Experiment: Aluminum potassium sulfate dodecahydrate 1 mM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_08580 and IAI46_08585 are separated by 137 nucleotides IAI46_08585 and IAI46_08590 are separated by 1 nucleotides IAI46_08590 and IAI46_08595 are separated by 52 nucleotides
IAI46_08580: IAI46_08580 - dimethyl sulfoxide reductase subunit A, at 1,830,766 to 1,833,219
_08580
IAI46_08585: IAI46_08585 - dimethylsulfoxide reductase subunit B, at 1,833,357 to 1,833,974
_08585
IAI46_08590: IAI46_08590 - dimethyl sulfoxide reductase anchor subunit family protein, at 1,833,976 to 1,834,836
_08590
IAI46_08595: IAI46_08595 - Tat proofreading chaperone DmsD, at 1,834,889 to 1,835,506
_08595
Position (kb)
1833
1834 Strain fitness (log2 ratio)
-2
-1
0
1 at 1832.377 kb on - strand, within IAI46_08580 at 1832.390 kb on - strand, within IAI46_08580 at 1832.461 kb on + strand, within IAI46_08580 at 1832.461 kb on + strand, within IAI46_08580 at 1832.462 kb on - strand, within IAI46_08580 at 1832.597 kb on - strand, within IAI46_08580 at 1832.597 kb on - strand, within IAI46_08580 at 1832.613 kb on + strand, within IAI46_08580 at 1832.624 kb on - strand, within IAI46_08580 at 1832.624 kb on - strand, within IAI46_08580 at 1832.726 kb on - strand, within IAI46_08580 at 1832.728 kb on + strand, within IAI46_08580 at 1832.797 kb on - strand, within IAI46_08580 at 1832.800 kb on + strand, within IAI46_08580 at 1832.845 kb on + strand, within IAI46_08580 at 1832.893 kb on - strand, within IAI46_08580 at 1832.916 kb on - strand, within IAI46_08580 at 1833.003 kb on + strand at 1833.177 kb on + strand at 1833.189 kb on + strand at 1833.190 kb on - strand at 1833.215 kb on + strand at 1833.227 kb on + strand at 1833.227 kb on + strand at 1833.227 kb on + strand at 1833.275 kb on + strand at 1833.276 kb on - strand at 1833.279 kb on - strand at 1833.279 kb on - strand at 1833.279 kb on - strand at 1833.279 kb on - strand at 1833.285 kb on - strand at 1833.305 kb on + strand at 1833.306 kb on - strand at 1833.333 kb on - strand at 1833.344 kb on - strand at 1833.438 kb on - strand, within IAI46_08585 at 1833.474 kb on + strand, within IAI46_08585 at 1833.475 kb on - strand, within IAI46_08585 at 1833.475 kb on - strand, within IAI46_08585 at 1833.475 kb on - strand, within IAI46_08585 at 1833.480 kb on + strand, within IAI46_08585 at 1833.481 kb on - strand, within IAI46_08585 at 1833.540 kb on + strand, within IAI46_08585 at 1833.688 kb on - strand, within IAI46_08585 at 1833.744 kb on + strand, within IAI46_08585 at 1833.745 kb on - strand, within IAI46_08585 at 1833.745 kb on - strand, within IAI46_08585 at 1833.768 kb on - strand, within IAI46_08585 at 1834.014 kb on + strand at 1834.230 kb on + strand, within IAI46_08590 at 1834.347 kb on - strand, within IAI46_08590 at 1834.366 kb on + strand, within IAI46_08590 at 1834.366 kb on + strand, within IAI46_08590 at 1834.383 kb on - strand, within IAI46_08590 at 1834.383 kb on - strand, within IAI46_08590 at 1834.384 kb on + strand, within IAI46_08590 at 1834.385 