Experiment: Aluminum potassium sulfate dodecahydrate 1 mM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_07235 and IAI46_07240 overlap by 4 nucleotides IAI46_07240 and IAI46_07245 are separated by 9 nucleotides IAI46_07245 and IAI46_07250 are separated by 9 nucleotides IAI46_07250 and IAI46_07255 overlap by 16 nucleotides IAI46_07255 and IAI46_07260 are separated by 140 nucleotides
IAI46_07235: IAI46_07235 - urea ABC transporter permease subunit UrtC, at 1,535,292 to 1,536,368
_07235
IAI46_07240: IAI46_07240 - urea ABC transporter ATP-binding protein UrtD, at 1,536,365 to 1,537,171
_07240
IAI46_07245: IAI46_07245 - urea ABC transporter ATP-binding subunit UrtE, at 1,537,181 to 1,537,879
_07245
IAI46_07250: IAI46_07250 - type II toxin-antitoxin system RelE/ParE family toxin, at 1,537,889 to 1,538,188
_07250
IAI46_07255: IAI46_07255 - type II toxin-antitoxin system ParD family antitoxin, at 1,538,173 to 1,538,436
_07255
IAI46_07260: IAI46_07260 - DUF2165 domain-containing protein, at 1,538,577 to 1,539,089
_07260
Position (kb)
1537
1538 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1536.228 kb on - strand, within IAI46_07235 at 1536.302 kb on + strand at 1536.303 kb on - strand at 1536.346 kb on + strand at 1536.346 kb on + strand at 1536.701 kb on - strand, within IAI46_07240 at 1536.984 kb on - strand, within IAI46_07240 at 1537.036 kb on - strand, within IAI46_07240 at 1537.083 kb on + strand, within IAI46_07240 at 1537.180 kb on + strand at 1537.209 kb on - strand at 1537.211 kb on + strand at 1537.230 kb on + strand at 1537.339 kb on + strand, within IAI46_07245 at 1537.402 kb on - strand, within IAI46_07245 at 1537.418 kb on + strand, within IAI46_07245 at 1537.418 kb on + strand, within IAI46_07245 at 1537.419 kb on - strand, within IAI46_07245 at 1537.419 kb on - strand, within IAI46_07245 at 1537.510 kb on + strand, within IAI46_07245 at 1537.510 kb on + strand, within IAI46_07245 at 1537.511 kb on - strand, within IAI46_07245 at 1537.511 kb on - strand, within IAI46_07245 at 1537.511 kb on - strand, within IAI46_07245 at 1537.525 kb on + strand, within IAI46_07245 at 1537.525 kb on + strand, within IAI46_07245 at 1537.526 kb on - strand, within IAI46_07245 at 1537.529 kb on + strand, within IAI46_07245 at 1537.529 kb on + strand, within IAI46_07245 at 1537.530 kb on - strand, within IAI46_07245 at 1537.537 kb on - strand, within IAI46_07245 at 1537.749 kb on + strand, within IAI46_07245 at 1537.749 kb on + strand, within IAI46_07245 at 1537.763 kb on + strand, within IAI46_07245 at 1537.790 kb on + strand, within IAI46_07245 at 1537.790 kb on + strand, within IAI46_07245 at 1537.791 kb on - strand, within IAI46_07245 at 1537.857 kb on + strand at 1537.875 kb on + strand at 1537.875 kb on + strand at 1537.875 kb on + strand at 1537.878 kb on - strand at 1537.891 kb on - strand at 1537.898 kb on - strand at 1537.950 kb on - strand, within IAI46_07250 at 1537.961 kb on - strand, within IAI46_07250 at 1538.028 kb on - strand, within IAI46_07250 at 1538.053 kb on + strand, within IAI46_07250 at 1538.054 kb on - strand, within IAI46_07250 at 1538.072 kb on - strand, within IAI46_07250 at 1538.078 kb on - strand, within IAI46_07250 at 1538.078 kb on - strand, within IAI46_07250 at 1538.089 kb on - strand, within IAI46_07250 at 1538.089 kb on - strand, within IAI46_07250 at 1538.089 kb on - strand, within IAI46_07250 at 1538.106 kb on - strand, within IAI46_07250 at 1538.133 kb on + strand, within IAI46_07250 at 1538.134 kb on - strand, within IAI46_07250 at 1538.361 kb on - strand, within