Experiment: Aluminum potassium sulfate dodecahydrate 1 mM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_09065 and IAI46_09070 are separated by 517 nucleotides IAI46_09070 and IAI46_09075 are separated by 149 nucleotides IAI46_09075 and IAI46_09080 are separated by 90 nucleotides IAI46_09080 and IAI46_09085 are separated by 13 nucleotides
IAI46_09065: IAI46_09065 - CDP-glycerol glycerophosphotransferase family protein, at 1,943,357 to 1,944,892
_09065
IAI46_09070: IAI46_09070 - endonuclease, at 1,945,410 to 1,946,234
_09070
IAI46_09075: IAI46_09075 - hypothetical protein, at 1,946,384 to 1,946,584
_09075
IAI46_09080: IAI46_09080 - cell envelope integrity protein TolA, at 1,946,675 to 1,947,118
_09080
IAI46_09085: IAI46_09085 - VTT domain-containing protein, at 1,947,132 to 1,947,626
_09085
Position (kb)
1945
1946
1947 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1944.445 kb on - strand, within IAI46_09065 at 1944.445 kb on - strand, within IAI46_09065 at 1944.473 kb on - strand, within IAI46_09065 at 1944.874 kb on - strand at 1944.979 kb on + strand at 1945.071 kb on + strand at 1945.076 kb on + strand at 1945.190 kb on - strand at 1945.190 kb on - strand at 1945.190 kb on - strand at 1945.297 kb on + strand at 1945.300 kb on + strand at 1945.300 kb on + strand at 1945.301 kb on - strand at 1945.324 kb on - strand at 1945.324 kb on - strand at 1945.400 kb on + strand at 1945.400 kb on + strand at 1945.477 kb on + strand at 1945.477 kb on + strand at 1945.552 kb on + strand, within IAI46_09070 at 1945.553 kb on - strand, within IAI46_09070 at 1945.725 kb on + strand, within IAI46_09070 at 1945.726 kb on - strand, within IAI46_09070 at 1945.777 kb on + strand, within IAI46_09070 at 1945.855 kb on + strand, within IAI46_09070 at 1945.896 kb on + strand, within IAI46_09070 at 1945.896 kb on + strand, within IAI46_09070 at 1945.897 kb on - strand, within IAI46_09070 at 1945.936 kb on - strand, within IAI46_09070 at 1945.936 kb on - strand, within IAI46_09070 at 1945.966 kb on + strand, within IAI46_09070 at 1946.044 kb on - strand, within IAI46_09070 at 1946.044 kb on - strand, within IAI46_09070 at 1946.089 kb on - strand, within IAI46_09070 at 1946.131 kb on - strand, within IAI46_09070 at 1946.131 kb on - strand, within IAI46_09070 at 1946.131 kb on - strand, within IAI46_09070 at 1946.135 kb on - strand, within IAI46_09070 at 1946.135 kb on - strand, within IAI46_09070 at 1946.230 kb on + strand at 1946.230 kb on + strand at 1946.230 kb on + strand at 1946.230 kb on + strand at 1946.231 kb on - strand at 1946.231 kb on - strand at 1946.231 kb on - strand at 1946.231 kb on - strand at 1946.258 kb on - strand at 1946.258 kb on - strand at 1946.287 kb on - strand at 1946.298 kb on - strand at 1946.371 kb on + strand at 1946.371 kb on + strand at 1946.379 kb on + strand at 1946.379 kb on + strand at 1946.379 kb on + strand at 1946.390 kb on - strand at 1946.390 kb on - strand at 1946.398 kb on - strand at 1946.421 kb on + strand, within IAI46_09075 at 1946.421 kb on + strand, within IAI46_09075 at 1946.422 kb on - strand, within IAI46_09075 at 1946.524 kb on - strand, within IAI46_09075 at 1946.592 kb on + strand at 1946.641 kb on + strand at 1946.660 kb on - strand at 1946.719 kb on - strand at 1946.830 kb on + strand, within IAI46_09080 at 1946.869 kb on + strand, within IAI46_09080 at 1946.870 kb on - strand, within IAI46_09080 at 1946.976 kb on + strand, within IAI46_09080 at 1946.977 kb on - strand, within IAI46_09080 at 1946.977 kb on - strand, within IAI46_09080 at 1947.085 kb on + strand at 1947.133 kb on + strand at 1947.134 kb on - strand at 1947.200 kb on - strand, within IAI46_09085 at 1947.200 kb on - strand, within IAI46_09085
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum potassium sulfate dodecahydrate 1 mM, aerobic remove 1,944,445 - IAI46_09065 0.71 -0.3 1,944,445 - IAI46_09065 0.71 +0.5 1,944,473 - IAI46_09065 0.73 -0.3 1,944,874 - +0.9 1,944,979 + -1.7 1,945,071 + +0.8 1,945,076 + -0.1 1,945,190 - +0.2 1,945,190 - -0.6 1,945,190 - +0.9 1,945,297 + +0.5 1,945,300 + +0.4 1,945,300 + -0.9 1,945,301 - +2.2 1,945,324 - +0.8 1,945,324 - +0.3 1,945,400 + -1.8 1,945,400 + -0.7 1,945,477 + +0.1 1,945,477 + -1.7 1,945,552 + IAI46_09070 0.17 +0.2 1,945,553 - IAI46_09070 0.17 +0.4 1,945,725 + IAI46_09070 0.38 -0.7 1,945,726 - IAI46_09070 0.38 -0.0 1,945,777 + IAI46_09070 0.44 +0.5 1,945,855 + IAI46_09070 0.54 +1.5 1,945,896 + IAI46_09070 0.59 +0.5 1,945,896 + IAI46_09070 0.59 +1.0 1,945,897 - IAI46_09070 0.59 +1.8 1,945,936 - IAI46_09070 0.64 -1.6 1,945,936 - IAI46_09070 0.64 +0.3 1,945,966 + IAI46_09070 0.67 -1.3 1,946,044 - IAI46_09070 0.77 -0.1 1,946,044 - IAI46_09070 0.77 -0.0 1,946,089 - IAI46_09070 0.82 -2.1 1,946,131 - IAI46_09070 0.87 -0.2 1,946,131 - IAI46_09070 0.87 +1.4 1,946,131 - IAI46_09070 0.87 +1.1 1,946,135 - IAI46_09070 0.88 -0.0 1,946,135 - IAI46_09070 0.88 +1.0 1,946,230 + -0.7 1,946,230 + -0.9 1,946,230 + -0.4 1,946,230 + -1.0 1,946,231 - -0.9 1,946,231 - +0.6 1,946,231 - +0.4 1,946,231 - +0.8 1,946,258 - +0.6 1,946,258 - +0.6 1,946,287 - -1.4 1,946,298 - +0.3 1,946,371 + +0.2 1,946,371 + +0.6 1,946,379 + +0.2 1,946,379 + -0.6 1,946,379 + -0.2 1,946,390 - -1.8 1,946,390 - -1.2 1,946,398 - +0.4 1,946,421 + IAI46_09075 0.18 +1.5 1,946,421 + IAI46_09075 0.18 +0.5 1,946,422 - IAI46_09075 0.19 -0.0 1,946,524 - IAI46_09075 0.70 +0.9 1,946,592 + -0.1 1,946,641 + +0.5 1,946,660 - +0.7 1,946,719 - +0.2 1,946,830 + IAI46_09080 0.35 +1.2 1,946,869 + IAI46_09080 0.44 +1.3 1,946,870 - IAI46_09080 0.44 -0.8 1,946,976 + IAI46_09080 0.68 +0.8 1,946,977 - IAI46_09080 0.68 +0.3 1,946,977 - IAI46_09080 0.68 -1.0 1,947,085 + +0.8 1,947,133 + -0.7 1,947,134 - +0.8 1,947,200 - IAI46_09085 0.14 +0.3 1,947,200 - IAI46_09085 0.14 +0.5
Or see this region's nucleotide sequence