Strain Fitness in Serratia liquefaciens MT49 around IAI46_08150

Experiment: Aluminum potassium sulfate dodecahydrate 1 mM, aerobic

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntIAI46_08140 and IAI46_08145 overlap by 4 nucleotidesIAI46_08145 and IAI46_08150 are separated by 14 nucleotidesIAI46_08150 and IAI46_08155 are separated by 16 nucleotides IAI46_08140: IAI46_08140 - UDP-galactopyranose mutase, at 1,731,305 to 1,732,459 _08140 IAI46_08145: IAI46_08145 - glycosyltransferase, at 1,732,456 to 1,733,352 _08145 IAI46_08150: IAI46_08150 - glycosyltransferase family 4 protein, at 1,733,367 to 1,734,509 _08150 IAI46_08155: IAI46_08155 - polysaccharide pyruvyl transferase family protein, at 1,734,526 to 1,735,716 _08155 Position (kb) 1733 1734 1735Strain fitness (log2 ratio) -2 -1 0 1 2at 1732.400 kb on + strandat 1732.429 kb on + strandat 1732.429 kb on + strandat 1732.473 kb on - strandat 1732.552 kb on - strand, within IAI46_08145at 1732.599 kb on + strand, within IAI46_08145at 1732.709 kb on + strand, within IAI46_08145at 1732.710 kb on - strand, within IAI46_08145at 1732.713 kb on + strand, within IAI46_08145at 1732.713 kb on + strand, within IAI46_08145at 1732.812 kb on + strand, within IAI46_08145at 1732.812 kb on + strand, within IAI46_08145at 1732.812 kb on + strand, within IAI46_08145at 1732.813 kb on - strand, within IAI46_08145at 1732.886 kb on - strand, within IAI46_08145at 1732.906 kb on + strand, within IAI46_08145at 1732.907 kb on - strand, within IAI46_08145at 1732.941 kb on + strand, within IAI46_08145at 1732.942 kb on - strand, within IAI46_08145at 1733.027 kb on - strand, within IAI46_08145at 1733.047 kb on + strand, within IAI46_08145at 1733.048 kb on - strand, within IAI46_08145at 1733.048 kb on - strand, within IAI46_08145at 1733.080 kb on + strand, within IAI46_08145at 1733.152 kb on + strand, within IAI46_08145at 1733.152 kb on + strand, within IAI46_08145at 1733.153 kb on - strand, within IAI46_08145at 1733.156 kb on - strand, within IAI46_08145at 1733.181 kb on + strand, within IAI46_08145at 1733.292 kb on + strandat 1733.296 kb on + strandat 1733.441 kb on + strandat 1733.454 kb on + strandat 1733.615 kb on + strand, within IAI46_08150at 1733.629 kb on + strand, within IAI46_08150at 1733.693 kb on + strand, within IAI46_08150at 1733.693 kb on + strand, within IAI46_08150at 1733.694 kb on - strand, within IAI46_08150at 1733.738 kb on + strand, within IAI46_08150at 1733.739 kb on - strand, within IAI46_08150at 1733.791 kb on + strand, within IAI46_08150at 1733.795 kb on + strand, within IAI46_08150at 1733.916 kb on - strand, within IAI46_08150at 1734.058 kb on + strand, within IAI46_08150at 1734.058 kb on + strand, within IAI46_08150at 1734.092 kb on + strand, within IAI46_08150at 1734.092 kb on + strand, within IAI46_08150at 1734.094 kb on + strand, within IAI46_08150at 1734.094 kb on + strand, within IAI46_08150at 1734.165 kb on + strand, within IAI46_08150at 1734.165 kb on + strand, within IAI46_08150at 1734.165 kb on + strand, within IAI46_08150at 1734.185 kb on + strand, within IAI46_08150at 1734.185 kb on + strand, within IAI46_08150at 1734.185 kb on + strand, within IAI46_08150at 1734.203 kb on + strand, within IAI46_08150at 1734.203 kb on + strand, within IAI46_08150at 1734.204 kb on - strand, within IAI46_08150at 1734.211 kb on - strand, within IAI46_08150at 1734.338 kb on + strand, within IAI46_08150at 1734.397 kb on + strandat 1734.397 kb on + strandat 1734.522 kb on + strandat 1734.523 kb on - strandat 1734.564 kb on + strandat 1734.588 kb on - strandat 1734.604 kb on + strandat 1734.604 kb on + strandat 1734.605 kb on - strandat 1734.605 kb on - strandat 1734.605 kb on - strandat 1734.608 kb on + strandat 1734.624 kb on + strandat 1734.625 kb on - strandat 1734.651 kb on - strand, within IAI46_08155at 1734.703 kb on + strand, within IAI46_08155at 1734.703 kb on + strand, within IAI46_08155at 1734.704 kb on - strand, within IAI46_08155at 1734.766 kb on + strand, within IAI46_08155at 1734.766 kb on + strand, within IAI46_08155at 1734.766 kb on + strand, within IAI46_08155at 1734.767 kb on - strand, within IAI46_08155at 1734.767 kb on - strand, within IAI46_08155at 1734.873 kb on + strand, within IAI46_08155at 1734.888 kb on + strand, within IAI46_08155at 1734.910 kb on + strand, within IAI46_08155at 1734.911 kb on - strand, within IAI46_08155at 1734.947 kb on + strand, within IAI46_08155at 1734.991 kb on + strand, within IAI46_08155at 1735.096 kb on + strand, within IAI46_08155at 1735.096 kb on + strand, within IAI46_08155at 1735.098 kb on + strand, within IAI46_08155at 1735.103 kb on + strand, within IAI46_08155at 1735.219 kb on - strand, within IAI46_08155at 1735.245 kb on + strand, within IAI46_08155at 1735.250 kb on + strand, within IAI46_08155

