Strain Fitness in Bosea sp. OAE506 around ABIE41_RS12155

Experiment: D-Mannose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Mannose (C)
2,484,017	+		ABIE41_RS12150	0.77	+0.2
2,484,017	+		ABIE41_RS12150	0.77	+0.5
2,484,017	+		ABIE41_RS12150	0.77	-0.1
2,484,017	+		ABIE41_RS12150	0.77	+2.1
2,484,017	+		ABIE41_RS12150	0.77	+1.2
2,484,017	+		ABIE41_RS12150	0.77	+1.7
2,484,018	-		ABIE41_RS12150	0.77	-0.3
2,484,018	-		ABIE41_RS12150	0.77	-0.0
2,484,018	-		ABIE41_RS12150	0.77	+0.8
2,484,018	-		ABIE41_RS12150	0.77	+0.8
2,484,177	-		ABIE41_RS12150	0.89	-1.0
2,484,177	-		ABIE41_RS12150	0.89	+1.1
2,484,222	+				+0.9
2,484,222	+				-3.0
2,484,223	-				-1.5
2,484,224	+				-0.3
2,484,225	-				+0.8
2,484,225	-				-0.5
2,484,391	+				+0.3
2,484,391	+				-0.2
2,484,391	+				+0.6
2,484,392	-				-1.4
2,484,392	-				-1.2
2,484,419	+				-0.0
2,484,419	+				-0.6
2,484,419	+				-1.0
2,484,420	-				+0.6
2,484,472	+				+2.2
2,484,473	-				-0.5
2,484,539	+				+0.5
2,484,540	-				+0.6
2,484,540	-				-0.0
2,484,540	-				-0.7
2,484,978	+		ABIE41_RS12155	0.25	-0.5
2,484,979	-		ABIE41_RS12155	0.25	-1.5
2,484,979	-		ABIE41_RS12155	0.25	+0.9
2,485,098	+		ABIE41_RS12155	0.32	+0.1
2,485,099	-		ABIE41_RS12155	0.32	-1.1
2,485,099	-		ABIE41_RS12155	0.32	-0.6
2,485,107	+		ABIE41_RS12155	0.33	+2.3
2,485,107	+		ABIE41_RS12155	0.33	-0.3
2,485,131	+		ABIE41_RS12155	0.34	-0.6
2,485,131	+		ABIE41_RS12155	0.34	+2.3
2,485,131	+		ABIE41_RS12155	0.34	-0.9
2,485,131	+		ABIE41_RS12155	0.34	+0.0
2,485,131	+		ABIE41_RS12155	0.34	-0.3
2,485,131	+		ABIE41_RS12155	0.34	+0.5
2,485,131	+		ABIE41_RS12155	0.34	-1.8
2,485,131	+		ABIE41_RS12155	0.34	-0.1
2,485,131	+		ABIE41_RS12155	0.34	-0.3
2,485,131	+		ABIE41_RS12155	0.34	+1.0
2,485,131	+		ABIE41_RS12155	0.34	-0.6
2,485,131	+		ABIE41_RS12155	0.34	-0.2
2,485,131	+		ABIE41_RS12155	0.34	+0.3
2,485,131	+		ABIE41_RS12155	0.34	-0.3
2,485,132	-		ABIE41_RS12155	0.34	-0.3
2,485,132	-		ABIE41_RS12155	0.34	-0.8
2,485,132	-		ABIE41_RS12155	0.34	-1.3
2,485,132	-		ABIE41_RS12155	0.34	-0.8
2,485,132	-		ABIE41_RS12155	0.34	-0.1
2,485,132	-		ABIE41_RS12155	0.34	-0.4
2,485,132	-		ABIE41_RS12155	0.34	-0.1
2,485,133	+		ABIE41_RS12155	0.34	-1.6
2,485,185	+		ABIE41_RS12155	0.37	+0.2
2,485,186	-		ABIE41_RS12155	0.37	+1.0
2,485,188	-		ABIE41_RS12155	0.38	-1.0
2,485,188	-		ABIE41_RS12155	0.38	-0.6
2,485,188	-		ABIE41_RS12155	0.38	+1.0
2,485,291	-		ABIE41_RS12155	0.44	-0.4
