Experiment: D-Mannose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE41_RS23010 and ABIE41_RS23015 are separated by 51 nucleotides ABIE41_RS23015 and ABIE41_RS23020 are separated by 159 nucleotides ABIE41_RS23020 and ABIE41_RS23025 are separated by 302 nucleotides
ABIE41_RS23010: ABIE41_RS23010 - protein-disulfide reductase DsbD domain-containing protein, at 4,739,499 to 4,740,350
_RS23010
ABIE41_RS23015: ABIE41_RS23015 - peroxiredoxin, at 4,740,402 to 4,740,887
_RS23015
ABIE41_RS23020: ABIE41_RS23020 - sugar O-acetyltransferase, at 4,741,047 to 4,741,601
_RS23020
ABIE41_RS23025: ABIE41_RS23025 - acyltransferase, at 4,741,904 to 4,743,016
_RS23025
Position (kb) 4741
4742 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4
5 at 4740.348 kb on + strand at 4740.349 kb on - strand at 4740.783 kb on + strand, within ABIE41_RS23015 at 4740.984 kb on + strand at 4740.985 kb on - strand at 4741.087 kb on - strand at 4741.149 kb on + strand, within ABIE41_RS23020 at 4741.149 kb on + strand, within ABIE41_RS23020 at 4741.149 kb on + strand, within ABIE41_RS23020 at 4741.150 kb on - strand, within ABIE41_RS23020 at 4741.258 kb on - strand, within ABIE41_RS23020 at 4741.794 kb on + strand at 4741.794 kb on + strand at 4741.794 kb on + strand at 4741.795 kb on - strand at 4741.795 kb on - strand at 4741.834 kb on - strand at 4741.905 kb on + strand at 4741.905 kb on + strand at 4741.905 kb on + strand at 4742.082 kb on - strand, within ABIE41_RS23025 at 4742.082 kb on - strand, within ABIE41_RS23025 at 4742.109 kb on + strand, within ABIE41_RS23025 at 4742.110 kb on - strand, within ABIE41_RS23025 at 4742.110 kb on - strand, within ABIE41_RS23025 at 4742.110 kb on - strand, within ABIE41_RS23025 at 4742.110 kb on - strand, within ABIE41_RS23025 at 4742.141 kb on - strand, within ABIE41_RS23025 at 4742.147 kb on + strand, within ABIE41_RS23025 at 4742.147 kb on + strand, within ABIE41_RS23025 at 4742.147 kb on + strand, within ABIE41_RS23025 at 4742.148 kb on - strand, within ABIE41_RS23025 at 4742.233 kb on + strand, within ABIE41_RS23025 at 4742.321 kb on - strand, within ABIE41_RS23025 at 4742.459 kb on + strand, within ABIE41_RS23025
Per-strain Table
Position Strand Gene LocusTag Fraction D-Mannose (C) remove 4,740,348 + +4.9 4,740,349 - -0.6 4,740,783 + ABIE41_RS23015 0.78 +0.1 4,740,984 + -1.6 4,740,985 - -1.0 4,741,087 - -1.0 4,741,149 + ABIE41_RS23020 0.18 -0.2 4,741,149 + ABIE41_RS23020 0.18 +0.5 4,741,149 + ABIE41_RS23020 0.18 -1.6 4,741,150 - ABIE41_RS23020 0.19 +0.1 4,741,258 - ABIE41_RS23020 0.38 +0.3 4,741,794 + +1.8 4,741,794 + -0.7 4,741,794 + +0.3 4,741,795 - -0.1 4,741,795 - +0.2 4,741,834 - +0.2 4,741,905 + -0.4 4,741,905 + +0.7 4,741,905 + -0.1 4,742,082 - ABIE41_RS23025 0.16 -0.6 4,742,082 - ABIE41_RS23025 0.16 +0.5 4,742,109 + ABIE41_RS23025 0.18 -0.0 4,742,110 - ABIE41_RS23025 0.19 +2.7 4,742,110 - ABIE41_RS23025 0.19 +0.1 4,742,110 - ABIE41_RS23025 0.19 +0.9 4,742,110 - ABIE41_RS23025 0.19 -0.1 4,742,141 - ABIE41_RS23025 0.21 -0.6 4,742,147 + ABIE41_RS23025 0.22 -1.8 4,742,147 + ABIE41_RS23025 0.22 +0.6 4,742,147 + ABIE41_RS23025 0.22 +0.1 4,742,148 - ABIE41_RS23025 0.22 +0.2 4,742,233 + ABIE41_RS23025 0.30 -0.6 4,742,321 - ABIE41_RS23025 0.37 -0.6 4,742,459 + ABIE41_RS23025 0.50 -0.5
Or see this region's nucleotide sequence