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Per-strain Table

Position Strand Gene LocusTag Fraction Aluminum potassium sulfate dodecahydrate 1 mM, aerobic
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1,732,400 + +2.0
1,732,429 + +0.0
1,732,429 + -1.0
1,732,473 - -0.7
1,732,552 - IAI46_08145 0.11 -0.3
1,732,599 + IAI46_08145 0.16 +0.2
1,732,709 + IAI46_08145 0.28 +0.6
1,732,710 - IAI46_08145 0.28 -0.5
1,732,713 + IAI46_08145 0.29 +0.1
1,732,713 + IAI46_08145 0.29 +0.3
1,732,812 + IAI46_08145 0.40 +1.0
1,732,812 + IAI46_08145 0.40 +0.2
1,732,812 + IAI46_08145 0.40 -1.5
1,732,813 - IAI46_08145 0.40 +0.7
1,732,886 - IAI46_08145 0.48 +0.3
1,732,906 + IAI46_08145 0.50 -0.7
1,732,907 - IAI46_08145 0.50 +1.3
1,732,941 + IAI46_08145 0.54 +1.0
1,732,942 - IAI46_08145 0.54 -0.0
1,733,027 - IAI46_08145 0.64 -0.6
1,733,047 + IAI46_08145 0.66 -0.3
1,733,048 - IAI46_08145 0.66 -0.0
1,733,048 - IAI46_08145 0.66 -0.8
1,733,080 + IAI46_08145 0.70 +0.1
1,733,152 + IAI46_08145 0.78 +0.5
1,733,152 + IAI46_08145 0.78 -0.2
1,733,153 - IAI46_08145 0.78 -1.3
1,733,156 - IAI46_08145 0.78 -0.0
1,733,181 + IAI46_08145 0.81 +0.2
1,733,292 + +1.6
1,733,296 + -0.0
1,733,441 + -0.4
1,733,454 + -0.8
1,733,615 + IAI46_08150 0.22 -0.0
1,733,629 + IAI46_08150 0.23 +0.3
1,733,693 + IAI46_08150 0.29 -0.7
1,733,693 + IAI46_08150 0.29 -0.3
1,733,694 - IAI46_08150 0.29 +1.4
1,733,738 + IAI46_08150 0.32 +1.2
1,733,739 - IAI46_08150 0.33 -0.7
1,733,791 + IAI46_08150 0.37 +0.2
1,733,795 + IAI46_08150 0.37 +0.2
1,733,916 - IAI46_08150 0.48 -0.1
1,734,058 + IAI46_08150 0.60 +0.1
1,734,058 + IAI46_08150 0.60 +0.3
1,734,092 + IAI46_08150 0.63 +0.1
1,734,092 + IAI46_08150 0.63 +1.1
1,734,094 + IAI46_08150 0.64 +0.0
1,734,094 + IAI46_08150 0.64 +0.3
1,734,165 + IAI46_08150 0.70 -0.2
1,734,165 + IAI46_08150 0.70 -0.1
1,734,165 + IAI46_08150 0.70 -0.5
1,734,185 + IAI46_08150 0.72 -0.6
1,734,185 + IAI46_08150 0.72 -1.0
1,734,185 + IAI46_08150 0.72 +0.1
1,734,203 + IAI46_08150 0.73 -0.8
1,734,203 + IAI46_08150 0.73 +1.0
1,734,204 - IAI46_08150 0.73 +1.3
1,734,211 - IAI46_08150 0.74 +1.0
1,734,338 + IAI46_08150 0.85 -0.0
1,734,397 + -0.0
1,734,397 + +1.1
1,734,522 + +1.1
1,734,523 - +0.2
1,734,564 + +0.6
1,734,588 - -0.0
1,734,604 + +0.2
1,734,604 + +0.5
1,734,605 - -0.2
1,734,605 - +0.5
1,734,605 - -0.6
1,734,608 + -0.0
1,734,624 + +1.0
1,734,625 - -0.8
1,734,651 - IAI46_08155 0.10 -1.7
1,734,703 + IAI46_08155 0.15 +0.3
1,734,703 + IAI46_08155 0.15 -0.6
1,734,704 - IAI46_08155 0.15 +0.6
1,734,766 + IAI46_08155 0.20 -0.7
1,734,766 + IAI46_08155 0.20 +0.3
1,734,766 + IAI46_08155 0.20 +0.0
1,734,767 - IAI46_08155 0.20 +0.1
1,734,767 - IAI46_08155 0.20 -0.8
1,734,873 + IAI46_08155 0.29 -0.3
1,734,888 + IAI46_08155 0.30 +0.5
1,734,910 + IAI46_08155 0.32 -0.7
1,734,911 - IAI46_08155 0.32 +0.7
1,734,947 + IAI46_08155 0.35 +0.8
1,734,991 + IAI46_08155 0.39 +1.7
1,735,096 + IAI46_08155 0.48 -1.7
1,735,096 + IAI46_08155 0.48 -0.0
1,735,098 + IAI46_08155 0.48 +0.9
1,735,103 + IAI46_08155 0.48 +0.1
1,735,219 - IAI46_08155 0.58 -2.0
1,735,245 + IAI46_08155 0.60 +0.8
1,735,250 + IAI46_08155 0.61 -1.2

Or see this region's nucleotide sequence