kb on - strand, within IAI46_08590 at 1834.385 kb on - strand, within IAI46_08590 at 1834.413 kb on + strand, within IAI46_08590 at 1834.425 kb on + strand, within IAI46_08590 at 1834.506 kb on + strand, within IAI46_08590 at 1834.507 kb on - strand, within IAI46_08590 at 1834.569 kb on + strand, within IAI46_08590 at 1834.610 kb on + strand, within IAI46_08590 at 1834.611 kb on - strand, within IAI46_08590 at 1834.640 kb on - strand, within IAI46_08590 at 1834.649 kb on + strand, within IAI46_08590 at 1834.806 kb on + strand at 1834.807 kb on - strand at 1834.837 kb on + strand at 1834.837 kb on + strand at 1834.838 kb on - strand at 1834.842 kb on + strand at 1834.871 kb on + strand at 1834.872 kb on - strand at 1834.888 kb on + strand at 1834.940 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum potassium sulfate dodecahydrate 1 mM, aerobic remove 1,832,377 - IAI46_08580 0.66 -0.4 1,832,390 - IAI46_08580 0.66 -0.1 1,832,461 + IAI46_08580 0.69 -0.4 1,832,461 + IAI46_08580 0.69 -2.0 1,832,462 - IAI46_08580 0.69 -1.1 1,832,597 - IAI46_08580 0.75 -1.3 1,832,597 - IAI46_08580 0.75 -1.0 1,832,613 + IAI46_08580 0.75 +1.1 1,832,624 - IAI46_08580 0.76 +0.1 1,832,624 - IAI46_08580 0.76 +0.9 1,832,726 - IAI46_08580 0.80 -0.3 1,832,728 + IAI46_08580 0.80 +0.4 1,832,797 - IAI46_08580 0.83 -1.3 1,832,800 + IAI46_08580 0.83 +0.9 1,832,845 + IAI46_08580 0.85 +0.3 1,832,893 - IAI46_08580 0.87 -0.3 1,832,916 - IAI46_08580 0.88 +0.6 1,833,003 + -0.2 1,833,177 + +1.0 1,833,189 + +0.5 1,833,190 - +0.2 1,833,215 + -0.1 1,833,227 + -0.3 1,833,227 + -0.4 1,833,227 + +0.1 1,833,275 + +0.2 1,833,276 - -0.1 1,833,279 - -0.9 1,833,279 - +0.3 1,833,279 - +1.1 1,833,279 - +1.0 1,833,285 - -0.0 1,833,305 + +0.3 1,833,306 - +1.1 1,833,333 - -0.1 1,833,344 - -0.2 1,833,438 - IAI46_08585 0.13 +1.5 1,833,474 + IAI46_08585 0.19 +0.4 1,833,475 - IAI46_08585 0.19 +0.9 1,833,475 - IAI46_08585 0.19 -0.6 1,833,475 - IAI46_08585 0.19 -0.7 1,833,480 + IAI46_08585 0.20 -0.3 1,833,481 - IAI46_08585 0.20 -0.1 1,833,540 + IAI46_08585 0.30 -0.8 1,833,688 - IAI46_08585 0.54 +0.5 1,833,744 + IAI46_08585 0.63 +0.3 1,833,745 - IAI46_08585 0.63 +1.2 1,833,745 - IAI46_08585 0.63 +1.1 1,833,768 - IAI46_08585 0.67 +0.4 1,834,014 + +0.1 1,834,230 + IAI46_08590 0.30 +0.5 1,834,347 - IAI46_08590 0.43 -0.4 1,834,366 + IAI46_08590 0.45 +0.4 1,834,366 + IAI46_08590 0.45 +0.2 1,834,383 - IAI46_08590 0.47 -0.1 1,834,383 - IAI46_08590 0.47 -0.6 1,834,384 + IAI46_08590 0.47 +1.4 1,834,385 - IAI46_08590 0.48 +0.4 1,834,385 - IAI46_08590 0.48 +0.1 1,834,413 + IAI46_08590 0.51 +0.6 1,834,425 + IAI46_08590 0.52 +0.4 1,834,506 + IAI46_08590 0.62 -0.2 1,834,507 - IAI46_08590 0.62 -0.4 1,834,569 + IAI46_08590 0.69 +0.1 1,834,610 + IAI46_08590 0.74 -0.2 1,834,611 - IAI46_08590 0.74 +1.0 1,834,640 - IAI46_08590 0.77 +0.1 1,834,649 + IAI46_08590 0.78 +0.2 1,834,806 + +1.4 1,834,807 - -0.1 1,834,837 + -0.3 1,834,837 + +1.0 1,834,838 - +1.0 1,834,842 + +0.8 1,834,871 + +0.1 1,834,872 - -0.2 1,834,888 + -0.7 1,834,940 + -0.1
Or see this region's nucleotide sequence