2,485,291	-		ABIE41_RS12155	0.44	+0.5
2,485,314	+		ABIE41_RS12155	0.45	+0.4
2,485,314	+		ABIE41_RS12155	0.45	+0.3
2,485,314	+		ABIE41_RS12155	0.45	+0.9
2,485,314	+		ABIE41_RS12155	0.45	-0.3
2,485,315	-		ABIE41_RS12155	0.45	+0.0
2,485,315	-		ABIE41_RS12155	0.45	-0.5
2,485,315	-		ABIE41_RS12155	0.45	-0.5
2,485,315	-		ABIE41_RS12155	0.45	+0.4
2,485,402	-		ABIE41_RS12155	0.50	-0.1
2,485,525	-		ABIE41_RS12155	0.58	-0.1
2,485,525	-		ABIE41_RS12155	0.58	-0.2
2,485,563	+		ABIE41_RS12155	0.60	-0.3
2,485,563	+		ABIE41_RS12155	0.60	-0.1
2,485,564	-		ABIE41_RS12155	0.60	-0.3
2,485,564	-		ABIE41_RS12155	0.60	-0.5
2,485,564	-		ABIE41_RS12155	0.60	-0.6
2,485,564	-		ABIE41_RS12155	0.60	+0.2
2,485,567	-		ABIE41_RS12155	0.60	+0.7
2,485,567	-		ABIE41_RS12155	0.60	-0.1
2,485,619	+		ABIE41_RS12155	0.63	-0.2
2,485,619	+		ABIE41_RS12155	0.63	-0.4
2,485,619	+		ABIE41_RS12155	0.63	-0.2
2,485,619	+		ABIE41_RS12155	0.63	+0.4
2,485,620	-		ABIE41_RS12155	0.63	+0.3
2,485,620	-		ABIE41_RS12155	0.63	-0.4
2,485,645	-		ABIE41_RS12155	0.65	-0.6
2,485,645	-		ABIE41_RS12155	0.65	+0.4
2,485,869	+		ABIE41_RS12155	0.78	-0.6
2,485,869	+		ABIE41_RS12155	0.78	-1.5
2,485,870	-		ABIE41_RS12155	0.78	+0.6
2,485,921	+		ABIE41_RS12155	0.81	-0.1
2,486,077	-				+0.0
2,486,127	+				+2.2
2,486,128	-				-0.3
2,486,128	-				-1.0
2,486,133	+				-0.0
2,486,133	+				+0.3
2,486,133	+				+0.1
2,486,134	-				+0.1
2,486,151	+				+0.2
2,486,152	-				-0.3
2,486,223	+				+0.0
2,486,261	+				-1.2
2,486,484	+		ABIE41_RS12160	0.20	-0.2
2,486,484	+		ABIE41_RS12160	0.20	+0.1
2,486,484	+		ABIE41_RS12160	0.20	+1.4
2,486,600	-		ABIE41_RS12160	0.32	-0.3
2,486,600	-		ABIE41_RS12160	0.32	-0.2
2,486,748	+		ABIE41_RS12160	0.48	+0.0
2,486,748	+		ABIE41_RS12160	0.48	-0.2
2,486,748	+		ABIE41_RS12160	0.48	-1.1
2,486,748	+		ABIE41_RS12160	0.48	-0.4
2,486,748	+		ABIE41_RS12160	0.48	+0.6
2,486,748	+		ABIE41_RS12160	0.48	+0.3
2,486,749	-		ABIE41_RS12160	0.48	+0.7
2,486,749	-		ABIE41_RS12160	0.48	+0.1
2,486,749	-		ABIE41_RS12160	0.48	-0.9
2,486,749	-		ABIE41_RS12160	0.48	-1.5
2,486,749	-		ABIE41_RS12160	0.48	-0.3
2,486,889	+		ABIE41_RS12160	0.63	-0.4
2,486,986	+		ABIE41_RS12160	0.73	+0.5
2,486,987	-		ABIE41_RS12160	0.73	-0.6
2,486,987	-		ABIE41_RS12160	0.73	+0.4
2,486,987	-		ABIE41_RS12160	0.73	+0.1
2,486,987	-		ABIE41_RS12160	0.73	+0.1
2,486,987	-		ABIE41_RS12160	0.73	+0.2
2,487,120	+		ABIE41_RS12160	0.87	-1.8
2,487,121	-		ABIE41_RS12160	0.87	+1.7
2,487,204	+				-0.8