Experiment: Aluminum potassium sulfate dodecahydrate 1 mM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_08820 and IAI46_08825 are separated by 5 nucleotides IAI46_08825 and IAI46_08830 are separated by 74 nucleotides
IAI46_08820: IAI46_08820 - bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL, at 1,892,001 to 1,894,121
_08820
IAI46_08825: IAI46_08825 - ABC transporter ATP-binding protein, at 1,894,127 to 1,896,031
_08825
IAI46_08830: IAI46_08830 - membrane integrity-associated transporter subunit PqiA, at 1,896,106 to 1,897,413
_08830
Position (kb)
1894
1895
1896
1897 Strain fitness (log2 ratio)
-1
0
1 at 1893.262 kb on - strand, within IAI46_08820 at 1893.322 kb on + strand, within IAI46_08820 at 1893.330 kb on + strand, within IAI46_08820 at 1893.471 kb on + strand, within IAI46_08820 at 1893.518 kb on + strand, within IAI46_08820 at 1893.549 kb on + strand, within IAI46_08820 at 1893.593 kb on + strand, within IAI46_08820 at 1893.644 kb on + strand, within IAI46_08820 at 1893.661 kb on + strand, within IAI46_08820 at 1893.713 kb on + strand, within IAI46_08820 at 1893.717 kb on + strand, within IAI46_08820 at 1893.944 kb on + strand at 1894.119 kb on + strand at 1894.123 kb on + strand at 1894.123 kb on + strand at 1894.126 kb on + strand at 1894.127 kb on - strand at 1894.187 kb on - strand at 1894.484 kb on - strand, within IAI46_08825 at 1894.838 kb on + strand, within IAI46_08825 at 1894.839 kb on - strand, within IAI46_08825 at 1894.839 kb on - strand, within IAI46_08825 at 1894.839 kb on - strand, within IAI46_08825 at 1894.847 kb on + strand, within IAI46_08825 at 1894.847 kb on + strand, within IAI46_08825 at 1894.848 kb on - strand, within IAI46_08825 at 1894.980 kb on + strand, within IAI46_08825 at 1894.999 kb on - strand, within IAI46_08825 at 1895.002 kb on + strand, within IAI46_08825 at 1895.003 kb on - strand, within IAI46_08825 at 1895.254 kb on - strand, within IAI46_08825 at 1895.283 kb on - strand, within IAI46_08825 at 1895.393 kb on + strand, within IAI46_08825 at 1895.394 kb on - strand, within IAI46_08825 at 1895.464 kb on + strand, within IAI46_08825 at 1895.464 kb on + strand, within IAI46_08825 at 1895.759 kb on - strand, within IAI46_08825 at 1895.816 kb on + strand, within IAI46_08825 at 1895.816 kb on + strand, within IAI46_08825 at 1895.816 kb on + strand, within IAI46_08825 at 1895.816 kb on + strand, within IAI46_08825 at 1895.816 kb on + strand, within IAI46_08825 at 1895.817 kb on - strand, within IAI46_08825 at 1895.818 kb on + strand, within IAI46_08825 at 1895.818 kb on + strand, within IAI46_08825 at 1895.818 kb on + strand, within IAI46_08825 at 1895.819 kb on - strand, within IAI46_08825 at 1896.105 kb on + strand at 1896.217 kb on + strand at 1896.218 kb on - strand at 1896.218 kb on - strand at 1896.218 kb on - strand at 1896.299 kb on - strand, within IAI46_08830 at 1896.425 kb on - strand, within IAI46_08830 at 1896.425 kb on - strand, within IAI46_08830 at 1896.447 kb on + strand, within IAI46_08830 at 1896.447 kb on + strand, within IAI46_08830 at 1896.458 kb on + strand, within IAI46_08830 at 1896.458 kb on + strand, within IAI46_08830 at 1896.642 kb on - strand, within IAI46_08830 at 1896.668 kb on - strand, within