Experiment: Gly-Glu (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS28040 and ABID97_RS28045 are separated by 263 nucleotides ABID97_RS28045 and ABID97_RS28050 are separated by 31 nucleotides ABID97_RS28050 and ABID97_RS28055 are separated by 47 nucleotides
ABID97_RS28040: ABID97_RS28040 - lysophospholipase, at 525,672 to 526,727
_RS28040
ABID97_RS28045: ABID97_RS28045 - hypothetical protein, at 526,991 to 527,266
_RS28045
ABID97_RS28050: ABID97_RS28050 - CBS domain-containing protein, at 527,298 to 527,735
_RS28050
ABID97_RS28055: ABID97_RS28055 - 2-oxoacid:ferredoxin oxidoreductase subunit beta, at 527,783 to 528,838
_RS28055
Position (kb) 526
527
528 Strain fitness (log2 ratio) -2
-1
0
1
2 at 526.360 kb on + strand, within ABID97_RS28040 at 526.361 kb on - strand, within ABID97_RS28040 at 526.388 kb on - strand, within ABID97_RS28040 at 526.510 kb on + strand, within ABID97_RS28040 at 526.510 kb on + strand, within ABID97_RS28040 at 526.511 kb on - strand, within ABID97_RS28040 at 526.511 kb on - strand, within ABID97_RS28040 at 526.511 kb on - strand, within ABID97_RS28040 at 526.511 kb on - strand, within ABID97_RS28040 at 526.719 kb on - strand at 526.765 kb on - strand at 526.864 kb on + strand at 526.865 kb on - strand at 527.962 kb on - strand, within ABID97_RS28055 at 528.147 kb on + strand, within ABID97_RS28055 at 528.148 kb on - strand, within ABID97_RS28055 at 528.148 kb on - strand, within ABID97_RS28055
Per-strain Table
Position Strand Gene LocusTag Fraction Gly-Glu (C) remove 526,360 + ABID97_RS28040 0.65 +0.2 526,361 - ABID97_RS28040 0.65 -0.8 526,388 - ABID97_RS28040 0.68 -0.2 526,510 + ABID97_RS28040 0.79 +0.0 526,510 + ABID97_RS28040 0.79 +0.6 526,511 - ABID97_RS28040 0.79 -0.0 526,511 - ABID97_RS28040 0.79 +0.2 526,511 - ABID97_RS28040 0.79 -0.5 526,511 - ABID97_RS28040 0.79 +1.9 526,719 - +0.2 526,765 - -0.1 526,864 + +0.7 526,865 - -2.2 527,962 - ABID97_RS28055 0.17 -0.2 528,147 + ABID97_RS28055 0.34 +1.1 528,148 - ABID97_RS28055 0.35 +1.1 528,148 - ABID97_RS28055 0.35 +0.4
Or see this region's nucleotide sequence