at 1980.946 kb on - strand at 1980.988 kb on + strand at 1980.989 kb on - strand at 1980.989 kb on - strand at 1980.989 kb on - strand at 1980.999 kb on + strand at 1981.011 kb on - strand at 1981.011 kb on - strand at 1981.058 kb on + strand at 1981.058 kb on + strand at 1981.145 kb on + strand at 1981.155 kb on + strand at 1981.155 kb on + strand at 1981.158 kb on + strand at 1981.254 kb on + strand at 1981.261 kb on + strand, within IAI46_09265 at 1981.273 kb on + strand, within IAI46_09265 at 1981.273 kb on + strand, within IAI46_09265 at 1981.273 kb on + strand, within IAI46_09265 at 1981.274 kb on - strand, within IAI46_09265 at 1981.346 kb on + strand, within IAI46_09265 at 1981.347 kb on - strand, within IAI46_09265 at 1981.349 kb on + strand, within IAI46_09265 at 1981.349 kb on + strand, within IAI46_09265 at 1981.349 kb on + strand, within IAI46_09265 at 1981.350 kb on - strand, within IAI46_09265 at 1981.350 kb on - strand, within IAI46_09265 at 1981.350 kb on - strand, within IAI46_09265 at 1981.452 kb on + strand, within IAI46_09265 at 1981.452 kb on + strand, within IAI46_09265 at 1981.453 kb on - strand, within IAI46_09265 at 1981.489 kb on + strand, within IAI46_09265 at 1981.489 kb on + strand, within IAI46_09265 at 1981.565 kb on - strand, within IAI46_09265 at 1981.791 kb on - strand, within IAI46_09265 at 1981.820 kb on + strand, within IAI46_09265 at 1981.821 kb on - strand, within IAI46_09265
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum potassium sulfate dodecahydrate 1 mM, aerobic remove 1,978,594 - IAI46_09255 0.35 -0.7 1,978,652 + IAI46_09255 0.39 +0.7 1,978,652 + IAI46_09255 0.39 -1.0 1,978,653 - IAI46_09255 0.39 -1.1 1,978,737 + IAI46_09255 0.46 +0.0 1,978,737 + IAI46_09255 0.46 +0.9 1,978,748 + IAI46_09255 0.47 -0.1 1,978,748 + IAI46_09255 0.47 +0.7 1,978,758 - IAI46_09255 0.47 -2.3 1,978,894 + IAI46_09255 0.58 +0.2 1,978,894 + IAI46_09255 0.58 +0.6 1,978,894 + IAI46_09255 0.58 +0.8 1,979,001 - IAI46_09255 0.66 +1.2 1,979,012 - IAI46_09255 0.67 +0.7 1,979,072 - IAI46_09255 0.72 +0.1 1,979,112 + IAI46_09255 0.75 -1.3 1,979,112 + IAI46_09255 0.75 -0.3 1,979,149 - IAI46_09255 0.77 +0.2 1,979,149 - IAI46_09255 0.77 -0.1 1,979,422 + -0.3 1,979,440 + +0.6 1,979,458 + -0.3 1,979,459 - -1.2 1,979,508 - +0.4 1,979,527 + -0.3 1,979,527 + +0.6 1,979,528 - +0.5 1,979,528 - -0.2 1,979,531 + +0.2 1,979,532 - -0.5 1,979,592 - -0.3 1,979,602 - -0.5 1,979,602 - +0.7 1,979,662 + IAI46_09260 0.12 +0.6 1,979,734 + IAI46_09260 0.17 +0.5 1,979,735 - IAI46_09260 0.17 -0.3 1,979,751 + IAI46_09260 0.19 -0.5 1,979,751 + IAI46_09260 0.19 -0.6 1,979,799 + IAI46_09260 0.22 -0.2 1,979,986 + IAI46_09260 0.36 +1.7 1,980,000 + IAI46_09260 0.37 +0.1 1,980,021 + IAI46_09260 0.38 +0.5 1,980,021 + IAI46_09260 0.38 +0.4 1,980,021 + IAI46_09260 0.38 +0.3 1,980,358 - IAI46_09260 0.63 -1.7 1,980,380 + IAI46_09260 0.65 +0.2 1,980,380 + IAI46_09260 0.65 +0.0 1,980,499 - IAI46_09260 0.74 +0.0 1,980,501 + IAI46_09260 0.74 +0.4 1,980,547 + IAI46_09260 0.77 -1.6 1,980,565 - IAI46_09260 0.78 -0.4 1,980,699 + IAI46_09260 0.88 -0.7 1,980,700 - IAI46_09260 0.88 +0.6 1,980,912 + +0.3 1,980,946 - -0.1 1,980,988 + +0.8 1,980,989 - +0.0 1,980,989 - +0.7 1,980,989 - +0.5 1,980,999 + +0.9 1,981,011 - +0.4 1,981,011 - +0.4 1,981,058 + -1.2 1,981,058 + +1.2 1,981,145 + +0.4 1,981,155 + +0.5 1,981,155 + +0.9 1,981,158 + -0.6 1,981,254 + +0.2 1,981,261 + IAI46_09265 0.10 +0.3 1,981,273 + IAI46_09265 0.11 -0.6 1,981,273 + IAI46_09265 0.11 +0.0 1,981,273 + IAI46_09265 0.11 -0.2 1,981,274 - IAI46_09265 0.11 +0.4 1,981,346 + IAI46_09265 0.15 -1.1 1,981,347 - IAI46_09265 0.15 -0.8 1,981,349 + IAI46_09265 0.16 -0.8 1,981,349 + IAI46_09265 0.16 -0.3 1,981,349 + IAI46_09265 0.16 +0.8 1,981,350 - IAI46_09265 0.16 +0.6 1,981,350 - IAI46_09265 0.16 +0.1 1,981,350 - IAI46_09265 0.16 +0.3 1,981,452 + IAI46_09265 0.22 +1.1 1,981,452 + IAI46_09265 0.22 +0.3 1,981,453 - IAI46_09265 0.22 -0.1 1,981,489 + IAI46_09265 0.24 -0.6 1,981,489 + IAI46_09265 0.24 -0.5 1,981,565 - IAI46_09265 0.29 +0.4 1,981,791 - IAI46_09265 0.42 -0.6 1,981,820 + IAI46_09265 0.44 +1.1 1,981,821 - IAI46_09265 0.44 -0.4
Or see this region's nucleotide sequence