IAI46_08830 at 1896.820 kb on - strand, within IAI46_08830 at 1896.874 kb on + strand, within IAI46_08830 at 1896.874 kb on + strand, within IAI46_08830 at 1896.928 kb on - strand, within IAI46_08830 at 1896.928 kb on - strand, within IAI46_08830 at 1896.938 kb on + strand, within IAI46_08830 at 1896.938 kb on - strand, within IAI46_08830 at 1896.940 kb on - strand, within IAI46_08830 at 1896.960 kb on + strand, within IAI46_08830 at 1896.961 kb on - strand, within IAI46_08830 at 1896.961 kb on - strand, within IAI46_08830 at 1896.963 kb on + strand, within IAI46_08830 at 1896.963 kb on + strand, within IAI46_08830 at 1896.964 kb on - strand, within IAI46_08830 at 1896.964 kb on - strand, within IAI46_08830
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum potassium sulfate dodecahydrate 1 mM, aerobic remove 1,893,262 - IAI46_08820 0.59 -0.7 1,893,322 + IAI46_08820 0.62 +1.0 1,893,330 + IAI46_08820 0.63 +0.2 1,893,471 + IAI46_08820 0.69 +1.4 1,893,518 + IAI46_08820 0.72 +0.1 1,893,549 + IAI46_08820 0.73 +1.2 1,893,593 + IAI46_08820 0.75 +0.6 1,893,644 + IAI46_08820 0.77 +0.4 1,893,661 + IAI46_08820 0.78 -1.0 1,893,713 + IAI46_08820 0.81 +0.8 1,893,717 + IAI46_08820 0.81 -0.4 1,893,944 + +0.5 1,894,119 + -1.6 1,894,123 + +0.6 1,894,123 + -0.6 1,894,126 + -0.3 1,894,127 - +0.7 1,894,187 - -0.3 1,894,484 - IAI46_08825 0.19 +0.8 1,894,838 + IAI46_08825 0.37 +1.4 1,894,839 - IAI46_08825 0.37 -0.2 1,894,839 - IAI46_08825 0.37 +0.8 1,894,839 - IAI46_08825 0.37 -0.3 1,894,847 + IAI46_08825 0.38 +0.6 1,894,847 + IAI46_08825 0.38 +1.0 1,894,848 - IAI46_08825 0.38 +0.4 1,894,980 + IAI46_08825 0.45 +0.1 1,894,999 - IAI46_08825 0.46 -1.5 1,895,002 + IAI46_08825 0.46 -0.1 1,895,003 - IAI46_08825 0.46 +0.4 1,895,254 - IAI46_08825 0.59 -0.7 1,895,283 - IAI46_08825 0.61 +0.5 1,895,393 + IAI46_08825 0.66 -1.4 1,895,394 - IAI46_08825 0.67 -0.2 1,895,464 + IAI46_08825 0.70 +0.1 1,895,464 + IAI46_08825 0.70 +0.7 1,895,759 - IAI46_08825 0.86 +0.8 1,895,816 + IAI46_08825 0.89 -0.8 1,895,816 + IAI46_08825 0.89 -0.3 1,895,816 + IAI46_08825 0.89 +1.2 1,895,816 + IAI46_08825 0.89 +0.8 1,895,816 + IAI46_08825 0.89 -0.0 1,895,817 - IAI46_08825 0.89 +0.4 1,895,818 + IAI46_08825 0.89 +0.6 1,895,818 + IAI46_08825 0.89 -0.7 1,895,818 + IAI46_08825 0.89 +1.0 1,895,819 - IAI46_08825 0.89 +0.3 1,896,105 + +0.2 1,896,217 + -0.5 1,896,218 - +0.4 1,896,218 - +0.6 1,896,218 - -0.8 1,896,299 - IAI46_08830 0.15 +0.7 1,896,425 - IAI46_08830 0.24 +1.1 1,896,425 - IAI46_08830 0.24 +0.3 1,896,447 + IAI46_08830 0.26 -0.7 1,896,447 + IAI46_08830 0.26 +1.0 1,896,458 + IAI46_08830 0.27 -0.2 1,896,458 + IAI46_08830 0.27 +0.2 1,896,642 - IAI46_08830 0.41 -0.6 1,896,668 - IAI46_08830 0.43 -1.0 1,896,820 - IAI46_08830 0.55 -0.2 1,896,874 + IAI46_08830 0.59 +0.8 1,896,874 + IAI46_08830 0.59 +0.6 1,896,928 - IAI46_08830 0.63 +0.8 1,896,928 - IAI46_08830 0.63 +0.7 1,896,938 + IAI46_08830 0.64 -0.9 1,896,938 - IAI46_08830 0.64 +0.8 1,896,940 - IAI46_08830 0.64 +1.5 1,896,960 + IAI46_08830 0.65 +0.5 1,896,961 - IAI46_08830 0.65 -1.2 1,896,961 - IAI46_08830 0.65 +0.6 1,896,963 + IAI46_08830 0.66 +0.5 1,896,963 + IAI46_08830 0.66 +0.5 1,896,964 - IAI46_08830 0.66 +0.3 1,896,964 - IAI46_08830 0.66 -0.2
Or see this region's nucleotide sequence