IAI46_07255 at 1538.416 kb on + strand at 1538.454 kb on + strand at 1538.454 kb on + strand at 1538.454 kb on + strand at 1538.455 kb on - strand at 1538.455 kb on - strand at 1538.455 kb on - strand at 1538.480 kb on + strand at 1538.480 kb on + strand at 1538.481 kb on - strand at 1538.486 kb on - strand at 1538.488 kb on - strand at 1538.494 kb on + strand at 1538.494 kb on + strand at 1538.494 kb on + strand at 1538.494 kb on + strand at 1538.495 kb on - strand at 1538.499 kb on + strand at 1538.499 kb on + strand at 1538.500 kb on - strand at 1538.562 kb on + strand at 1538.663 kb on + strand, within IAI46_07260 at 1538.714 kb on + strand, within IAI46_07260 at 1538.714 kb on + strand, within IAI46_07260 at 1538.795 kb on + strand, within IAI46_07260 at 1538.799 kb on - strand, within IAI46_07260 at 1538.842 kb on + strand, within IAI46_07260 at 1538.862 kb on - strand, within IAI46_07260 at 1538.875 kb on - strand, within IAI46_07260 at 1538.875 kb on - strand, within IAI46_07260
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum potassium sulfate dodecahydrate 1 mM, aerobic remove 1,536,228 - IAI46_07235 0.87 +1.1 1,536,302 + +1.3 1,536,303 - -0.3 1,536,346 + -0.2 1,536,346 + +0.2 1,536,701 - IAI46_07240 0.42 +0.4 1,536,984 - IAI46_07240 0.77 -0.3 1,537,036 - IAI46_07240 0.83 +0.2 1,537,083 + IAI46_07240 0.89 +0.5 1,537,180 + -0.1 1,537,209 - -0.6 1,537,211 + +0.9 1,537,230 + +0.3 1,537,339 + IAI46_07245 0.23 +1.2 1,537,402 - IAI46_07245 0.32 -1.7 1,537,418 + IAI46_07245 0.34 -0.4 1,537,418 + IAI46_07245 0.34 +0.2 1,537,419 - IAI46_07245 0.34 -0.9 1,537,419 - IAI46_07245 0.34 +0.6 1,537,510 + IAI46_07245 0.47 +0.3 1,537,510 + IAI46_07245 0.47 -0.7 1,537,511 - IAI46_07245 0.47 +1.1 1,537,511 - IAI46_07245 0.47 +0.2 1,537,511 - IAI46_07245 0.47 -0.9 1,537,525 + IAI46_07245 0.49 +0.1 1,537,525 + IAI46_07245 0.49 -0.4 1,537,526 - IAI46_07245 0.49 +0.1 1,537,529 + IAI46_07245 0.50 -0.1 1,537,529 + IAI46_07245 0.50 +0.7 1,537,530 - IAI46_07245 0.50 -0.2 1,537,537 - IAI46_07245 0.51 -0.2 1,537,749 + IAI46_07245 0.81 +0.2 1,537,749 + IAI46_07245 0.81 -0.6 1,537,763 + IAI46_07245 0.83 -0.1 1,537,790 + IAI46_07245 0.87 -1.7 1,537,790 + IAI46_07245 0.87 -0.0 1,537,791 - IAI46_07245 0.87 +0.4 1,537,857 + +0.3 1,537,875 + -0.7 1,537,875 + -0.0 1,537,875 + +0.5 1,537,878 - -0.2 1,537,891 - -0.2 1,537,898 - -0.4 1,537,950 - IAI46_07250 0.20 +0.4 1,537,961 - IAI46_07250 0.24 -0.8 1,538,028 - IAI46_07250 0.46 -0.4 1,538,053 + IAI46_07250 0.55 +0.7 1,538,054 - IAI46_07250 0.55 -0.9 1,538,072 - IAI46_07250 0.61 -1.9 1,538,078 - IAI46_07250 0.63 +0.9 1,538,078 - IAI46_07250 0.63 +0.8 1,538,089 - IAI46_07250 0.67 -0.3 1,538,089 - IAI46_07250 0.67 +0.1 1,538,089 - IAI46_07250 0.67 +1.2 1,538,106 - IAI46_07250 0.72 +0.8 1,538,133 + IAI46_07250 0.81 +0.8 1,538,134 - IAI46_07250 0.82 -0.1 1,538,361 - IAI46_07255 0.71 -0.3 1,538,416 + +0.6 1,538,454 + +0.3 1,538,454 + +0.3 1,538,454 + -0.0 1,538,455 - +1.1 1,538,455 - +0.9 1,538,455 - -0.1 1,538,480 + +0.3 1,538,480 + +1.2 1,538,481 - -0.0 1,538,486 - +0.7 1,538,488 - +0.2 1,538,494 + -0.6 1,538,494 + +0.2 1,538,494 + +0.6 1,538,494 + +0.6 1,538,495 - +0.3 1,538,499 + -1.3 1,538,499 + +1.5 1,538,500 - +0.4 1,538,562 + -0.8 1,538,663 + IAI46_07260 0.17 +0.3 1,538,714 + IAI46_07260 0.27 -0.5 1,538,714 + IAI46_07260 0.27 -1.0 1,538,795 + IAI46_07260 0.42 +2.3 1,538,799 - IAI46_07260 0.43 -0.5 1,538,842 + IAI46_07260 0.52 -1.7 1,538,862 - IAI46_07260 0.56 +0.9 1,538,875 - IAI46_07260 0.58 +1.6 1,538,875 - IAI46_07260 0.58 -0.2
Or see this region's nucleotide sequence