Experiment: Aluminum potassium sulfate dodecahydrate 1 mM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_08840 and IAI46_08845 are separated by 271 nucleotides IAI46_08845 and IAI46_08850 are separated by 64 nucleotides IAI46_08850 and IAI46_08855 overlap by 4 nucleotides IAI46_08855 and IAI46_08860 are separated by 129 nucleotides
IAI46_08840: IAI46_08840 - membrane integrity-associated transporter subunit PqiC, at 1,899,040 to 1,899,597
_08840
IAI46_08845: IAI46_08845 - ribosome modulation factor, at 1,899,869 to 1,900,039
_08845
IAI46_08850: IAI46_08850 - beta-ketoacyl-ACP synthase II, at 1,900,104 to 1,901,378
_08850
IAI46_08855: IAI46_08855 - helix-turn-helix transcriptional regulator, at 1,901,375 to 1,901,902
_08855
IAI46_08860: IAI46_08860 - bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase, at 1,902,032 to 1,902,550
_08860
Position (kb)
1900
1901
1902 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1899.110 kb on - strand, within IAI46_08840 at 1899.112 kb on + strand, within IAI46_08840 at 1899.203 kb on - strand, within IAI46_08840 at 1899.247 kb on + strand, within IAI46_08840 at 1899.247 kb on + strand, within IAI46_08840 at 1899.248 kb on - strand, within IAI46_08840 at 1899.252 kb on + strand, within IAI46_08840 at 1899.264 kb on + strand, within IAI46_08840 at 1899.265 kb on - strand, within IAI46_08840 at 1899.315 kb on + strand, within IAI46_08840 at 1899.621 kb on + strand at 1899.621 kb on + strand at 1899.685 kb on - strand at 1899.705 kb on + strand at 1899.734 kb on + strand at 1899.789 kb on - strand at 1899.795 kb on - strand at 1899.801 kb on + strand at 1899.852 kb on + strand at 1899.852 kb on + strand at 1899.852 kb on + strand at 1899.928 kb on + strand, within IAI46_08845 at 1899.960 kb on - strand, within IAI46_08845 at 1900.065 kb on + strand at 1900.096 kb on - strand at 1900.106 kb on - strand at 1900.131 kb on - strand at 1900.174 kb on + strand at 1900.174 kb on + strand at 1900.199 kb on + strand at 1900.363 kb on - strand, within IAI46_08850 at 1900.363 kb on - strand, within IAI46_08850 at 1900.392 kb on - strand, within IAI46_08850 at 1900.546 kb on + strand, within IAI46_08850 at 1900.841 kb on + strand, within IAI46_08850 at 1901.064 kb on - strand, within IAI46_08850 at 1901.309 kb on + strand at 1901.317 kb on - strand at 1901.379 kb on - strand at 1901.379 kb on - strand at 1901.482 kb on + strand, within IAI46_08855 at 1901.483 kb on - strand, within IAI46_08855 at 1901.483 kb on - strand, within IAI46_08855 at 1901.488 kb on + strand, within IAI46_08855 at 1901.531 kb on + strand, within IAI46_08855 at 1901.599 kb on + strand, within IAI46_08855 at 1901.671 kb on - strand, within IAI46_08855 at 1901.676 kb on - strand, within IAI46_08855 at 1901.701 kb on + strand, within IAI46_08855 at 1901.702 kb on - strand, within IAI46_08855 at 1901.765 kb on + strand, within IAI46_08855 at 1901.907 kb on + strand at 1901.907 kb on + strand at 1901.907 kb on + strand at 1901.907 kb on + strand at 1901.908 kb on - strand at 1901.922 kb on - strand at 1901.927 kb on - strand at 1901.943 kb on + strand at 1901.965 kb on + strand at 1901.979 kb on + strand at 1901.980 kb on - strand at 1901.982 kb on + strand at 1901.983 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum potassium sulfate dodecahydrate 1 mM, aerobic remove 1,899,110 - IAI46_08840 0.13 +0.7 1,899,112 + IAI46_08840 0.13 +0.8 1,899,203 - IAI46_08840 0.29 -0.0 1,899,247 + IAI46_08840 0.37 +0.7 1,899,247 + IAI46_08840 0.37 -0.9 1,899,248 - IAI46_08840 0.37 -1.1 1,899,252 + IAI46_08840 0.38 -0.8 1,899,264 + IAI46_08840 0.40 -0.1 1,899,265 - IAI46_08840 0.40 +0.0 1,899,315 + IAI46_08840 0.49 -0.5 1,899,621 + +0.4 1,899,621 + -0.7 1,899,685 - +0.6 1,899,705 + +0.0 1,899,734 + +0.3 1,899,789 - -0.8 1,899,795 - +0.3 1,899,801 + +1.5 1,899,852 + +0.2 1,899,852 + -1.2 1,899,852 + +0.1 1,899,928 + IAI46_08845 0.35 +0.6 1,899,960 - IAI46_08845 0.53 +0.7 1,900,065 + -2.6 1,900,096 - -1.2 1,900,106 - -0.4 1,900,131 - -0.3 1,900,174 + -0.6 1,900,174 + +0.2 1,900,199 + +0.6 1,900,363 - IAI46_08850 0.20 -0.2 1,900,363 - IAI46_08850 0.20 -1.3 1,900,392 - IAI46_08850 0.23 +0.6 1,900,546 + IAI46_08850 0.35 -0.0 1,900,841 + IAI46_08850 0.58 +1.8 1,901,064 - IAI46_08850 0.75 +0.4 1,901,309 + +0.0 1,901,317 - +0.3 1,901,379 - +1.7 1,901,379 - +1.8 1,901,482 + IAI46_08855 0.20 -0.2 1,901,483 - IAI46_08855 0.20 -0.6 1,901,483 - IAI46_08855 0.20 +0.2 1,901,488 + IAI46_08855 0.21 +0.2 1,901,531 + IAI46_08855 0.30 +0.8 1,901,599 + IAI46_08855 0.42 +0.3 1,901,671 - IAI46_08855 0.56 +1.1 1,901,676 - IAI46_08855 0.57 +0.2 1,901,701 + IAI46_08855 0.62 +0.5 1,901,702 - IAI46_08855 0.62 -1.1 1,901,765 + IAI46_08855 0.74 -1.0 1,901,907 + -0.4 1,901,907 + -0.3 1,901,907 + +1.5 1,901,907 + -0.8 1,901,908 - +0.2 1,901,922 - +0.8 1,901,927 - +0.6 1,901,943 + -0.2 1,901,965 + -0.2 1,901,979 + +0.1 1,901,980 - -0.1 1,901,982 + +0.0 1,901,983 - -0.3
Or see this region's nucleotide sequence