Strain Fitness in Escherichia coli BW25113 around b4069

Experiment: casaminos (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	casaminos (N)
4,282,531	+	actP	b4067	0.76	-0.6
4,282,706	-	actP	b4067	0.87	+0.6
4,282,718	-	actP	b4067	0.87	+0.7
4,282,718	-	actP	b4067	0.87	-0.3
4,282,738	-	actP	b4067	0.89	-0.2
4,282,738	-	actP	b4067	0.89	-1.4
4,282,740	-	actP	b4067	0.89	-0.4
4,282,842	+				+0.1
4,282,864	-				-0.9
4,282,873	-				+0.9
4,282,909	+				-0.2
4,282,938	-				-0.1
4,282,990	+	yjcH	b4068	0.22	-0.7
4,283,005	+	yjcH	b4068	0.26	+0.1
4,283,013	-	yjcH	b4068	0.29	+1.0
4,283,013	-	yjcH	b4068	0.29	-0.1
4,283,013	-	yjcH	b4068	0.29	+0.4
4,283,050	+	yjcH	b4068	0.41	-0.3
4,283,121	-	yjcH	b4068	0.63	+0.1
4,283,212	-				+0.3
4,283,212	-				+0.0
4,283,218	+				+0.6
4,283,224	-				-0.1
4,283,224	-				+0.1
4,283,291	-				+0.6
4,283,315	-				-0.3
4,283,315	-				+0.7
4,283,395	+				-0.6
4,283,395	+				+0.5
4,283,423	+				-1.0
4,283,423	+				-0.4
4,283,514	+				+0.2
4,283,514	+				-0.2
4,283,595	-				-0.5
4,283,678	-	acs	b4069	0.12	+0.4
4,283,678	-	acs	b4069	0.12	+0.3
4,283,712	+	acs	b4069	0.14	-0.7
4,283,749	-	acs	b4069	0.16	-1.8
4,283,808	+	acs	b4069	0.19	+0.2
4,283,855	+	acs	b4069	0.21	+0.5
4,283,855	+	acs	b4069	0.21	+0.7
4,283,865	+	acs	b4069	0.22	+0.1
4,283,956	+	acs	b4069	0.27	+0.3
4,283,974	-	acs	b4069	0.27	-0.5
4,283,981	-	acs	b4069	0.28	+0.4
4,283,981	-	acs	b4069	0.28	+2.1
4,283,983	+	acs	b4069	0.28	-1.0
4,284,007	-	acs	b4069	0.29	-0.7
4,284,032	-	acs	b4069	0.30	-2.7
4,284,032	-	acs	b4069	0.30	-1.0
4,284,215	+	acs	b4069	0.40	-0.1
4,284,215	+	acs	b4069	0.40	-0.3
4,284,229	-	acs	b4069	0.40	-0.3
4,284,233	+	acs	b4069	0.41	+0.6
4,284,255	-	acs	b4069	0.42	+0.4
4,284,398	-	acs	b4069	0.49	-0.4
4,284,446	-	acs	b4069	0.52	-0.4
4,284,449	-	acs	b4069	0.52	+0.1
4,284,454	-	acs	b4069	0.52	-0.8
4,284,486	+	acs	b4069	0.54	-0.1
4,284,521	-	acs	b4069	0.55	-0.4
4,284,521	-	acs	b4069	0.55	-0.3
4,284,541	+	acs	b4069	0.56	-0.8
4,284,587	-	acs	b4069	0.59	+0.7
4,284,675	-	acs	b4069	0.63	-0.2
4,284,677	+				-0.3
4,284,690	-	acs	b4069	0.64	+0.6
4,284,690	-	acs	b4069	0.64	+1.0
4,284,792	-	acs	b4069	0.69	-0.0
4,284,811	-	acs	b4069	0.70	-0.5
4,284,811	-	acs	b4069	0.70	+0.8
4,284,841	+	acs	b4069	0.72	-1.3
4,284,983	-	acs	b4069	0.79	+0.1
4,285,188	+	acs	b4069	0.89	-0.2
4,285,199	+				-0.5
4,285,326	-				+0.0
4,285,326	-				+0.4
4,285,406	+				+1.0
4,285,695	+				-0.1
4,285,711	+				-0.2
4,285,896	+				+0.1
4,285,948	+	nrfA	b4070	0.11	+0.6
4,285,948	+	nrfA	b4070	0.11	-0.2
4,285,967	+	nrfA	b4070	0.13	+0.9
4,286,025	-	nrfA	b4070	0.17	+0.8
4,286,025	-	nrfA	b4070	0.17	+0.7
4,286,035	+	nrfA	b4070	0.17	+0.4
4,286,035	-	nrfA	b4070	0.17	-0.9
4,286,089	+	nrfA	b4070	0.21	+1.0
4,286,089	+	nrfA	b4070	0.21	-0.3
4,286,107	-	nrfA	b4070	0.22	-0.2
4,286,107	-	nrfA	b4070	0.22	+0.7
4,286,109	-	nrfA	b4070	0.22	+0.0
4,286,135	+	nrfA	b4070	0.24	-1.3
4,286,135	+	nrfA	b4070	0.24	+1.0
4,286,168	-	nrfA	b4070	0.27	-0.4
4,286,168	-	nrfA	b4070	0.27	+0.1
4,286,179	-	nrfA	b4070	0.27	-0.0
4,286,340	-	nrfA	b4070	0.38	+0.0