Experiment: Aluminum potassium sulfate dodecahydrate 1 mM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_07430 and IAI46_07435 are separated by 380 nucleotides IAI46_07435 and IAI46_07440 are separated by 4 nucleotides IAI46_07440 and IAI46_07445 are separated by 62 nucleotides
IAI46_07430: IAI46_07430 - porin OmpC, at 1,570,690 to 1,571,787
_07430
IAI46_07435: IAI46_07435 - carboxymuconolactone decarboxylase family protein, at 1,572,168 to 1,572,485
_07435
IAI46_07440: IAI46_07440 - tautomerase family protein, at 1,572,490 to 1,572,876
_07440
IAI46_07445: IAI46_07445 - ATP-dependent DNA helicase DinG, at 1,572,939 to 1,575,137
_07445
Position (kb)
1572
1573 Strain fitness (log2 ratio)
-2
-1
0
1 at 1571.552 kb on + strand, within IAI46_07430 at 1571.621 kb on + strand, within IAI46_07430 at 1571.622 kb on - strand, within IAI46_07430 at 1571.622 kb on - strand, within IAI46_07430 at 1571.622 kb on - strand, within IAI46_07430 at 1571.710 kb on - strand at 1571.803 kb on - strand at 1571.821 kb on + strand at 1571.822 kb on - strand at 1571.822 kb on - strand at 1571.830 kb on + strand at 1571.831 kb on - strand at 1571.834 kb on - strand at 1571.834 kb on - strand at 1571.834 kb on - strand at 1571.834 kb on - strand at 1571.885 kb on + strand at 1571.889 kb on + strand at 1571.890 kb on - strand at 1571.890 kb on - strand at 1571.890 kb on - strand at 1571.890 kb on - strand at 1571.898 kb on + strand at 1572.030 kb on - strand at 1572.031 kb on + strand at 1572.067 kb on + strand at 1572.079 kb on + strand at 1572.080 kb on - strand at 1572.133 kb on - strand at 1572.137 kb on + strand at 1572.259 kb on + strand, within IAI46_07435 at 1572.260 kb on - strand, within IAI46_07435 at 1572.423 kb on + strand, within IAI46_07435 at 1572.484 kb on - strand at 1572.505 kb on - strand at 1572.646 kb on + strand, within IAI46_07440 at 1572.685 kb on + strand, within IAI46_07440 at 1572.685 kb on + strand, within IAI46_07440 at 1572.686 kb on - strand, within IAI46_07440 at 1572.686 kb on - strand, within IAI46_07440 at 1572.697 kb on + strand, within IAI46_07440 at 1572.806 kb on + strand, within IAI46_07440 at 1572.806 kb on + strand, within IAI46_07440 at 1572.807 kb on - strand, within IAI46_07440 at 1572.874 kb on + strand at 1572.874 kb on + strand at 1572.875 kb on - strand at 1572.906 kb on + strand at 1572.907 kb on - strand at 1572.928 kb on + strand at 1572.960 kb on - strand at 1573.184 kb on + strand, within IAI46_07445 at 1573.216 kb on - strand, within IAI46_07445 at 1573.291 kb on - strand, within IAI46_07445 at 1573.304 kb on + strand, within IAI46_07445 at 1573.493 kb on + strand, within IAI46_07445 at 1573.494 kb on - strand, within IAI46_07445 at 1573.539 kb on + strand, within IAI46_07445 at 1573.540 kb on - strand, within IAI46_07445 at 1573.540 kb on - strand, within IAI46_07445 at 1573.560 kb on + strand, within IAI46_07445 at 1573.560 kb on + strand, within IAI46_07445 at 1573.560 kb on + strand, within IAI46_07445 at 1573.563 kb on - strand, within IAI46_07445
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum potassium sulfate dodecahydrate 1 mM, aerobic remove 1,571,552 + IAI46_07430 0.79 -0.1 1,571,621 + IAI46_07430 0.85 +0.3 1,571,622 - IAI46_07430 0.85 +1.4 1,571,622 - IAI46_07430 0.85 -0.9 1,571,622 - IAI46_07430 0.85 +0.3 1,571,710 - +0.1 1,571,803 - -0.2 1,571,821 + +0.2 1,571,822 - +0.2 1,571,822 - +0.4 1,571,830 + +0.1 1,571,831 - -0.4 1,571,834 - +1.0 1,571,834 - +0.0 1,571,834 - +0.2 1,571,834 - +0.4 1,571,885 + -2.5 1,571,889 + -0.4 1,571,890 - +0.3 1,571,890 - -0.0 1,571,890 - -0.0 1,571,890 - +0.8 1,571,898 + +0.0 1,572,030 - +0.7 1,572,031 + +0.3 1,572,067 + -0.3 1,572,079 + +0.5 1,572,080 - +0.9 1,572,133 - -0.5 1,572,137 + -1.7 1,572,259 + IAI46_07435 0.29 +1.0 1,572,260 - IAI46_07435 0.29 +0.4 1,572,423 + IAI46_07435 0.80 -0.7 1,572,484 - +0.5 1,572,505 - +0.5 1,572,646 + IAI46_07440 0.40 -0.3 1,572,685 + IAI46_07440 0.50 +0.9 1,572,685 + IAI46_07440 0.50 -0.4 1,572,686 - IAI46_07440 0.51 +0.8 1,572,686 - IAI46_07440 0.51 -0.6 1,572,697 + IAI46_07440 0.53 +0.2 1,572,806 + IAI46_07440 0.82 +0.8 1,572,806 + IAI46_07440 0.82 -0.2 1,572,807 - IAI46_07440 0.82 +0.2 1,572,874 + +1.7 1,572,874 + +1.0 1,572,875 - +0.3 1,572,906 + +0.2 1,572,907 - -1.1 1,572,928 + +0.4 1,572,960 - +0.4 1,573,184 + IAI46_07445 0.11 -0.2 1,573,216 - IAI46_07445 0.13 -2.4 1,573,291 - IAI46_07445 0.16 -0.4 1,573,304 + IAI46_07445 0.17 +0.9 1,573,493 + IAI46_07445 0.25 -0.9 1,573,494 - IAI46_07445 0.25 +0.3 1,573,539 + IAI46_07445 0.27 +0.1 1,573,540 - IAI46_07445 0.27 +0.5 1,573,540 - IAI46_07445 0.27 -0.2 1,573,560 + IAI46_07445 0.28 +1.2 1,573,560 + IAI46_07445 0.28 +0.4 1,573,560 + IAI46_07445 0.28 +0.4 1,573,563 - IAI46_07445 0.28 +0.9
Or see this region's nucleotide sequence