Experiment: Gly-Glu (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS22060 and ABID97_RS22065 overlap by 40 nucleotides ABID97_RS22065 and ABID97_RS22070 are separated by 80 nucleotides ABID97_RS22070 and ABID97_RS22075 are separated by 3 nucleotides
ABID97_RS22060: ABID97_RS22060 - MFS transporter, at 4,563,959 to 4,565,254
_RS22060
ABID97_RS22065: ABID97_RS22065 - adenosine deaminase, at 4,565,215 to 4,566,279
_RS22065
ABID97_RS22070: ABID97_RS22070 - c-type cytochrome, at 4,566,360 to 4,566,713
_RS22070
ABID97_RS22075: ABID97_RS22075 - glycoside hydrolase 100 family protein, at 4,566,717 to 4,567,901
_RS22075
Position (kb) 4565
4566
4567 Strain fitness (log2 ratio) -1
0
1 at 4565.007 kb on - strand, within ABID97_RS22060 at 4565.253 kb on - strand at 4565.373 kb on - strand, within ABID97_RS22065 at 4565.612 kb on + strand, within ABID97_RS22065 at 4565.612 kb on + strand, within ABID97_RS22065 at 4565.996 kb on + strand, within ABID97_RS22065 at 4565.997 kb on - strand, within ABID97_RS22065 at 4566.035 kb on + strand, within ABID97_RS22065 at 4566.038 kb on + strand, within ABID97_RS22065 at 4566.038 kb on + strand, within ABID97_RS22065 at 4566.038 kb on + strand, within ABID97_RS22065 at 4566.038 kb on + strand, within ABID97_RS22065 at 4566.038 kb on + strand, within ABID97_RS22065 at 4566.038 kb on + strand, within ABID97_RS22065 at 4566.038 kb on + strand, within ABID97_RS22065 at 4566.039 kb on - strand, within ABID97_RS22065 at 4566.039 kb on - strand at 4566.039 kb on - strand, within ABID97_RS22065 at 4566.039 kb on - strand at 4566.039 kb on - strand, within ABID97_RS22065 at 4566.074 kb on + strand, within ABID97_RS22065 at 4566.074 kb on + strand, within ABID97_RS22065 at 4566.075 kb on - strand, within ABID97_RS22065 at 4566.105 kb on - strand, within ABID97_RS22065 at 4566.350 kb on + strand at 4566.351 kb on - strand at 4566.968 kb on - strand, within ABID97_RS22075 at 4567.003 kb on + strand, within ABID97_RS22075 at 4567.003 kb on + strand, within ABID97_RS22075 at 4567.003 kb on + strand, within ABID97_RS22075 at 4567.004 kb on - strand, within ABID97_RS22075 at 4567.205 kb on - strand, within ABID97_RS22075 at 4567.238 kb on - strand, within ABID97_RS22075 at 4567.265 kb on - strand, within ABID97_RS22075
Per-strain Table
Position Strand Gene LocusTag Fraction Gly-Glu (C) remove 4,565,007 - ABID97_RS22060 0.81 -0.5 4,565,253 - -0.3 4,565,373 - ABID97_RS22065 0.15 -0.8 4,565,612 + ABID97_RS22065 0.37 -1.3 4,565,612 + ABID97_RS22065 0.37 -0.1 4,565,996 + ABID97_RS22065 0.73 -0.4 4,565,997 - ABID97_RS22065 0.73 +0.2 4,566,035 + ABID97_RS22065 0.77 +0.4 4,566,038 + ABID97_RS22065 0.77 +0.7 4,566,038 + ABID97_RS22065 0.77 -0.2 4,566,038 + ABID97_RS22065 0.77 +0.1 4,566,038 + ABID97_RS22065 0.77 +0.1 4,566,038 + ABID97_RS22065 0.77 -0.2 4,566,038 + ABID97_RS22065 0.77 -1.2 4,566,038 + ABID97_RS22065 0.77 -0.7 4,566,039 - ABID97_RS22065 0.77 -0.1 4,566,039 - +1.6 4,566,039 - ABID97_RS22065 0.77 -1.2 4,566,039 - +1.6 4,566,039 - ABID97_RS22065 0.77 -0.9 4,566,074 + ABID97_RS22065 0.81 +0.4 4,566,074 + ABID97_RS22065 0.81 -0.2 4,566,075 - ABID97_RS22065 0.81 -0.7 4,566,105 - ABID97_RS22065 0.84 +0.1 4,566,350 + -0.5 4,566,351 - +0.0 4,566,968 - ABID97_RS22075 0.21 +0.0 4,567,003 + ABID97_RS22075 0.24 -0.1 4,567,003 + ABID97_RS22075 0.24 -1.0 4,567,003 + ABID97_RS22075 0.24 +0.0 4,567,004 - ABID97_RS22075 0.24 -0.1 4,567,205 - ABID97_RS22075 0.41 -0.6 4,567,238 - ABID97_RS22075 0.44 +0.0 4,567,265 - ABID97_RS22075 0.46 +0.2
Or see this region's nucleotide sequence